RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 TNS3Q68CZ2 1445 aa28.89■■■□□ 2.22
HLA-C-201ENST00000376228 SRPK2P78362 688 aaKnown RBP28.89■■■□□ 2.21
HLA-C-201ENST00000376228 CABP2Q9NPB3 220 aa28.88■■■□□ 2.21
HLA-C-201ENST00000376228 MARF1Q9Y4F3 1742 aaKnown RBP28.87■■■□□ 2.21
HLA-C-201ENST00000376228 NGDNQ8NEJ9 315 aaKnown RBP28.87■■■□□ 2.21
HLA-C-201ENST00000376228 YTHDC1Q96MU7 727 aaKnown RBP28.87■■■□□ 2.21
HLA-C-201ENST00000376228 C8orf37Q96NL8 207 aa28.87■■■□□ 2.21
HLA-C-201ENST00000376228 PLEKHG5O94827 1062 aa28.86■■■□□ 2.21
HLA-C-201ENST00000376228 LMOD2Q6P5Q4 547 aa28.85■■■□□ 2.21
HLA-C-201ENST00000376228 PANK3Q9H999 370 aa28.84■■■□□ 2.21
HLA-C-201ENST00000376228 SBNO1A3KN83 1393 aa28.84■■■□□ 2.21
HLA-C-201ENST00000376228 ALS2Q96Q42 1657 aa28.84■■■□□ 2.21
HLA-C-201ENST00000376228 ABCA3Q99758 1704 aa28.83■■■□□ 2.21
HLA-C-201ENST00000376228 RALBP1Q15311 655 aa28.83■■■□□ 2.21
HLA-C-201ENST00000376228 AFF2P51816 1311 aa28.83■■■□□ 2.21
HLA-C-201ENST00000376228 CCDC61Q9Y6R9 512 aa28.82■■■□□ 2.2
HLA-C-201ENST00000376228 PPIP5K1Q6PFW1 1433 aa28.81■■■□□ 2.2
HLA-C-201ENST00000376228 EVC2Q86UK5 1308 aa28.79■■■□□ 2.2
HLA-C-201ENST00000376228 ZNF772Q68DY9 489 aaPredicted RBP28.79■■■□□ 2.2
HLA-C-201ENST00000376228 CABLES1Q8TDN4 633 aa28.79■■■□□ 2.2
HLA-C-201ENST00000376228 ACEP12821 1306 aa28.79■■■□□ 2.2
HLA-C-201ENST00000376228 PARD3Q8TEW0 1356 aa28.78■■■□□ 2.2
HLA-C-201ENST00000376228 PAK3O75914 559 aaPredicted RBP28.78■■■□□ 2.2
HLA-C-201ENST00000376228 NGLY1Q96IV0 654 aa28.78■■■□□ 2.2
HLA-C-201ENST00000376228 POLR3AO14802 1390 aaPredicted RBP28.77■■■□□ 2.2
HLA-C-201ENST00000376228 ARHGEF10O15013 1369 aa28.77■■■□□ 2.2
HLA-C-201ENST00000376228 NPC1L1Q9UHC9 1359 aa28.75■■■□□ 2.19
HLA-C-201ENST00000376228 PLEKHG3A1L390 1219 aa28.75■■■□□ 2.19
HLA-C-201ENST00000376228 SOCS7O14512 581 aa28.74■■■□□ 2.19
HLA-C-201ENST00000376228 HAP1P54257 671 aaPredicted RBP28.73■■■□□ 2.19
HLA-C-201ENST00000376228 CRYBG1Q9Y4K1 1723 aa28.72■■■□□ 2.19
HLA-C-201ENST00000376228 CABP1Q9NZU7 370 aa28.72■■■□□ 2.19
HLA-C-201ENST00000376228 MYBBP1AQ9BQG0 1328 aaKnown RBP28.71■■■□□ 2.19
HLA-C-201ENST00000376228 KNSTRNQ9Y448 316 aa28.69■■■□□ 2.18
HLA-C-201ENST00000376228 CCDC184Q52MB2 194 aa28.69■■■□□ 2.18
HLA-C-201ENST00000376228 MRS2Q9HD23 443 aa28.69■■■□□ 2.18
HLA-C-201ENST00000376228 NINLQ9Y2I6 1382 aa28.68■■■□□ 2.18
HLA-C-201ENST00000376228 USP21Q9UK80 565 aa28.68■■■□□ 2.18
HLA-C-201ENST00000376228 BRD4O60885 1362 aaPredicted RBP28.68■■■□□ 2.18
HLA-C-201ENST00000376228 AKAP12Q02952 1782 aa28.66■■■□□ 2.18
HLA-C-201ENST00000376228 PLCH1Q4KWH8 1693 aa28.66■■■□□ 2.18
HLA-C-201ENST00000376228 AMER1Q5JTC6 1135 aaPredicted RBP28.66■■■□□ 2.18
HLA-C-201ENST00000376228 NUTM2GQ5VZR2 741 aa28.66■■■□□ 2.18
HLA-C-201ENST00000376228 PHRF1Q9P1Y6 1649 aaKnown RBP28.65■■■□□ 2.18
HLA-C-201ENST00000376228 FNBP4Q8N3X1 1017 aaPredicted RBP28.65■■■□□ 2.18
HLA-C-201ENST00000376228 QTRT2Q9H974 415 aaKnown RBP28.65■■■□□ 2.18
HLA-C-201ENST00000376228 ATAD2Q6PL18 1390 aa28.63■■■□□ 2.17
HLA-C-201ENST00000376228 RXRBP28702 533 aa28.63■■■□□ 2.17
HLA-C-201ENST00000376228 BCL9LQ86UU0 1499 aa28.62■■■□□ 2.17
HLA-C-201ENST00000376228 USP6P35125 1406 aa28.61■■■□□ 2.17
HLA-C-201ENST00000376228 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.61■■■□□ 2.17
HLA-C-201ENST00000376228 NLRP13Q86W25 1043 aa28.61■■■□□ 2.17
HLA-C-201ENST00000376228 SLIT2O94813 1529 aa28.6■■■□□ 2.17
HLA-C-201ENST00000376228 ABTB2Q8N961 1025 aa28.59■■■□□ 2.17
HLA-C-201ENST00000376228 CARD14Q9BXL6 1004 aa28.59■■■□□ 2.17
HLA-C-201ENST00000376228 SLC12A5Q9H2X9 1139 aa28.58■■■□□ 2.17
HLA-C-201ENST00000376228 ANKRD36BQ8N2N9 1353 aa28.58■■■□□ 2.17
HLA-C-201ENST00000376228 NWD2Q9ULI1 1742 aa28.57■■■□□ 2.16
HLA-C-201ENST00000376228 ATRNO75882 1429 aa28.57■■■□□ 2.16
HLA-C-201ENST00000376228 CC2D1BQ5T0F9 858 aaKnown RBP28.57■■■□□ 2.16
HLA-C-201ENST00000376228 MON2Q7Z3U7 1717 aa28.57■■■□□ 2.16
HLA-C-201ENST00000376228 TRPC5Q9UL62 973 aaPredicted RBP28.57■■■□□ 2.16
HLA-C-201ENST00000376228 PIK3C2AO00443 1686 aa28.56■■■□□ 2.16
HLA-C-201ENST00000376228 NRKQ7Z2Y5 1582 aa28.56■■■□□ 2.16
HLA-C-201ENST00000376228 FAM83GA6ND36 823 aa28.55■■■□□ 2.16
HLA-C-201ENST00000376228 RBM6P78332 1123 aaKnown RBP28.55■■■□□ 2.16
HLA-C-201ENST00000376228 TMC1Q8TDI8 760 aa28.55■■■□□ 2.16
HLA-C-201ENST00000376228 COL14A1Q05707 1796 aaKnown RBP28.55■■■□□ 2.16
HLA-C-201ENST00000376228 CPSF1Q10570 1443 aaKnown RBP28.53■■■□□ 2.16
HLA-C-201ENST00000376228 SSH2Q76I76 1423 aa28.53■■■□□ 2.16
HLA-C-201ENST00000376228 CNGB1Q14028 1251 aaPredicted RBP28.53■■■□□ 2.16
HLA-C-201ENST00000376228 PNISRQ8TF01 805 aaKnown RBP28.53■■■□□ 2.16
HLA-C-201ENST00000376228 NRAPQ86VF7 1730 aa28.53■■■□□ 2.16
HLA-C-201ENST00000376228 RGS12O14924 1447 aa28.52■■■□□ 2.16
HLA-C-201ENST00000376228 UNC5CLQ8IV45 518 aa28.52■■■□□ 2.16
HLA-C-201ENST00000376228 CD163L1Q9NR16 1453 aa28.52■■■□□ 2.16
HLA-C-201ENST00000376228 CDK12Q9NYV4 1490 aaPredicted RBP28.51■■■□□ 2.15
HLA-C-201ENST00000376228 ZNF692Q9BU19 519 aaPredicted RBP28.5■■■□□ 2.15
HLA-C-201ENST00000376228 NSD3Q9BZ95 1437 aa28.5■■■□□ 2.15
HLA-C-201ENST00000376228 ZC3H6P61129 1189 aaKnown RBP28.49■■■□□ 2.15
HLA-C-201ENST00000376228 KIAA0232Q92628 1395 aa28.49■■■□□ 2.15
HLA-C-201ENST00000376228 USP19O94966 1318 aa28.48■■■□□ 2.15
HLA-C-201ENST00000376228 TTC21BQ7Z4L5 1316 aa28.48■■■□□ 2.15
HLA-C-201ENST00000376228 FAM9BQ8IZU0 186 aa28.48■■■□□ 2.15
HLA-C-201ENST00000376228 PRDM11Q9NQV5 511 aa28.48■■■□□ 2.15
HLA-C-201ENST00000376228 GLI3P10071 1580 aa28.47■■■□□ 2.15
HLA-C-201ENST00000376228 NLRP6P59044 892 aa28.47■■■□□ 2.15
HLA-C-201ENST00000376228 BTG4Q9NY30 223 aa28.47■■■□□ 2.15
HLA-C-201ENST00000376228 NSD2O96028 1365 aa28.47■■■□□ 2.15
HLA-C-201ENST00000376228 INSRP06213 1382 aa28.46■■■□□ 2.15
HLA-C-201ENST00000376228 CHRNA2Q15822 529 aa28.46■■■□□ 2.15
HLA-C-201ENST00000376228 GJD4Q96KN9 370 aaPredicted RBP28.45■■■□□ 2.15
HLA-C-201ENST00000376228 TERF2IPQ9NYB0 399 aa28.45■■■□□ 2.15
HLA-C-201ENST00000376228 PPP2R1AP30153 589 aa28.44■■■□□ 2.14
HLA-C-201ENST00000376228 A0A1W2PP64 1363 aa28.44■■■□□ 2.14
HLA-C-201ENST00000376228 CGNL1Q0VF96 1302 aa28.43■■■□□ 2.14
HLA-C-201ENST00000376228 SLIT3O75094 1523 aa28.43■■■□□ 2.14
HLA-C-201ENST00000376228 HNRNPUQ00839 825 aaKnown RBP eCLIP28.43■■■□□ 2.14
HLA-C-201ENST00000376228 HDGFL2Q7Z4V5 671 aaPredicted RBP28.43■■■□□ 2.14
HLA-C-201ENST00000376228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms