RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 TATP17735 454 aaPredicted RBP20.68■□□□□ 0.9
MCF2L-203ENST00000375604 NINLQ9Y2I6 1382 aa20.68■□□□□ 0.9
MCF2L-203ENST00000375604 PDZRN3Q9UPQ7 1066 aa20.67■□□□□ 0.9
MCF2L-203ENST00000375604 CHMP5Q9NZZ3 219 aa20.67■□□□□ 0.9
MCF2L-203ENST00000375604 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
MCF2L-203ENST00000375604 RBM5P52756 815 aaKnown RBP eCLIP20.67■□□□□ 0.9
MCF2L-203ENST00000375604 GAS2L2Q8NHY3 880 aa20.67■□□□□ 0.9
MCF2L-203ENST00000375604 ZC3H6P61129 1189 aaKnown RBP20.66■□□□□ 0.9
MCF2L-203ENST00000375604 FYCO1Q9BQS8 1478 aa20.66■□□□□ 0.9
MCF2L-203ENST00000375604 ANKRD20A12PQ8NF67 263 aa20.66■□□□□ 0.9
MCF2L-203ENST00000375604 SKIDA1Q1XH10 827 aa20.65■□□□□ 0.9
MCF2L-203ENST00000375604 PIBF1Q8WXW3 757 aa20.65■□□□□ 0.9
MCF2L-203ENST00000375604 HOOK1Q9UJC3 728 aaKnown RBP20.65■□□□□ 0.9
MCF2L-203ENST00000375604 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
MCF2L-203ENST00000375604 TMEM132AQ24JP5 1023 aa20.65■□□□□ 0.9
MCF2L-203ENST00000375604 NBPF8Q3BBV2 869 aa20.65■□□□□ 0.9
MCF2L-203ENST00000375604 HDGFL1Q5TGJ6 251 aa20.65■□□□□ 0.9
MCF2L-203ENST00000375604 RRBP1Q9P2E9 1410 aaKnown RBP20.65■□□□□ 0.9
MCF2L-203ENST00000375604 CLASRPQ8N2M8 674 aaKnown RBP20.64■□□□□ 0.9
MCF2L-203ENST00000375604 CCDC73Q6ZRK6 1079 aa20.64■□□□□ 0.9
MCF2L-203ENST00000375604 ZNF530Q6P9A1 599 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-203ENST00000375604 EPS15P42566 896 aa20.64■□□□□ 0.89
MCF2L-203ENST00000375604 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
MCF2L-203ENST00000375604 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-203ENST00000375604 ZFYVE27Q5T4F4 411 aa20.63■□□□□ 0.89
MCF2L-203ENST00000375604 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
MCF2L-203ENST00000375604 USHBP1Q8N6Y0 703 aa20.63■□□□□ 0.89
MCF2L-203ENST00000375604 AKNAQ7Z591 1439 aa20.62■□□□□ 0.89
MCF2L-203ENST00000375604 IPO7O95373 1038 aaKnown RBP20.62■□□□□ 0.89
MCF2L-203ENST00000375604 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
MCF2L-203ENST00000375604 CASKIN1Q8WXD9 1431 aa20.62■□□□□ 0.89
MCF2L-203ENST00000375604 NEK4P51957 841 aa20.62■□□□□ 0.89
MCF2L-203ENST00000375604 KRI1Q8N9T8 703 aaKnown RBP20.62■□□□□ 0.89
MCF2L-203ENST00000375604 FKBP4Q02790 459 aaKnown RBP eCLIP20.62■□□□□ 0.891e-6■■■■□ 21.9
MCF2L-203ENST00000375604 BRMS1Q9HCU9 246 aa20.62■□□□□ 0.89
MCF2L-203ENST00000375604 MPNDQ8N594 471 aa20.61■□□□□ 0.89
MCF2L-203ENST00000375604 GNAI2P04899 355 aa20.61■□□□□ 0.89
MCF2L-203ENST00000375604 CT47A1Q5JQC4 288 aaPredicted RBP20.61■□□□□ 0.89
MCF2L-203ENST00000375604 CCDC70Q6NSX1 233 aa20.6■□□□□ 0.89
MCF2L-203ENST00000375604 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
MCF2L-203ENST00000375604 BTBD11A6QL63 1104 aa20.6■□□□□ 0.89
MCF2L-203ENST00000375604 FAM13BQ9NYF5 915 aa20.6■□□□□ 0.89
MCF2L-203ENST00000375604 C9orf84Q5VXU9 1444 aa20.6■□□□□ 0.89
MCF2L-203ENST00000375604 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
MCF2L-203ENST00000375604 HSP90AA2PQ14568 343 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-203ENST00000375604 ARAP1Q96P48 1450 aa20.59■□□□□ 0.89
MCF2L-203ENST00000375604 WAPLQ7Z5K2 1190 aa20.59■□□□□ 0.89
MCF2L-203ENST00000375604 CCDC158Q5M9N0 1113 aa20.59■□□□□ 0.89
MCF2L-203ENST00000375604 CCDC184Q52MB2 194 aa20.59■□□□□ 0.89
MCF2L-203ENST00000375604 CAVIN1Q6NZI2 390 aaKnown RBP20.59■□□□□ 0.89
MCF2L-203ENST00000375604 SYNJ1O43426 1573 aa20.58■□□□□ 0.89
MCF2L-203ENST00000375604 NUP133Q8WUM0 1156 aa20.58■□□□□ 0.89
MCF2L-203ENST00000375604 IBSPP21815 317 aaPredicted RBP20.58■□□□□ 0.89
MCF2L-203ENST00000375604 PSMA5P28066 241 aa20.58■□□□□ 0.89
MCF2L-203ENST00000375604 THUMPD2Q9BTF0 503 aaKnown RBP20.58■□□□□ 0.89
MCF2L-203ENST00000375604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.58■□□□□ 0.89
MCF2L-203ENST00000375604 RTEL1-TNFRSF6BF6WH68 1400 aa20.58■□□□□ 0.88
MCF2L-203ENST00000375604 PRPF40AO75400 957 aaKnown RBP20.58■□□□□ 0.88
MCF2L-203ENST00000375604 OLFM4Q6UX06 510 aa20.58■□□□□ 0.88
MCF2L-203ENST00000375604 SDF4Q9BRK5 362 aa20.58■□□□□ 0.88
MCF2L-203ENST00000375604 SNAPC4Q5SXM2 1469 aa20.57■□□□□ 0.88
MCF2L-203ENST00000375604 DCTN1Q14203 1278 aa20.57■□□□□ 0.88
MCF2L-203ENST00000375604 CCAR1Q8IX12 1150 aaKnown RBP20.57■□□□□ 0.88
MCF2L-203ENST00000375604 GNAI3P08754 354 aa20.57■□□□□ 0.88
MCF2L-203ENST00000375604 SF3B2Q13435 895 aaKnown RBP20.56■□□□□ 0.88
MCF2L-203ENST00000375604 ZNF771Q7L3S4 317 aaPredicted RBP20.56■□□□□ 0.88
MCF2L-203ENST00000375604 SMC2O95347 1197 aa20.56■□□□□ 0.88
MCF2L-203ENST00000375604 IL1RAPL2Q9NP60 686 aa20.56■□□□□ 0.88
MCF2L-203ENST00000375604 NFKBIBQ15653 356 aa20.56■□□□□ 0.88
MCF2L-203ENST00000375604 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.56■□□□□ 0.88
MCF2L-203ENST00000375604 BRD4O60885 1362 aaPredicted RBP20.56■□□□□ 0.88
MCF2L-203ENST00000375604 NUCB2P80303 420 aa20.56■□□□□ 0.88
MCF2L-203ENST00000375604 FIBPO43427 364 aa20.55■□□□□ 0.88
MCF2L-203ENST00000375604 THEMISQ8N1K5 641 aaPredicted RBP20.55■□□□□ 0.88
MCF2L-203ENST00000375604 ODF2Q5BJF6 829 aa20.55■□□□□ 0.88
MCF2L-203ENST00000375604 XBP1P17861 261 aa20.54■□□□□ 0.88
MCF2L-203ENST00000375604 SART3Q15020 963 aaKnown RBP20.54■□□□□ 0.88
MCF2L-203ENST00000375604 AACSQ86V21 672 aa20.54■□□□□ 0.88
MCF2L-203ENST00000375604 ZHX3Q9H4I2 956 aa20.54■□□□□ 0.88
MCF2L-203ENST00000375604 SPC24Q8NBT2 197 aa20.54■□□□□ 0.88
MCF2L-203ENST00000375604 MCM10Q7L590 875 aa20.54■□□□□ 0.88
MCF2L-203ENST00000375604 CDK5RAP3Q96JB5 506 aa20.54■□□□□ 0.88
MCF2L-203ENST00000375604 SPG7Q9UQ90 795 aa20.54■□□□□ 0.88
MCF2L-203ENST00000375604 PRDM11Q9NQV5 511 aa20.53■□□□□ 0.88
MCF2L-203ENST00000375604 NUTM1Q86Y26 1132 aa20.53■□□□□ 0.88
MCF2L-203ENST00000375604 CWC27Q6UX04 472 aaKnown RBP20.52■□□□□ 0.88
MCF2L-203ENST00000375604 HSP90AB2PQ58FF8 381 aa20.52■□□□□ 0.88
MCF2L-203ENST00000375604 MPHOSPH8Q99549 860 aa20.52■□□□□ 0.88
MCF2L-203ENST00000375604 LRRCC1Q9C099 1032 aa20.52■□□□□ 0.88
MCF2L-203ENST00000375604 KRT18P05783 430 aaKnown RBP20.52■□□□□ 0.87
MCF2L-203ENST00000375604 CDK13Q14004 1512 aaKnown RBP20.51■□□□□ 0.87
MCF2L-203ENST00000375604 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
MCF2L-203ENST00000375604 ADAMTS2O95450 1211 aa20.51■□□□□ 0.87
MCF2L-203ENST00000375604 SKAP1Q86WV1 359 aa20.51■□□□□ 0.87
MCF2L-203ENST00000375604 CCDC57Q2TAC2 916 aa20.51■□□□□ 0.87
MCF2L-203ENST00000375604 R3HCC1Q9Y3T6 440 aaKnown RBP20.51■□□□□ 0.87
MCF2L-203ENST00000375604 ZSCAN29Q8IWY8 852 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-203ENST00000375604 ANKLE2Q86XL3 938 aa20.51■□□□□ 0.87
MCF2L-203ENST00000375604 OFD1O75665 1012 aa20.5■□□□□ 0.87
MCF2L-203ENST00000375604 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms