RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 GAS2L3Q86XJ1 694 aa14.7□□□□□ -0.06
MCF2L-202ENST00000375597 BCL11BQ9C0K0 894 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-202ENST00000375597 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
MCF2L-202ENST00000375597 ATP10AO60312 1499 aa14.7□□□□□ -0.06
MCF2L-202ENST00000375597 PIK3C2GO75747 1445 aa14.7□□□□□ -0.06
MCF2L-202ENST00000375597 IPO8O15397 1037 aaKnown RBP14.7□□□□□ -0.06
MCF2L-202ENST00000375597 CAVIN1Q6NZI2 390 aaKnown RBP14.7□□□□□ -0.06
MCF2L-202ENST00000375597 ANP32BQ92688 251 aaKnown RBP14.7□□□□□ -0.06
MCF2L-202ENST00000375597 TRIM35Q9UPQ4 493 aa14.7□□□□□ -0.06
MCF2L-202ENST00000375597 DUOX2Q9NRD8 1548 aa14.69□□□□□ -0.06
MCF2L-202ENST00000375597 LARP6Q9BRS8 491 aaKnown RBP14.69□□□□□ -0.06
MCF2L-202ENST00000375597 ERVK-7P63135 1459 aa14.68□□□□□ -0.06
MCF2L-202ENST00000375597 PKP1Q13835 747 aa14.67□□□□□ -0.06
MCF2L-202ENST00000375597 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
MCF2L-202ENST00000375597 HDGFL2Q7Z4V5 671 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-202ENST00000375597 GAS2L2Q8NHY3 880 aa14.67□□□□□ -0.06
MCF2L-202ENST00000375597 RBM27Q9P2N5 1060 aaKnown RBP14.67□□□□□ -0.06
MCF2L-202ENST00000375597 FYB1O15117 783 aa14.67□□□□□ -0.06
MCF2L-202ENST00000375597 IDI1Q13907 227 aa14.67□□□□□ -0.06
MCF2L-202ENST00000375597 HSP90AA2PQ14568 343 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-202ENST00000375597 GBP4Q96PP9 640 aa14.67□□□□□ -0.06
MCF2L-202ENST00000375597 C14orf37Q86TY3 774 aa14.66□□□□□ -0.06
MCF2L-202ENST00000375597 NME9Q86XW9 330 aa14.66□□□□□ -0.06
MCF2L-202ENST00000375597 TERF2IPQ9NYB0 399 aa14.66□□□□□ -0.06
MCF2L-202ENST00000375597 GOLGA6L22H0YM25 854 aa14.66□□□□□ -0.06
MCF2L-202ENST00000375597 CDK19Q9BWU1 502 aa14.66□□□□□ -0.06
MCF2L-202ENST00000375597 MCM10Q7L590 875 aa14.65□□□□□ -0.06
MCF2L-202ENST00000375597 LTV1Q96GA3 475 aaPredicted RBP14.65□□□□□ -0.06
MCF2L-202ENST00000375597 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
MCF2L-202ENST00000375597 TAOK2Q9UL54 1235 aa14.64□□□□□ -0.07
MCF2L-202ENST00000375597 ERBB4Q15303 1308 aa14.64□□□□□ -0.07
MCF2L-202ENST00000375597 ESPNB1AK53 854 aa14.64□□□□□ -0.07
MCF2L-202ENST00000375597 F6X3S4 739 aa14.64□□□□□ -0.07
MCF2L-202ENST00000375597 PRPF40AO75400 957 aaKnown RBP14.64□□□□□ -0.07
MCF2L-202ENST00000375597 C8orf58Q8NAV2 365 aa14.64□□□□□ -0.07
MCF2L-202ENST00000375597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-202ENST00000375597 DDX11L8A8MPP1 907 aa14.64□□□□□ -0.07
MCF2L-202ENST00000375597 PLCH2O75038 1416 aa14.64□□□□□ -0.07
MCF2L-202ENST00000375597 MAP4K4O95819 1239 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-202ENST00000375597 TWISTNBQ3B726 338 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-202ENST00000375597 VGFO15240 615 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-202ENST00000375597 MRE11P49959 708 aa14.63□□□□□ -0.07
MCF2L-202ENST00000375597 TXNDC2Q86VQ3 553 aa14.63□□□□□ -0.07
MCF2L-202ENST00000375597 RILPL2Q969X0 211 aa14.63□□□□□ -0.07
MCF2L-202ENST00000375597 C14orf93Q9H972 538 aaKnown RBP14.63□□□□□ -0.07
MCF2L-202ENST00000375597 GDPD2Q9HCC8 539 aa14.63□□□□□ -0.07
MCF2L-202ENST00000375597 ZBTB40Q9NUA8 1239 aa14.63□□□□□ -0.07
MCF2L-202ENST00000375597 POLR3AO14802 1390 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-202ENST00000375597 TRIM6-TRIM34B2RNG4 842 aa14.63□□□□□ -0.07
MCF2L-202ENST00000375597 PTPRTO14522 1441 aa14.63□□□□□ -0.07
MCF2L-202ENST00000375597 AEBP1Q8IUX7 1158 aa14.62□□□□□ -0.07
MCF2L-202ENST00000375597 ZGPATQ8N5A5 531 aaKnown RBP14.62□□□□□ -0.07
MCF2L-202ENST00000375597 PTMAP06454 111 aaKnown RBP14.62□□□□□ -0.07
MCF2L-202ENST00000375597 IQGAP1P46940 1657 aa14.62□□□□□ -0.07
MCF2L-202ENST00000375597 NASPP49321 788 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-202ENST00000375597 FAM13BQ9NYF5 915 aa14.62□□□□□ -0.07
MCF2L-202ENST00000375597 A0A1W2PP64 1363 aa14.62□□□□□ -0.07
MCF2L-202ENST00000375597 ZCCHC11Q5TAX3 1644 aaKnown RBP14.61□□□□□ -0.07
MCF2L-202ENST00000375597 MADDQ8WXG6 1647 aa14.61□□□□□ -0.07
MCF2L-202ENST00000375597 SYNMO15061 1565 aa14.61□□□□□ -0.07
MCF2L-202ENST00000375597 UHRF1BP1LA0JNW5 1464 aa14.61□□□□□ -0.07
MCF2L-202ENST00000375597 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
MCF2L-202ENST00000375597 MBIPQ9NS73 344 aa14.6□□□□□ -0.07
MCF2L-202ENST00000375597 KIF16BQ96L93 1317 aa14.6□□□□□ -0.07
MCF2L-202ENST00000375597 MSNP26038 577 aaKnown RBP14.6□□□□□ -0.07
MCF2L-202ENST00000375597 CALD1Q05682 793 aaKnown RBP14.6□□□□□ -0.07
MCF2L-202ENST00000375597 EXOC6BQ9Y2D4 811 aa14.6□□□□□ -0.07
MCF2L-202ENST00000375597 NUCB1Q02818 461 aa14.6□□□□□ -0.07
MCF2L-202ENST00000375597 DNTTIP2Q5QJE6 756 aaKnown RBP14.6□□□□□ -0.07
MCF2L-202ENST00000375597 CHMP3Q9Y3E7 222 aa14.6□□□□□ -0.07
MCF2L-202ENST00000375597 R3HCC1Q9Y3T6 440 aaKnown RBP14.6□□□□□ -0.07
MCF2L-202ENST00000375597 FANCAO15360 1455 aa14.59□□□□□ -0.07
MCF2L-202ENST00000375597 K7ELQ4 463 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-202ENST00000375597 SPHKAPQ2M3C7 1700 aa14.59□□□□□ -0.07
MCF2L-202ENST00000375597 ABCC1P33527 1531 aa14.59□□□□□ -0.07
MCF2L-202ENST00000375597 ADGRL1O94910 1474 aa14.59□□□□□ -0.07
MCF2L-202ENST00000375597 CYB5RLQ6IPT4 315 aa14.59□□□□□ -0.07
MCF2L-202ENST00000375597 CEP152O94986 1710 aa14.58□□□□□ -0.07
MCF2L-202ENST00000375597 XPCQ01831 940 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-202ENST00000375597 SULT6B1Q6IMI4 303 aa14.58□□□□□ -0.08
MCF2L-202ENST00000375597 UPF3BQ9BZI7 483 aaKnown RBP14.58□□□□□ -0.08
MCF2L-202ENST00000375597 SMC5Q8IY18 1101 aa14.57□□□□□ -0.08
MCF2L-202ENST00000375597 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
MCF2L-202ENST00000375597 TRPM2O94759 1503 aa14.56□□□□□ -0.08
MCF2L-202ENST00000375597 CLTCL1P53675 1640 aa14.56□□□□□ -0.08
MCF2L-202ENST00000375597 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
MCF2L-202ENST00000375597 SIRT2Q8IXJ6 389 aa14.56□□□□□ -0.08
MCF2L-202ENST00000375597 NEK4P51957 841 aa14.56□□□□□ -0.08
MCF2L-202ENST00000375597 SYCE3A1L190 88 aa14.55□□□□□ -0.08
MCF2L-202ENST00000375597 HDAC1Q13547 482 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-202ENST00000375597 MEIS3Q99687 375 aa14.55□□□□□ -0.08
MCF2L-202ENST00000375597 ANO2Q9NQ90 1003 aa14.55□□□□□ -0.08
MCF2L-202ENST00000375597 CDC45O75419 566 aa14.55□□□□□ -0.08
MCF2L-202ENST00000375597 NGEFQ8N5V2 710 aa14.55□□□□□ -0.08
MCF2L-202ENST00000375597 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.55□□□□□ -0.08
MCF2L-202ENST00000375597 POLKQ9UBT6 870 aa14.55□□□□□ -0.08
MCF2L-202ENST00000375597 FOXO3O43524 673 aa14.54□□□□□ -0.08
MCF2L-202ENST00000375597 PLEKHF1Q96S99 279 aa14.54□□□□□ -0.08
MCF2L-202ENST00000375597 IL1RAPL2Q9NP60 686 aa14.54□□□□□ -0.08
MCF2L-202ENST00000375597 VAMP4O75379 141 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms