RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 ALS2Q96Q42 1657 aa25.93■■□□□ 1.74
SMN2-202ENST00000380742 EDC4Q6P2E9 1401 aaKnown RBP25.91■■□□□ 1.74
SMN2-202ENST00000380742 DDX10Q13206 875 aaKnown RBP25.91■■□□□ 1.74
SMN2-202ENST00000380742 NSD3Q9BZ95 1437 aa25.9■■□□□ 1.74
SMN2-202ENST00000380742 SBNO1A3KN83 1393 aa25.9■■□□□ 1.74
SMN2-202ENST00000380742 BRD4O60885 1362 aaPredicted RBP25.9■■□□□ 1.74
SMN2-202ENST00000380742 TTC21BQ7Z4L5 1316 aa25.89■■□□□ 1.74
SMN2-202ENST00000380742 KIF20BQ96Q89 1820 aa25.89■■□□□ 1.74
SMN2-202ENST00000380742 PIK3C2AO00443 1686 aa25.89■■□□□ 1.74
SMN2-202ENST00000380742 PAK3O75914 559 aaPredicted RBP25.88■■□□□ 1.73
SMN2-202ENST00000380742 HSPA1LP34931 641 aa25.87■■□□□ 1.73
SMN2-202ENST00000380742 TNS3Q68CZ2 1445 aa25.87■■□□□ 1.73
SMN2-202ENST00000380742 SPATA31A3Q5VYP0 1347 aa25.87■■□□□ 1.73
SMN2-202ENST00000380742 PER1O15534 1290 aaPredicted RBP25.86■■□□□ 1.73
SMN2-202ENST00000380742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.86■■□□□ 1.73
SMN2-202ENST00000380742 MARF1Q9Y4F3 1742 aaKnown RBP25.85■■□□□ 1.73
SMN2-202ENST00000380742 TTC21AQ8NDW8 1320 aa25.85■■□□□ 1.73
SMN2-202ENST00000380742 LRRC59Q96AG4 307 aaKnown RBP25.84■■□□□ 1.73
SMN2-202ENST00000380742 NME9Q86XW9 330 aa25.82■■□□□ 1.72
SMN2-202ENST00000380742 USP54Q70EL1 1684 aa25.81■■□□□ 1.72
SMN2-202ENST00000380742 LMOD2Q6P5Q4 547 aa25.81■■□□□ 1.72
SMN2-202ENST00000380742 ABTB2Q8N961 1025 aa25.81■■□□□ 1.72
SMN2-202ENST00000380742 KNSTRNQ9Y448 316 aa25.81■■□□□ 1.72
SMN2-202ENST00000380742 SHPRHQ149N8 1683 aa25.81■■□□□ 1.72
SMN2-202ENST00000380742 ANKRD26Q9UPS8 1709 aa25.8■■□□□ 1.72
SMN2-202ENST00000380742 COL22A1Q8NFW1 1626 aaPredicted RBP25.8■■□□□ 1.72
SMN2-202ENST00000380742 CRYBG1Q9Y4K1 1723 aa25.8■■□□□ 1.72
SMN2-202ENST00000380742 ZRANB1Q9UGI0 708 aa25.8■■□□□ 1.72
SMN2-202ENST00000380742 FYB1O15117 783 aa25.79■■□□□ 1.72
SMN2-202ENST00000380742 NUTM2GQ5VZR2 741 aa25.79■■□□□ 1.72
SMN2-202ENST00000380742 ARHGEF10O15013 1369 aa25.79■■□□□ 1.72
SMN2-202ENST00000380742 CGNL1Q0VF96 1302 aa25.78■■□□□ 1.72
SMN2-202ENST00000380742 PNPLA6Q8IY17 1366 aa25.78■■□□□ 1.72
SMN2-202ENST00000380742 ABCA3Q99758 1704 aa25.77■■□□□ 1.72
SMN2-202ENST00000380742 AMER1Q5JTC6 1135 aaPredicted RBP25.77■■□□□ 1.72
SMN2-202ENST00000380742 USP31Q70CQ4 1352 aa25.76■■□□□ 1.71
SMN2-202ENST00000380742 MED1Q15648 1581 aaPredicted RBP25.75■■□□□ 1.71
SMN2-202ENST00000380742 NLRP6P59044 892 aa25.75■■□□□ 1.71
SMN2-202ENST00000380742 GGNBP2Q9H3C7 697 aa25.75■■□□□ 1.71
SMN2-202ENST00000380742 PHRF1Q9P1Y6 1649 aaKnown RBP25.75■■□□□ 1.71
SMN2-202ENST00000380742 OVOS2A0A0J9YW53 1432 aa25.74■■□□□ 1.71
SMN2-202ENST00000380742 OVOS2Q6IE36 1432 aa25.74■■□□□ 1.71
SMN2-202ENST00000380742 JCADQ9P266 1359 aa25.73■■□□□ 1.71
SMN2-202ENST00000380742 PLEKHG5O94827 1062 aa25.72■■□□□ 1.71
SMN2-202ENST00000380742 NLRP13Q86W25 1043 aa25.72■■□□□ 1.71
SMN2-202ENST00000380742 CABLES1Q8TDN4 633 aa25.7■■□□□ 1.71
SMN2-202ENST00000380742 NSD2O96028 1365 aa25.7■■□□□ 1.7
SMN2-202ENST00000380742 NPC1L1Q9UHC9 1359 aa25.7■■□□□ 1.7
SMN2-202ENST00000380742 SLIT3O75094 1523 aa25.7■■□□□ 1.7
SMN2-202ENST00000380742 USP19O94966 1318 aa25.7■■□□□ 1.7
SMN2-202ENST00000380742 CC2D1BQ5T0F9 858 aaKnown RBP25.69■■□□□ 1.7
SMN2-202ENST00000380742 COG3Q96JB2 828 aa25.69■■□□□ 1.7
SMN2-202ENST00000380742 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
SMN2-202ENST00000380742 ILDR1Q86SU0 546 aaPredicted RBP25.65■■□□□ 1.7
SMN2-202ENST00000380742 MAP2P11137 1827 aaKnown RBP25.65■■□□□ 1.7
SMN2-202ENST00000380742 NFAT5O94916 1531 aa25.65■■□□□ 1.7
SMN2-202ENST00000380742 LTN1O94822 1766 aa25.64■■□□□ 1.69
SMN2-202ENST00000380742 GCP02774 474 aa25.63■■□□□ 1.69
SMN2-202ENST00000380742 SOX12O15370 315 aa25.62■■□□□ 1.69
SMN2-202ENST00000380742 MORC1Q86VD1 984 aa25.62■■□□□ 1.69
SMN2-202ENST00000380742 SPATA31A6Q5VVP1 1343 aa25.62■■□□□ 1.69
SMN2-202ENST00000380742 FBLN1P23142 703 aa25.61■■□□□ 1.69
SMN2-202ENST00000380742 NUTM2BA6NNL0 878 aaPredicted RBP25.6■■□□□ 1.69
SMN2-202ENST00000380742 NUTM2EB1AL46 878 aaPredicted RBP25.6■■□□□ 1.69
SMN2-202ENST00000380742 NUTM2AQ8IVF1 878 aaPredicted RBP25.6■■□□□ 1.69
SMN2-202ENST00000380742 KCNH5Q8NCM2 988 aa25.6■■□□□ 1.69
SMN2-202ENST00000380742 LRP6O75581 1613 aa25.6■■□□□ 1.69
SMN2-202ENST00000380742 HAP1P54257 671 aaPredicted RBP25.59■■□□□ 1.69
SMN2-202ENST00000380742 TNNT2P45379 298 aaPredicted RBP25.58■■□□□ 1.69
SMN2-202ENST00000380742 PARD3Q8TEW0 1356 aa25.57■■□□□ 1.68
SMN2-202ENST00000380742 ZC3H6P61129 1189 aaKnown RBP25.56■■□□□ 1.68
SMN2-202ENST00000380742 AATKQ6ZMQ8 1374 aa25.55■■□□□ 1.68
SMN2-202ENST00000380742 COL18A1P39060 1754 aa25.54■■□□□ 1.68
SMN2-202ENST00000380742 RGPD5Q99666 1765 aa25.54■■□□□ 1.68
SMN2-202ENST00000380742 CPDO75976 1380 aa25.54■■□□□ 1.68
SMN2-202ENST00000380742 ADAMTS2O95450 1211 aa25.54■■□□□ 1.68
SMN2-202ENST00000380742 KIAA0232Q92628 1395 aa25.54■■□□□ 1.68
SMN2-202ENST00000380742 PEAK1Q9H792 1746 aa25.54■■□□□ 1.68
SMN2-202ENST00000380742 RRS1Q15050 365 aaKnown RBP25.53■■□□□ 1.68
SMN2-202ENST00000380742 ARHGEF25Q86VW2 580 aa25.53■■□□□ 1.68
SMN2-202ENST00000380742 PRKRIP1Q9H875 184 aaPredicted RBP25.52■■□□□ 1.68
SMN2-202ENST00000380742 COL14A1Q05707 1796 aaKnown RBP25.51■■□□□ 1.67
SMN2-202ENST00000380742 MAP3K19Q56UN5 1328 aa25.51■■□□□ 1.67
SMN2-202ENST00000380742 RALBP1Q15311 655 aa25.51■■□□□ 1.67
SMN2-202ENST00000380742 DIEXFQ68CQ4 756 aaKnown RBP25.51■■□□□ 1.67
SMN2-202ENST00000380742 LMO7Q8WWI1 1683 aa25.5■■□□□ 1.67
SMN2-202ENST00000380742 POLKQ9UBT6 870 aa25.5■■□□□ 1.67
SMN2-202ENST00000380742 PLCH1Q4KWH8 1693 aa25.49■■□□□ 1.67
SMN2-202ENST00000380742 ZBTB7CA1YPR0 619 aa25.49■■□□□ 1.67
SMN2-202ENST00000380742 FAM83GA6ND36 823 aa25.49■■□□□ 1.67
SMN2-202ENST00000380742 CHRNA2Q15822 529 aa25.49■■□□□ 1.67
SMN2-202ENST00000380742 EMILIN1Q9Y6C2 1016 aa25.49■■□□□ 1.67
SMN2-202ENST00000380742 PPP2R1AP30153 589 aa25.48■■□□□ 1.67
SMN2-202ENST00000380742 PRDM11Q9NQV5 511 aa25.48■■□□□ 1.67
SMN2-202ENST00000380742 SMG6Q86US8 1419 aaKnown RBP25.47■■□□□ 1.67
SMN2-202ENST00000380742 ANP32CO43423 234 aa25.46■■□□□ 1.67
SMN2-202ENST00000380742 ABCC6O95255 1503 aa25.44■■□□□ 1.66
SMN2-202ENST00000380742 NWD2Q9ULI1 1742 aa25.44■■□□□ 1.66
SMN2-202ENST00000380742 CAMTA1Q9Y6Y1 1673 aa25.44■■□□□ 1.66
SMN2-202ENST00000380742 PPM1GO15355 546 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms