RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ZRANB1Q9UGI0 708 aa23.05■■□□□ 1.28
THUMPD2-201ENST00000378727 USP6P35125 1406 aa23.04■■□□□ 1.28
THUMPD2-201ENST00000378727 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
THUMPD2-201ENST00000378727 CDCA7LQ96GN5 454 aa23.03■■□□□ 1.28
THUMPD2-201ENST00000378727 NWD1Q149M9 1564 aa23.03■■□□□ 1.28
THUMPD2-201ENST00000378727 MAP2P11137 1827 aaKnown RBP23.02■■□□□ 1.28
THUMPD2-201ENST00000378727 FBLN1P23142 703 aa23.02■■□□□ 1.28
THUMPD2-201ENST00000378727 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
THUMPD2-201ENST00000378727 TTC21BQ7Z4L5 1316 aa23.01■■□□□ 1.27
THUMPD2-201ENST00000378727 ZNF521Q96K83 1311 aa23.01■■□□□ 1.27
THUMPD2-201ENST00000378727 APAF1O14727 1248 aa23.01■■□□□ 1.27
THUMPD2-201ENST00000378727 RBM33Q96EV2 1170 aaKnown RBP23.01■■□□□ 1.27
THUMPD2-201ENST00000378727 SSH2Q76I76 1423 aa23.01■■□□□ 1.27
THUMPD2-201ENST00000378727 KDM4FA0A1W2PPD8 638 aa23.01■■□□□ 1.27
THUMPD2-201ENST00000378727 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
THUMPD2-201ENST00000378727 POLKQ9UBT6 870 aa22.99■■□□□ 1.27
THUMPD2-201ENST00000378727 ADGRL3Q9HAR2 1447 aa22.99■■□□□ 1.27
THUMPD2-201ENST00000378727 COG3Q96JB2 828 aa22.98■■□□□ 1.27
THUMPD2-201ENST00000378727 AATKQ6ZMQ8 1374 aa22.97■■□□□ 1.27
THUMPD2-201ENST00000378727 IQSEC2Q5JU85 1478 aa22.96■■□□□ 1.27
THUMPD2-201ENST00000378727 RUNDC1Q96C34 613 aa22.96■■□□□ 1.27
THUMPD2-201ENST00000378727 U2AF1L5P0DN76 240 aaPredicted RBP22.95■■□□□ 1.26
THUMPD2-201ENST00000378727 IRX6P78412 446 aaPredicted RBP22.95■■□□□ 1.26
THUMPD2-201ENST00000378727 U2AF1Q01081 240 aaKnown RBP eCLIP22.95■■□□□ 1.26
THUMPD2-201ENST00000378727 OVOS2A0A0J9YW53 1432 aa22.95■■□□□ 1.26
THUMPD2-201ENST00000378727 OVOS2Q6IE36 1432 aa22.95■■□□□ 1.26
THUMPD2-201ENST00000378727 NGDNQ8NEJ9 315 aaKnown RBP22.94■■□□□ 1.26
THUMPD2-201ENST00000378727 RNF123Q5XPI4 1314 aa22.94■■□□□ 1.26
THUMPD2-201ENST00000378727 HSPA2P54652 639 aa22.93■■□□□ 1.26
THUMPD2-201ENST00000378727 EMILIN1Q9Y6C2 1016 aa22.93■■□□□ 1.26
THUMPD2-201ENST00000378727 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
THUMPD2-201ENST00000378727 NGEFQ8N5V2 710 aa22.92■■□□□ 1.26
THUMPD2-201ENST00000378727 CDK12Q9NYV4 1490 aaPredicted RBP22.91■■□□□ 1.26
THUMPD2-201ENST00000378727 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
THUMPD2-201ENST00000378727 TTC21AQ8NDW8 1320 aa22.91■■□□□ 1.26
THUMPD2-201ENST00000378727 U2SURPO15042 1029 aaKnown RBP22.91■■□□□ 1.26
THUMPD2-201ENST00000378727 GOLGA2Q08379 1002 aa22.9■■□□□ 1.26
THUMPD2-201ENST00000378727 TCP11L2Q8N4U5 519 aa22.9■■□□□ 1.26
THUMPD2-201ENST00000378727 RRS1Q15050 365 aaKnown RBP22.89■■□□□ 1.25
THUMPD2-201ENST00000378727 LMTK3Q96Q04 1460 aa22.89■■□□□ 1.25
THUMPD2-201ENST00000378727 PIK3C2AO00443 1686 aa22.89■■□□□ 1.25
THUMPD2-201ENST00000378727 STRCP1A6NGW2 1772 aa22.89■■□□□ 1.25
THUMPD2-201ENST00000378727 DUSP27Q5VZP5 1158 aa22.88■■□□□ 1.25
THUMPD2-201ENST00000378727 USP31Q70CQ4 1352 aa22.88■■□□□ 1.25
THUMPD2-201ENST00000378727 PLEKHF1Q96S99 279 aa22.88■■□□□ 1.25
THUMPD2-201ENST00000378727 RCAN3Q9UKA8 241 aa22.87■■□□□ 1.25
THUMPD2-201ENST00000378727 SLFN5Q08AF3 891 aa22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 C14orf37Q86TY3 774 aa22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 PROSER2Q86WR7 435 aaPredicted RBP22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 PHF8Q9UPP1 1060 aa22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 RRP7AQ9Y3A4 280 aaKnown RBP22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 WWC1Q8IX03 1113 aa22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 SPINK5Q9NQ38 1064 aaPredicted RBP22.86■■□□□ 1.25
THUMPD2-201ENST00000378727 TRMT2AQ8IZ69 625 aaKnown RBP22.85■■□□□ 1.25
THUMPD2-201ENST00000378727 NEUROD2Q15784 382 aa22.84■■□□□ 1.25
THUMPD2-201ENST00000378727 MARF1Q9Y4F3 1742 aaKnown RBP22.84■■□□□ 1.25
THUMPD2-201ENST00000378727 IL13P35225 146 aa22.83■■□□□ 1.25
THUMPD2-201ENST00000378727 PEAK1Q9H792 1746 aa22.83■■□□□ 1.24
THUMPD2-201ENST00000378727 STRCQ7RTU9 1775 aa22.82■■□□□ 1.24
THUMPD2-201ENST00000378727 ERICH6BQ5W0A0 696 aa22.82■■□□□ 1.24
THUMPD2-201ENST00000378727 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
THUMPD2-201ENST00000378727 USP54Q70EL1 1684 aa22.82■■□□□ 1.24
THUMPD2-201ENST00000378727 CCDC27Q2M243 656 aa22.81■■□□□ 1.24
THUMPD2-201ENST00000378727 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
THUMPD2-201ENST00000378727 ESCO1Q5FWF5 840 aa22.81■■□□□ 1.24
THUMPD2-201ENST00000378727 FCHSD2O94868 740 aa22.8■■□□□ 1.24
THUMPD2-201ENST00000378727 E9PSI1 815 aa22.79■■□□□ 1.24
THUMPD2-201ENST00000378727 RSPH6AQ9H0K4 717 aa22.79■■□□□ 1.24
THUMPD2-201ENST00000378727 RRP1P56182 461 aaKnown RBP22.78■■□□□ 1.24
THUMPD2-201ENST00000378727 C19orf44Q9H6X5 657 aa22.78■■□□□ 1.24
THUMPD2-201ENST00000378727 TMEM94Q12767 1356 aa22.77■■□□□ 1.24
THUMPD2-201ENST00000378727 ORAI2Q96SN7 254 aa22.77■■□□□ 1.24
THUMPD2-201ENST00000378727 SOX12O15370 315 aa22.77■■□□□ 1.23
THUMPD2-201ENST00000378727 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.23
THUMPD2-201ENST00000378727 NLRP6P59044 892 aa22.77■■□□□ 1.23
THUMPD2-201ENST00000378727 MAPK8IP3Q9UPT6 1336 aa22.76■■□□□ 1.23
THUMPD2-201ENST00000378727 PNNQ9H307 717 aaKnown RBP22.76■■□□□ 1.23
THUMPD2-201ENST00000378727 WDR63Q8IWG1 891 aa22.75■■□□□ 1.23
THUMPD2-201ENST00000378727 PAK3O75914 559 aaPredicted RBP22.75■■□□□ 1.23
THUMPD2-201ENST00000378727 HMOX1P09601 288 aa22.75■■□□□ 1.23
THUMPD2-201ENST00000378727 PRKAR2BP31323 418 aa22.75■■□□□ 1.23
THUMPD2-201ENST00000378727 NUTM2GQ5VZR2 741 aa22.75■■□□□ 1.23
THUMPD2-201ENST00000378727 ABTB2Q8N961 1025 aa22.75■■□□□ 1.23
THUMPD2-201ENST00000378727 MAP3K19Q56UN5 1328 aa22.75■■□□□ 1.23
THUMPD2-201ENST00000378727 C1orf167Q5SNV9 1468 aa22.74■■□□□ 1.23
THUMPD2-201ENST00000378727 NCOA3Q9Y6Q9 1424 aa22.74■■□□□ 1.23
THUMPD2-201ENST00000378727 EIF4A2Q14240 407 aaKnown RBP22.73■■□□□ 1.23
THUMPD2-201ENST00000378727 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
THUMPD2-201ENST00000378727 PSME1Q06323 249 aa22.72■■□□□ 1.23
THUMPD2-201ENST00000378727 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
THUMPD2-201ENST00000378727 PPP4R2Q9NY27 417 aa22.71■■□□□ 1.23
THUMPD2-201ENST00000378727 RGPD1P0DJD0 1748 aa22.71■■□□□ 1.23
THUMPD2-201ENST00000378727 DCCP43146 1447 aa22.71■■□□□ 1.23
THUMPD2-201ENST00000378727 SBNO1A3KN83 1393 aa22.71■■□□□ 1.23
THUMPD2-201ENST00000378727 PHACTR3Q96KR7 559 aa22.7■■□□□ 1.23
THUMPD2-201ENST00000378727 MST1RQ04912 1400 aa22.7■■□□□ 1.22
THUMPD2-201ENST00000378727 XIRP1Q702N8 1843 aaKnown RBP22.7■■□□□ 1.22
THUMPD2-201ENST00000378727 KIF1AQ12756 1690 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms