RNA–Protein interactions for RNA: ENST00000377470.7

SPATC1-201, Transcript of spermatogenesis and centriole associated 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPATC1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATC1-201ENST00000377470 NSD2O96028 1365 aa22.47■■□□□ 1.19
SPATC1-201ENST00000377470 C1orf167Q5SNV9 1468 aa22.47■■□□□ 1.19
SPATC1-201ENST00000377470 XPCQ01831 940 aaPredicted RBP22.46■■□□□ 1.19
SPATC1-201ENST00000377470 MSH6P52701 1360 aa22.45■■□□□ 1.19
SPATC1-201ENST00000377470 CADPS2Q86UW7 1296 aa22.45■■□□□ 1.18
SPATC1-201ENST00000377470 MST1RQ04912 1400 aa22.45■■□□□ 1.18
SPATC1-201ENST00000377470 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.18
SPATC1-201ENST00000377470 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
SPATC1-201ENST00000377470 DDX17Q92841 729 aaKnown RBP22.45■■□□□ 1.18
SPATC1-201ENST00000377470 AKAP12Q02952 1782 aa22.45■■□□□ 1.18
SPATC1-201ENST00000377470 MON2Q7Z3U7 1717 aa22.44■■□□□ 1.18
SPATC1-201ENST00000377470 MTHFSP49914 203 aa22.44■■□□□ 1.18
SPATC1-201ENST00000377470 SENP3-EIF4A1A0A087X0R7 540 aa22.42■■□□□ 1.18
SPATC1-201ENST00000377470 PSME1Q06323 249 aa22.42■■□□□ 1.18
SPATC1-201ENST00000377470 NUTM2GQ5VZR2 741 aa22.42■■□□□ 1.18
SPATC1-201ENST00000377470 ITSN1Q15811 1721 aa22.42■■□□□ 1.18
SPATC1-201ENST00000377470 PAK3O75914 559 aaPredicted RBP22.41■■□□□ 1.18
SPATC1-201ENST00000377470 DCCP43146 1447 aa22.41■■□□□ 1.18
SPATC1-201ENST00000377470 COG3Q96JB2 828 aa22.4■■□□□ 1.18
SPATC1-201ENST00000377470 NRKQ7Z2Y5 1582 aa22.39■■□□□ 1.17
SPATC1-201ENST00000377470 SLAIN2Q9P270 581 aa22.38■■□□□ 1.17
SPATC1-201ENST00000377470 POLKQ9UBT6 870 aa22.37■■□□□ 1.17
SPATC1-201ENST00000377470 TTC21AQ8NDW8 1320 aa22.37■■□□□ 1.17
SPATC1-201ENST00000377470 SOX12O15370 315 aa22.36■■□□□ 1.17
SPATC1-201ENST00000377470 ABTB2Q8N961 1025 aa22.36■■□□□ 1.17
SPATC1-201ENST00000377470 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
SPATC1-201ENST00000377470 ADAMTS8Q9UP79 889 aa22.36■■□□□ 1.17
SPATC1-201ENST00000377470 NLRP6P59044 892 aa22.35■■□□□ 1.17
SPATC1-201ENST00000377470 KRT28Q7Z3Y7 464 aa22.35■■□□□ 1.17
SPATC1-201ENST00000377470 EMILIN1Q9Y6C2 1016 aa22.35■■□□□ 1.17
SPATC1-201ENST00000377470 KIF20BQ96Q89 1820 aa22.35■■□□□ 1.17
SPATC1-201ENST00000377470 BRINP3Q76B58 766 aa22.35■■□□□ 1.17
SPATC1-201ENST00000377470 LTBP4Q8N2S1 1624 aa22.34■■□□□ 1.17
SPATC1-201ENST00000377470 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
SPATC1-201ENST00000377470 HNRNPUQ00839 825 aaKnown RBP eCLIP22.34■■□□□ 1.17
SPATC1-201ENST00000377470 OVOS2A0A0J9YW53 1432 aa22.34■■□□□ 1.17
SPATC1-201ENST00000377470 OVOS2Q6IE36 1432 aa22.34■■□□□ 1.17
SPATC1-201ENST00000377470 PLEKHG5O94827 1062 aa22.31■■□□□ 1.16
SPATC1-201ENST00000377470 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
SPATC1-201ENST00000377470 ANKRD26Q9UPS8 1709 aa22.31■■□□□ 1.16
SPATC1-201ENST00000377470 USP31Q70CQ4 1352 aa22.3■■□□□ 1.16
SPATC1-201ENST00000377470 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
SPATC1-201ENST00000377470 LMOD2Q6P5Q4 547 aa22.29■■□□□ 1.16
SPATC1-201ENST00000377470 AATKQ6ZMQ8 1374 aa22.28■■□□□ 1.16
SPATC1-201ENST00000377470 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.16
SPATC1-201ENST00000377470 PNPLA6Q8IY17 1366 aa22.26■■□□□ 1.15
SPATC1-201ENST00000377470 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
SPATC1-201ENST00000377470 NPHP3Q7Z494 1330 aa22.24■■□□□ 1.15
SPATC1-201ENST00000377470 CCDC146Q8IYE0 955 aa22.23■■□□□ 1.15
SPATC1-201ENST00000377470 MAP3K19Q56UN5 1328 aa22.23■■□□□ 1.15
SPATC1-201ENST00000377470 SALL2Q9Y467 1007 aaPredicted RBP22.23■■□□□ 1.15
SPATC1-201ENST00000377470 COL3A1P02461 1466 aaPredicted RBP22.22■■□□□ 1.15
SPATC1-201ENST00000377470 KIF1AQ12756 1690 aa22.22■■□□□ 1.15
SPATC1-201ENST00000377470 HSP90AB2PQ58FF8 381 aa22.21■■□□□ 1.15
SPATC1-201ENST00000377470 MAP2P11137 1827 aaKnown RBP22.21■■□□□ 1.15
SPATC1-201ENST00000377470 DIAPH1O60610 1272 aaKnown RBP22.2■■□□□ 1.14
SPATC1-201ENST00000377470 MARF1Q9Y4F3 1742 aaKnown RBP22.2■■□□□ 1.14
SPATC1-201ENST00000377470 PXDNQ92626 1479 aa22.19■■□□□ 1.14
SPATC1-201ENST00000377470 U2SURPO15042 1029 aaKnown RBP22.19■■□□□ 1.14
SPATC1-201ENST00000377470 TRPM3Q9HCF6 1732 aaPredicted RBP22.19■■□□□ 1.14
SPATC1-201ENST00000377470 SMG6Q86US8 1419 aaKnown RBP22.19■■□□□ 1.14
SPATC1-201ENST00000377470 U2AF1L5P0DN76 240 aaPredicted RBP22.19■■□□□ 1.14
SPATC1-201ENST00000377470 U2AF1Q01081 240 aaKnown RBP eCLIP22.19■■□□□ 1.14
SPATC1-201ENST00000377470 INSRP06213 1382 aa22.19■■□□□ 1.14
SPATC1-201ENST00000377470 GCP02774 474 aa22.18■■□□□ 1.14
SPATC1-201ENST00000377470 CENPBP07199 599 aaPredicted RBP22.18■■□□□ 1.14
SPATC1-201ENST00000377470 CABLES1Q8TDN4 633 aa22.18■■□□□ 1.14
SPATC1-201ENST00000377470 SHPRHQ149N8 1683 aa22.18■■□□□ 1.14
SPATC1-201ENST00000377470 IL13P35225 146 aa22.18■■□□□ 1.14
SPATC1-201ENST00000377470 SOS2Q07890 1332 aaPredicted RBP22.17■■□□□ 1.14
SPATC1-201ENST00000377470 SPATA31A3Q5VYP0 1347 aa22.17■■□□□ 1.14
SPATC1-201ENST00000377470 BLMP54132 1417 aaPredicted RBP22.17■■□□□ 1.14
SPATC1-201ENST00000377470 SBNO1A3KN83 1393 aa22.16■■□□□ 1.14
SPATC1-201ENST00000377470 PEAK1Q9H792 1746 aa22.14■■□□□ 1.13
SPATC1-201ENST00000377470 AMPHP49418 695 aa22.14■■□□□ 1.13
SPATC1-201ENST00000377470 EIF4A2Q14240 407 aaKnown RBP22.14■■□□□ 1.13
SPATC1-201ENST00000377470 NUDCQ9Y266 331 aa22.14■■□□□ 1.13
SPATC1-201ENST00000377470 CDK12Q9NYV4 1490 aaPredicted RBP22.13■■□□□ 1.13
SPATC1-201ENST00000377470 USP19O94966 1318 aa22.13■■□□□ 1.13
SPATC1-201ENST00000377470 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
SPATC1-201ENST00000377470 ZBTB7CA1YPR0 619 aa22.13■■□□□ 1.13
SPATC1-201ENST00000377470 APAF1O14727 1248 aa22.13■■□□□ 1.13
SPATC1-201ENST00000377470 TNS3Q68CZ2 1445 aa22.12■■□□□ 1.13
SPATC1-201ENST00000377470 HOXC9P31274 260 aa22.12■■□□□ 1.13
SPATC1-201ENST00000377470 KCNH5Q8NCM2 988 aa22.12■■□□□ 1.13
SPATC1-201ENST00000377470 HMOX1P09601 288 aa22.11■■□□□ 1.13
SPATC1-201ENST00000377470 PIP4K2BP78356 416 aa22.11■■□□□ 1.13
SPATC1-201ENST00000377470 ALS2Q96Q42 1657 aa22.11■■□□□ 1.13
SPATC1-201ENST00000377470 ZC3H6P61129 1189 aaKnown RBP22.11■■□□□ 1.13
SPATC1-201ENST00000377470 NFAT5O94916 1531 aa22.1■■□□□ 1.13
SPATC1-201ENST00000377470 USP54Q70EL1 1684 aa22.1■■□□□ 1.13
SPATC1-201ENST00000377470 MED1Q15648 1581 aaPredicted RBP22.1■■□□□ 1.13
SPATC1-201ENST00000377470 PLEKHF1Q96S99 279 aa22.1■■□□□ 1.13
SPATC1-201ENST00000377470 ARHGEF25Q86VW2 580 aa22.09■■□□□ 1.13
SPATC1-201ENST00000377470 FLT4P35916 1363 aa22.09■■□□□ 1.13
SPATC1-201ENST00000377470 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
SPATC1-201ENST00000377470 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
SPATC1-201ENST00000377470 AXIN2Q9Y2T1 843 aa22.07■■□□□ 1.12
SPATC1-201ENST00000377470 RRP7AQ9Y3A4 280 aaKnown RBP22.07■■□□□ 1.12
SPATC1-201ENST00000377470 SLIT3O75094 1523 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms