RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CDC45O75419 566 aa21.74■■□□□ 1.07
CLSTN1-202ENST00000377298 MCTP1Q6DN14 999 aa21.74■■□□□ 1.07
CLSTN1-202ENST00000377298 TSR2Q969E8 191 aaKnown RBP21.74■■□□□ 1.07
CLSTN1-202ENST00000377298 SLC4A2P04920 1241 aa21.74■■□□□ 1.07
CLSTN1-202ENST00000377298 RRS1Q15050 365 aaKnown RBP21.74■■□□□ 1.07
CLSTN1-202ENST00000377298 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
CLSTN1-202ENST00000377298 CTDP1Q9Y5B0 961 aaPredicted RBP21.74■■□□□ 1.07
CLSTN1-202ENST00000377298 DDX49Q9Y6V7 483 aaKnown RBP21.74■■□□□ 1.07
CLSTN1-202ENST00000377298 NINLQ9Y2I6 1382 aa21.73■■□□□ 1.07
CLSTN1-202ENST00000377298 ERICH2A1L162 156 aa21.73■■□□□ 1.07
CLSTN1-202ENST00000377298 IDI1Q13907 227 aa21.73■■□□□ 1.07
CLSTN1-202ENST00000377298 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
CLSTN1-202ENST00000377298 DHX29Q7Z478 1369 aaKnown RBP21.73■■□□□ 1.07
CLSTN1-202ENST00000377298 DCAF8L1A6NGE4 600 aa21.73■■□□□ 1.07
CLSTN1-202ENST00000377298 GNAI2P04899 355 aa21.73■■□□□ 1.07
CLSTN1-202ENST00000377298 WAPLQ7Z5K2 1190 aa21.72■■□□□ 1.07
CLSTN1-202ENST00000377298 CCT4P50991 539 aaKnown RBP21.72■■□□□ 1.07
CLSTN1-202ENST00000377298 RAD21O60216 631 aa21.72■■□□□ 1.07
CLSTN1-202ENST00000377298 ERC1Q8IUD2 1116 aa21.72■■□□□ 1.07
CLSTN1-202ENST00000377298 CNTROBQ8N137 903 aa21.72■■□□□ 1.07
CLSTN1-202ENST00000377298 SLC4A3P48751 1232 aa21.71■■□□□ 1.07
CLSTN1-202ENST00000377298 WASHC4Q2M389 1173 aa21.71■■□□□ 1.07
CLSTN1-202ENST00000377298 DDX54Q8TDD1 881 aaKnown RBP21.71■■□□□ 1.07
CLSTN1-202ENST00000377298 NOB1Q9ULX3 412 aaKnown RBP21.71■■□□□ 1.07
CLSTN1-202ENST00000377298 GCC1Q96CN9 775 aa21.7■■□□□ 1.06
CLSTN1-202ENST00000377298 FBXO31Q5XUX0 539 aaPredicted RBP21.7■■□□□ 1.06
CLSTN1-202ENST00000377298 NFXL1Q6ZNB6 911 aa21.7■■□□□ 1.06
CLSTN1-202ENST00000377298 RALYLQ86SE5 291 aaKnown RBP21.7■■□□□ 1.06
CLSTN1-202ENST00000377298 ZNF428Q96B54 188 aa21.7■■□□□ 1.06
CLSTN1-202ENST00000377298 C22orf23Q9BZE7 217 aa21.7■■□□□ 1.06
CLSTN1-202ENST00000377298 NUTM2BA6NNL0 878 aaPredicted RBP21.69■■□□□ 1.06
CLSTN1-202ENST00000377298 NUTM2EB1AL46 878 aaPredicted RBP21.69■■□□□ 1.06
CLSTN1-202ENST00000377298 NUTM2AQ8IVF1 878 aaPredicted RBP21.69■■□□□ 1.06
CLSTN1-202ENST00000377298 CREBRFQ8IUR6 639 aa21.68■■□□□ 1.06
CLSTN1-202ENST00000377298 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
CLSTN1-202ENST00000377298 ADGRF5Q8IZF2 1346 aa21.68■■□□□ 1.06
CLSTN1-202ENST00000377298 NFE2L2Q16236 605 aa21.67■■□□□ 1.06
CLSTN1-202ENST00000377298 FSD1Q9BTV5 496 aa21.67■■□□□ 1.06
CLSTN1-202ENST00000377298 SRCIN1Q9C0H9 1055 aa21.67■■□□□ 1.06
CLSTN1-202ENST00000377298 CHMP5Q9NZZ3 219 aa21.67■■□□□ 1.06
CLSTN1-202ENST00000377298 GSE1Q14687 1217 aa21.67■■□□□ 1.06
CLSTN1-202ENST00000377298 TBC1D2BQ9UPU7 963 aa21.67■■□□□ 1.06
CLSTN1-202ENST00000377298 DHX16O60231 1041 aaKnown RBP21.67■■□□□ 1.06
CLSTN1-202ENST00000377298 XPCQ01831 940 aaPredicted RBP21.66■■□□□ 1.06
CLSTN1-202ENST00000377298 GPATCH8Q9UKJ3 1502 aaKnown RBP21.66■■□□□ 1.06
CLSTN1-202ENST00000377298 FOXD4L6Q3SYB3 417 aaPredicted RBP21.66■■□□□ 1.06
CLSTN1-202ENST00000377298 FOXD4L3Q6VB84 417 aaPredicted RBP21.66■■□□□ 1.06
CLSTN1-202ENST00000377298 SMC3Q9UQE7 1217 aa21.66■■□□□ 1.06
CLSTN1-202ENST00000377298 AMOTL2Q9Y2J4 779 aa21.66■■□□□ 1.06
CLSTN1-202ENST00000377298 SF3B2Q13435 895 aaKnown RBP21.66■■□□□ 1.06
CLSTN1-202ENST00000377298 ATF7IPQ6VMQ6 1270 aa21.65■■□□□ 1.06
CLSTN1-202ENST00000377298 HIP1O00291 1037 aa21.65■■□□□ 1.06
CLSTN1-202ENST00000377298 TPD52L1Q16890 204 aaPredicted RBP21.65■■□□□ 1.06
CLSTN1-202ENST00000377298 ZC3H6P61129 1189 aaKnown RBP21.65■■□□□ 1.06
CLSTN1-202ENST00000377298 FAM177BA6PVY3 158 aa21.64■■□□□ 1.06
CLSTN1-202ENST00000377298 BCAR3O75815 825 aa21.64■■□□□ 1.06
CLSTN1-202ENST00000377298 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.06
CLSTN1-202ENST00000377298 CCDC27Q2M243 656 aa21.64■■□□□ 1.06
CLSTN1-202ENST00000377298 NUCB2P80303 420 aa21.64■■□□□ 1.05
CLSTN1-202ENST00000377298 WASLO00401 505 aaPredicted RBP21.64■■□□□ 1.05
CLSTN1-202ENST00000377298 PSMA5P28066 241 aa21.64■■□□□ 1.05
CLSTN1-202ENST00000377298 AMER1Q5JTC6 1135 aaPredicted RBP21.63■■□□□ 1.05
CLSTN1-202ENST00000377298 GOLGA6L19H0YKK7 550 aa21.63■■□□□ 1.05
CLSTN1-202ENST00000377298 BECN2A8MW95 431 aa21.63■■□□□ 1.05
CLSTN1-202ENST00000377298 TMPOP42166 694 aaKnown RBP21.63■■□□□ 1.05
CLSTN1-202ENST00000377298 TCEAL9Q9UHQ7 104 aa21.63■■□□□ 1.05
CLSTN1-202ENST00000377298 PLCH2O75038 1416 aa21.63■■□□□ 1.05
CLSTN1-202ENST00000377298 BTBD11A6QL63 1104 aa21.62■■□□□ 1.05
CLSTN1-202ENST00000377298 PHF8Q9UPP1 1060 aa21.62■■□□□ 1.05
CLSTN1-202ENST00000377298 CEBPAP49715 358 aaPredicted RBP21.62■■□□□ 1.05
CLSTN1-202ENST00000377298 PDZRN3Q9UPQ7 1066 aa21.62■■□□□ 1.05
CLSTN1-202ENST00000377298 GNAT3A8MTJ3 354 aa21.62■■□□□ 1.05
CLSTN1-202ENST00000377298 ATP10BO94823 1461 aa21.61■■□□□ 1.05
CLSTN1-202ENST00000377298 SAFBQ15424 915 aaKnown RBP eCLIP21.61■■□□□ 1.05
CLSTN1-202ENST00000377298 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
CLSTN1-202ENST00000377298 RPRD2Q5VT52 1461 aaKnown RBP21.61■■□□□ 1.05
CLSTN1-202ENST00000377298 C14orf93Q9H972 538 aaKnown RBP21.61■■□□□ 1.05
CLSTN1-202ENST00000377298 VPS37CA5D8V6 355 aaPredicted RBP21.6■■□□□ 1.05
CLSTN1-202ENST00000377298 NOS1P29475 1434 aa21.6■■□□□ 1.05
CLSTN1-202ENST00000377298 C1orf115Q9H7X2 142 aa21.6■■□□□ 1.05
CLSTN1-202ENST00000377298 CNNM1Q9NRU3 951 aa21.6■■□□□ 1.05
CLSTN1-202ENST00000377298 CCDC47Q96A33 483 aaKnown RBP21.6■■□□□ 1.05
CLSTN1-202ENST00000377298 SCAF11Q99590 1463 aaKnown RBP21.6■■□□□ 1.05
CLSTN1-202ENST00000377298 MVPQ14764 893 aaKnown RBP21.59■■□□□ 1.05
CLSTN1-202ENST00000377298 CCDC158Q5M9N0 1113 aa21.59■■□□□ 1.05
CLSTN1-202ENST00000377298 CWC22Q9HCG8 908 aaKnown RBP21.59■■□□□ 1.05
CLSTN1-202ENST00000377298 DNAJC2Q99543 621 aaKnown RBP21.58■■□□□ 1.05
CLSTN1-202ENST00000377298 TPM3P06753 285 aa21.58■■□□□ 1.05
CLSTN1-202ENST00000377298 PIP4K2BP78356 416 aa21.58■■□□□ 1.05
CLSTN1-202ENST00000377298 ASXL2Q76L83 1435 aa21.58■■□□□ 1.05
CLSTN1-202ENST00000377298 PES1O00541 588 aaKnown RBP21.58■■□□□ 1.04
CLSTN1-202ENST00000377298 GNL3LQ9NVN8 582 aaKnown RBP21.58■■□□□ 1.04
CLSTN1-202ENST00000377298 HOOK1Q9UJC3 728 aaKnown RBP21.58■■□□□ 1.04
CLSTN1-202ENST00000377298 KDM5BQ9UGL1 1544 aa21.57■■□□□ 1.04
CLSTN1-202ENST00000377298 TPM2P07951 284 aa21.57■■□□□ 1.04
CLSTN1-202ENST00000377298 HMGB2P26583 209 aaKnown RBP21.57■■□□□ 1.04
CLSTN1-202ENST00000377298 MYL6BP14649 208 aa21.57■■□□□ 1.04
CLSTN1-202ENST00000377298 TSR1Q2NL82 804 aaKnown RBP21.57■■□□□ 1.04
CLSTN1-202ENST00000377298 BICD2Q8TD16 824 aa21.57■■□□□ 1.04
CLSTN1-202ENST00000377298 TEX14Q8IWB6 1497 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms