RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 COL3A1P02461 1466 aaPredicted RBP26.29■■□□□ 1.8
VSX1-202ENST00000376709 ARHGAP23Q9P227 1491 aa26.29■■□□□ 1.8
VSX1-202ENST00000376709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.29■■□□□ 1.8
VSX1-202ENST00000376709 SLC26A8Q96RN1 970 aa26.29■■□□□ 1.8
VSX1-202ENST00000376709 ADGRB2O60241 1585 aa26.28■■□□□ 1.8
VSX1-202ENST00000376709 PPIP5K1Q6PFW1 1433 aa26.28■■□□□ 1.8
VSX1-202ENST00000376709 NCBP3Q53F19 620 aaKnown RBP26.26■■□□□ 1.79
VSX1-202ENST00000376709 NUDT16Q96DE0 195 aaKnown RBP26.25■■□□□ 1.79
VSX1-202ENST00000376709 NCKAP5LQ9HCH0 1330 aa26.24■■□□□ 1.79
VSX1-202ENST00000376709 PTPRUQ92729 1446 aa26.24■■□□□ 1.79
VSX1-202ENST00000376709 CANXP27824 592 aaKnown RBP26.23■■□□□ 1.79
VSX1-202ENST00000376709 THEMISQ8N1K5 641 aaPredicted RBP26.23■■□□□ 1.79
VSX1-202ENST00000376709 MAPK8IP3Q9UPT6 1336 aa26.23■■□□□ 1.79
VSX1-202ENST00000376709 DIAPH1O60610 1272 aaKnown RBP26.23■■□□□ 1.79
VSX1-202ENST00000376709 CPSF1Q10570 1443 aaKnown RBP26.22■■□□□ 1.79
VSX1-202ENST00000376709 MYH16Q9H6N6 1097 aa26.22■■□□□ 1.79
VSX1-202ENST00000376709 RIMS1Q86UR5 1692 aaKnown RBP26.21■■□□□ 1.79
VSX1-202ENST00000376709 EDC4Q6P2E9 1401 aaKnown RBP26.21■■□□□ 1.79
VSX1-202ENST00000376709 PLEKHF1Q96S99 279 aa26.21■■□□□ 1.79
VSX1-202ENST00000376709 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.21■■□□□ 1.79
VSX1-202ENST00000376709 PNPLA6Q8IY17 1366 aa26.21■■□□□ 1.79
VSX1-202ENST00000376709 CENPQQ7L2Z9 268 aaPredicted RBP26.2■■□□□ 1.79
VSX1-202ENST00000376709 KDM2BQ8NHM5 1336 aa26.2■■□□□ 1.79
VSX1-202ENST00000376709 MS4A1P11836 297 aa26.2■■□□□ 1.78
VSX1-202ENST00000376709 CCDC61Q9Y6R9 512 aa26.19■■□□□ 1.78
VSX1-202ENST00000376709 PRR36Q9H6K5 1346 aa26.19■■□□□ 1.78
VSX1-202ENST00000376709 CDC42BPGQ6DT37 1551 aa26.19■■□□□ 1.78
VSX1-202ENST00000376709 PPM1GO15355 546 aaPredicted RBP26.19■■□□□ 1.78
VSX1-202ENST00000376709 PDE3AQ14432 1141 aa26.18■■□□□ 1.78
VSX1-202ENST00000376709 TMPOP42166 694 aaKnown RBP26.17■■□□□ 1.78
VSX1-202ENST00000376709 RARSP54136 660 aaKnown RBP26.17■■□□□ 1.78
VSX1-202ENST00000376709 ERICH6Q7L0X2 663 aa26.17■■□□□ 1.78
VSX1-202ENST00000376709 PNNQ9H307 717 aaKnown RBP26.17■■□□□ 1.78
VSX1-202ENST00000376709 FRAT1Q92837 279 aaPredicted RBP26.16■■□□□ 1.78
VSX1-202ENST00000376709 AMOTL2Q9Y2J4 779 aa26.16■■□□□ 1.78
VSX1-202ENST00000376709 TBX22Q9Y458 520 aa26.16■■□□□ 1.78
VSX1-202ENST00000376709 MAP2P11137 1827 aaKnown RBP26.16■■□□□ 1.78
VSX1-202ENST00000376709 CEP170BQ9Y4F5 1589 aaPredicted RBP26.16■■□□□ 1.78
VSX1-202ENST00000376709 ANP32AP39687 249 aaKnown RBP26.15■■□□□ 1.78
VSX1-202ENST00000376709 POLKQ9UBT6 870 aa26.15■■□□□ 1.78
VSX1-202ENST00000376709 FBLN1P23142 703 aa26.14■■□□□ 1.77
VSX1-202ENST00000376709 ITSN1Q15811 1721 aa26.14■■□□□ 1.77
VSX1-202ENST00000376709 MON2Q7Z3U7 1717 aa26.14■■□□□ 1.77
VSX1-202ENST00000376709 NME9Q86XW9 330 aa26.13■■□□□ 1.77
VSX1-202ENST00000376709 PDE4AP27815 886 aa26.13■■□□□ 1.77
VSX1-202ENST00000376709 SKAP1Q86WV1 359 aa26.13■■□□□ 1.77
VSX1-202ENST00000376709 DIP2AQ14689 1571 aa26.12■■□□□ 1.77
VSX1-202ENST00000376709 NUTM2FA1L443 756 aa26.12■■□□□ 1.77
VSX1-202ENST00000376709 ZRANB1Q9UGI0 708 aa26.12■■□□□ 1.77
VSX1-202ENST00000376709 AKAP12Q02952 1782 aa26.11■■□□□ 1.77
VSX1-202ENST00000376709 PANK1Q8TE04 598 aa26.11■■□□□ 1.77
VSX1-202ENST00000376709 TRIM35Q9UPQ4 493 aa26.1■■□□□ 1.77
VSX1-202ENST00000376709 FCHSD2O94868 740 aa26.1■■□□□ 1.77
VSX1-202ENST00000376709 RIPK4P57078 832 aa26.1■■□□□ 1.77
VSX1-202ENST00000376709 PTCH1Q13635 1447 aa26.09■■□□□ 1.77
VSX1-202ENST00000376709 COG3Q96JB2 828 aa26.09■■□□□ 1.77
VSX1-202ENST00000376709 BCL2L13Q9BXK5 485 aa26.09■■□□□ 1.77
VSX1-202ENST00000376709 COG6Q9Y2V7 657 aa26.09■■□□□ 1.77
VSX1-202ENST00000376709 LRRC7Q96NW7 1537 aa26.09■■□□□ 1.77
VSX1-202ENST00000376709 TSR2Q969E8 191 aaKnown RBP26.09■■□□□ 1.77
VSX1-202ENST00000376709 BACH2Q9BYV9 841 aa26.09■■□□□ 1.77
VSX1-202ENST00000376709 NEFMP07197 916 aa26.08■■□□□ 1.77
VSX1-202ENST00000376709 TOPAZ1Q8N9V7 1692 aa26.08■■□□□ 1.77
VSX1-202ENST00000376709 ZNF692Q9BU19 519 aaPredicted RBP26.07■■□□□ 1.76
VSX1-202ENST00000376709 DNAJC5Q9H3Z4 198 aa26.07■■□□□ 1.76
VSX1-202ENST00000376709 EMILIN1Q9Y6C2 1016 aa26.07■■□□□ 1.76
VSX1-202ENST00000376709 ADAMTSL3P82987 1691 aa26.06■■□□□ 1.76
VSX1-202ENST00000376709 CT47B1P0C2W7 299 aaPredicted RBP26.06■■□□□ 1.76
VSX1-202ENST00000376709 PRKAR2BP31323 418 aa26.05■■□□□ 1.76
VSX1-202ENST00000376709 CLUAP1Q96AJ1 413 aa26.05■■□□□ 1.76
VSX1-202ENST00000376709 AATKQ6ZMQ8 1374 aa26.05■■□□□ 1.76
VSX1-202ENST00000376709 CDK12Q9NYV4 1490 aaPredicted RBP26.05■■□□□ 1.76
VSX1-202ENST00000376709 RSPH6AQ9H0K4 717 aa26.05■■□□□ 1.76
VSX1-202ENST00000376709 IL16Q14005 1332 aa26.04■■□□□ 1.76
VSX1-202ENST00000376709 XRN1Q8IZH2 1706 aaKnown RBP26.04■■□□□ 1.76
VSX1-202ENST00000376709 ACEP12821 1306 aa26.03■■□□□ 1.76
VSX1-202ENST00000376709 EXOSC9Q06265 439 aaKnown RBP26.02■■□□□ 1.76
VSX1-202ENST00000376709 IPO9Q96P70 1041 aaKnown RBP26.02■■□□□ 1.76
VSX1-202ENST00000376709 NOP58Q9Y2X3 529 aaKnown RBP26.02■■□□□ 1.76
VSX1-202ENST00000376709 PLEKHG3A1L390 1219 aa26.01■■□□□ 1.75
VSX1-202ENST00000376709 HMOX1P09601 288 aa26.01■■□□□ 1.75
VSX1-202ENST00000376709 NPM2Q86SE8 214 aaKnown RBP26■■□□□ 1.75
VSX1-202ENST00000376709 ZNF142P52746 1687 aaPredicted RBP26■■□□□ 1.75
VSX1-202ENST00000376709 NRKQ7Z2Y5 1582 aa26■■□□□ 1.75
VSX1-202ENST00000376709 KCNA6P17658 529 aa25.99■■□□□ 1.75
VSX1-202ENST00000376709 RRS1Q15050 365 aaKnown RBP25.99■■□□□ 1.75
VSX1-202ENST00000376709 RLBP1P12271 317 aa25.99■■□□□ 1.75
VSX1-202ENST00000376709 IL13P35225 146 aa25.99■■□□□ 1.75
VSX1-202ENST00000376709 TTC21BQ7Z4L5 1316 aa25.98■■□□□ 1.75
VSX1-202ENST00000376709 AAMPQ13685 434 aa25.98■■□□□ 1.75
VSX1-202ENST00000376709 TNNQ9UQP3 1299 aa25.98■■□□□ 1.75
VSX1-202ENST00000376709 PAK3O75914 559 aaPredicted RBP25.97■■□□□ 1.75
VSX1-202ENST00000376709 IGHDP01880 384 aa25.97■■□□□ 1.75
VSX1-202ENST00000376709 ANKLE2Q86XL3 938 aa25.97■■□□□ 1.75
VSX1-202ENST00000376709 SMC4Q9NTJ3 1288 aa25.97■■□□□ 1.75
VSX1-202ENST00000376709 USP6P35125 1406 aa25.97■■□□□ 1.75
VSX1-202ENST00000376709 ZKSCAN2Q63HK3 967 aa25.96■■□□□ 1.75
VSX1-202ENST00000376709 RGS3P49796 1198 aa25.95■■□□□ 1.74
VSX1-202ENST00000376709 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
VSX1-202ENST00000376709 NFE2L2Q16236 605 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms