RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 SHPRHQ149N8 1683 aa22.4■■□□□ 1.18
TUBGCP3-202ENST00000375669 RAB3GAP1Q15042 981 aa22.39■■□□□ 1.18
TUBGCP3-202ENST00000375669 TRIM35Q9UPQ4 493 aa22.39■■□□□ 1.18
TUBGCP3-202ENST00000375669 ABCA6Q8N139 1617 aa22.39■■□□□ 1.17
TUBGCP3-202ENST00000375669 SNX21Q969T3 373 aa22.39■■□□□ 1.17
TUBGCP3-202ENST00000375669 STK26Q9P289 416 aa22.39■■□□□ 1.17
TUBGCP3-202ENST00000375669 ELL2O00472 640 aaPredicted RBP22.38■■□□□ 1.17
TUBGCP3-202ENST00000375669 TMPOP42166 694 aaKnown RBP22.38■■□□□ 1.17
TUBGCP3-202ENST00000375669 GGT6Q6P531 493 aa22.38■■□□□ 1.17
TUBGCP3-202ENST00000375669 DDX19BQ9UMR2 479 aa22.37■■□□□ 1.17
TUBGCP3-202ENST00000375669 R3HCC1Q9Y3T6 440 aaKnown RBP22.37■■□□□ 1.17
TUBGCP3-202ENST00000375669 CCDC27Q2M243 656 aa22.37■■□□□ 1.17
TUBGCP3-202ENST00000375669 ZNF518AQ6AHZ1 1483 aa22.36■■□□□ 1.17
TUBGCP3-202ENST00000375669 ABCC1P33527 1531 aa22.36■■□□□ 1.17
TUBGCP3-202ENST00000375669 HDAC1Q13547 482 aaPredicted RBP22.36■■□□□ 1.17
TUBGCP3-202ENST00000375669 ANKRD45Q5TZF3 282 aa22.36■■□□□ 1.17
TUBGCP3-202ENST00000375669 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
TUBGCP3-202ENST00000375669 ZBTB40Q9NUA8 1239 aa22.35■■□□□ 1.17
TUBGCP3-202ENST00000375669 THUMPD2Q9BTF0 503 aaKnown RBP22.34■■□□□ 1.17
TUBGCP3-202ENST00000375669 RBM25P49756 843 aaKnown RBP22.34■■□□□ 1.17
TUBGCP3-202ENST00000375669 SMAP1Q8IYB5 467 aaPredicted RBP22.34■■□□□ 1.17
TUBGCP3-202ENST00000375669 SLC24A1O60721 1099 aa22.33■■□□□ 1.17
TUBGCP3-202ENST00000375669 CD109Q6YHK3 1445 aa22.33■■□□□ 1.17
TUBGCP3-202ENST00000375669 MAP3K4Q9Y6R4 1608 aa22.32■■□□□ 1.16
TUBGCP3-202ENST00000375669 PLEKHF1Q96S99 279 aa22.32■■□□□ 1.16
TUBGCP3-202ENST00000375669 CHD1LQ86WJ1 897 aa22.31■■□□□ 1.16
TUBGCP3-202ENST00000375669 IBTKQ9P2D0 1353 aaPredicted RBP22.31■■□□□ 1.16
TUBGCP3-202ENST00000375669 HS1BP3Q53T59 392 aa22.31■■□□□ 1.16
TUBGCP3-202ENST00000375669 KIF2CQ99661 725 aa22.31■■□□□ 1.16
TUBGCP3-202ENST00000375669 ZFYVE16Q7Z3T8 1539 aa22.31■■□□□ 1.16
TUBGCP3-202ENST00000375669 SSFA2P28290 1259 aa22.3■■□□□ 1.16
TUBGCP3-202ENST00000375669 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
TUBGCP3-202ENST00000375669 A0A0U1RQG5 324 aaPredicted RBP22.3■■□□□ 1.16
TUBGCP3-202ENST00000375669 NUCB1Q02818 461 aa22.3■■□□□ 1.16
TUBGCP3-202ENST00000375669 UQCRHLA0A096LP55 91 aa22.3■■□□□ 1.16
TUBGCP3-202ENST00000375669 UQCRHP07919 91 aa22.3■■□□□ 1.16
TUBGCP3-202ENST00000375669 MTERF4Q7Z6M4 381 aaKnown RBP22.3■■□□□ 1.16
TUBGCP3-202ENST00000375669 C14orf93Q9H972 538 aaKnown RBP22.3■■□□□ 1.16
TUBGCP3-202ENST00000375669 ZNF500O60304 480 aaPredicted RBP22.29■■□□□ 1.16
TUBGCP3-202ENST00000375669 NOL7Q9UMY1 257 aaKnown RBP22.28■■□□□ 1.16
TUBGCP3-202ENST00000375669 GOLGA6L22H0YM25 854 aa22.27■■□□□ 1.16
TUBGCP3-202ENST00000375669 KLHL40Q2TBA0 621 aa22.27■■□□□ 1.16
TUBGCP3-202ENST00000375669 GAS2L2Q8NHY3 880 aa22.27■■□□□ 1.16
TUBGCP3-202ENST00000375669 DDX49Q9Y6V7 483 aaKnown RBP22.26■■□□□ 1.15
TUBGCP3-202ENST00000375669 TBC1D9Q6ZT07 1266 aa22.25■■□□□ 1.15
TUBGCP3-202ENST00000375669 DYNC1I1O14576 645 aa22.25■■□□□ 1.15
TUBGCP3-202ENST00000375669 NCLP19338 710 aaKnown RBP22.24■■□□□ 1.15
TUBGCP3-202ENST00000375669 XPCQ01831 940 aaPredicted RBP22.24■■□□□ 1.15
TUBGCP3-202ENST00000375669 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
TUBGCP3-202ENST00000375669 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
TUBGCP3-202ENST00000375669 ATAD2Q6PL18 1390 aa22.24■■□□□ 1.15
TUBGCP3-202ENST00000375669 HMOX1P09601 288 aa22.24■■□□□ 1.15
TUBGCP3-202ENST00000375669 EVC2Q86UK5 1308 aa22.24■■□□□ 1.15
TUBGCP3-202ENST00000375669 CHAMP1Q96JM3 812 aa22.23■■□□□ 1.15
TUBGCP3-202ENST00000375669 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.23■■□□□ 1.15
TUBGCP3-202ENST00000375669 TET3O43151 1660 aa22.23■■□□□ 1.15
TUBGCP3-202ENST00000375669 CLEC17AQ6ZS10 378 aa22.23■■□□□ 1.15
TUBGCP3-202ENST00000375669 MYOM2P54296 1465 aa22.23■■□□□ 1.15
TUBGCP3-202ENST00000375669 MINK1Q8N4C8 1332 aaPredicted RBP22.23■■□□□ 1.15
TUBGCP3-202ENST00000375669 MROH2AA6NES4 1674 aa22.23■■□□□ 1.15
TUBGCP3-202ENST00000375669 SBNO2Q9Y2G9 1366 aa22.23■■□□□ 1.15
TUBGCP3-202ENST00000375669 ZNF445P59923 1031 aa22.22■■□□□ 1.15
TUBGCP3-202ENST00000375669 APBB1O00213 710 aa22.22■■□□□ 1.15
TUBGCP3-202ENST00000375669 ZCCHC11Q5TAX3 1644 aaKnown RBP22.21■■□□□ 1.15
TUBGCP3-202ENST00000375669 PKP1Q13835 747 aa22.21■■□□□ 1.15
TUBGCP3-202ENST00000375669 PDLIM2Q96JY6 352 aa22.21■■□□□ 1.15
TUBGCP3-202ENST00000375669 A0A1W2PP64 1363 aa22.21■■□□□ 1.15
TUBGCP3-202ENST00000375669 CHD1O14646 1710 aa22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 FYB1O15117 783 aa22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 CSPP1Q1MSJ5 1256 aa22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 SIRT2Q8IXJ6 389 aa22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 ARID3AQ99856 593 aa22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 FANCAO15360 1455 aa22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 ATP7AQ04656 1500 aa22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 K7ELQ4 463 aaPredicted RBP22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 IPO8O15397 1037 aaKnown RBP22.2■■□□□ 1.14
TUBGCP3-202ENST00000375669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.2■■□□□ 1.143e-7■■□□□ 14.1
TUBGCP3-202ENST00000375669 BAG4O95429 457 aaKnown RBP22.19■■□□□ 1.14
TUBGCP3-202ENST00000375669 ANKRD36BQ8N2N9 1353 aa22.18■■□□□ 1.14
TUBGCP3-202ENST00000375669 ZBTB7BO15156 539 aaPredicted RBP22.18■■□□□ 1.14
TUBGCP3-202ENST00000375669 C16orf71Q8IYS4 520 aaPredicted RBP22.18■■□□□ 1.14
TUBGCP3-202ENST00000375669 PHACTR3Q96KR7 559 aa22.18■■□□□ 1.14
TUBGCP3-202ENST00000375669 PRKAR2BP31323 418 aa22.18■■□□□ 1.14
TUBGCP3-202ENST00000375669 BMP2KLQ5H9B9 411 aa22.18■■□□□ 1.14
TUBGCP3-202ENST00000375669 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 PRDM10Q9NQV6 1147 aa22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 ZKSCAN5Q9Y2L8 839 aa22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 PPIP5K1Q6PFW1 1433 aa22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 KIF16BQ96L93 1317 aa22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 DIAPH1O60610 1272 aaKnown RBP22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 CT47B1P0C2W7 299 aaPredicted RBP22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 MCTP1Q6DN14 999 aa22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 ZHX1Q9UKY1 873 aaPredicted RBP22.17■■□□□ 1.14
TUBGCP3-202ENST00000375669 FOXD4L5Q5VV16 416 aaPredicted RBP22.16■■□□□ 1.14
TUBGCP3-202ENST00000375669 FOXD4L4Q8WXT5 416 aaPredicted RBP22.16■■□□□ 1.14
TUBGCP3-202ENST00000375669 SASS6Q6UVJ0 657 aa22.16■■□□□ 1.14
TUBGCP3-202ENST00000375669 RBSNQ9H1K0 784 aa22.16■■□□□ 1.14
TUBGCP3-202ENST00000375669 ARHGAP31Q2M1Z3 1444 aa22.16■■□□□ 1.14
TUBGCP3-202ENST00000375669 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
TUBGCP3-202ENST00000375669 UTP14CQ5TAP6 766 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms