RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
PTCH1-203ENST00000375274 LETM1O95202 739 aaPredicted RBP13.9□□□□□ -0.18
PTCH1-203ENST00000375274 TMEM57Q8N5G2 664 aa13.9□□□□□ -0.18
PTCH1-203ENST00000375274 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
PTCH1-203ENST00000375274 TRDNQ13061 729 aa13.9□□□□□ -0.18
PTCH1-203ENST00000375274 PDCP20941 246 aa13.89□□□□□ -0.19
PTCH1-203ENST00000375274 PSMA5P28066 241 aa13.89□□□□□ -0.19
PTCH1-203ENST00000375274 TMPOP42166 694 aaKnown RBP13.89□□□□□ -0.19
PTCH1-203ENST00000375274 PTPN23Q9H3S7 1636 aa13.89□□□□□ -0.19
PTCH1-203ENST00000375274 HMGN5P82970 282 aaKnown RBP13.89□□□□□ -0.19
PTCH1-203ENST00000375274 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
PTCH1-203ENST00000375274 GAS2L2Q8NHY3 880 aa13.89□□□□□ -0.19
PTCH1-203ENST00000375274 NLRP6P59044 892 aa13.89□□□□□ -0.19
PTCH1-203ENST00000375274 GPS2Q13227 327 aa13.89□□□□□ -0.19
PTCH1-203ENST00000375274 CLSTN1O94985 981 aa13.89□□□□□ -0.19
PTCH1-203ENST00000375274 ABCA10Q8WWZ4 1543 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 APPP05067 770 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 SULT6B1Q6IMI4 303 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 SDF4Q9BRK5 362 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 TRIM5Q9C035 493 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 MRC2Q9UBG0 1479 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 MAPKBP1O60336 1514 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 FOSBP53539 338 aa13.88□□□□□ -0.19
PTCH1-203ENST00000375274 NKTRP30414 1462 aaKnown RBP13.87□□□□□ -0.19
PTCH1-203ENST00000375274 A0A0U1RQG5 324 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-203ENST00000375274 AIMP1Q12904 312 aaKnown RBP13.87□□□□□ -0.19
PTCH1-203ENST00000375274 LRPPRCP42704 1394 aaKnown RBP13.87□□□□□ -0.19
PTCH1-203ENST00000375274 FCHSD2O94868 740 aa13.87□□□□□ -0.19
PTCH1-203ENST00000375274 GTF2E1P29083 439 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-203ENST00000375274 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
PTCH1-203ENST00000375274 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
PTCH1-203ENST00000375274 NSD3Q9BZ95 1437 aa13.87□□□□□ -0.19
PTCH1-203ENST00000375274 PSME1Q06323 249 aa13.87□□□□□ -0.19
PTCH1-203ENST00000375274 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
PTCH1-203ENST00000375274 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
PTCH1-203ENST00000375274 SSH1Q8WYL5 1049 aa13.86□□□□□ -0.19
PTCH1-203ENST00000375274 CDK19Q9BWU1 502 aa13.86□□□□□ -0.19
PTCH1-203ENST00000375274 TBC1D2Q9BYX2 928 aa13.86□□□□□ -0.19
PTCH1-203ENST00000375274 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
PTCH1-203ENST00000375274 RBM10P98175 930 aaKnown RBP13.86□□□□□ -0.19
PTCH1-203ENST00000375274 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
PTCH1-203ENST00000375274 WDR33Q9C0J8 1336 aaKnown RBP13.86□□□□□ -0.19
PTCH1-203ENST00000375274 NEUROD6Q96NK8 337 aa13.85□□□□□ -0.19
PTCH1-203ENST00000375274 HOOK1Q9UJC3 728 aaKnown RBP13.85□□□□□ -0.19
PTCH1-203ENST00000375274 RPAP2Q8IXW5 612 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-203ENST00000375274 NUTM2GQ5VZR2 741 aa13.85□□□□□ -0.19
PTCH1-203ENST00000375274 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
PTCH1-203ENST00000375274 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
PTCH1-203ENST00000375274 IPO7O95373 1038 aaKnown RBP13.84□□□□□ -0.19
PTCH1-203ENST00000375274 TEX35Q5T0J7 233 aa13.84□□□□□ -0.19
PTCH1-203ENST00000375274 MNS1Q8NEH6 495 aa13.84□□□□□ -0.19
PTCH1-203ENST00000375274 NAT10Q9H0A0 1025 aaKnown RBP13.84□□□□□ -0.19
PTCH1-203ENST00000375274 SLC52A1Q9NWF4 448 aa13.84□□□□□ -0.19
PTCH1-203ENST00000375274 HDGFL1Q5TGJ6 251 aa13.84□□□□□ -0.19
PTCH1-203ENST00000375274 MPNDQ8N594 471 aa13.84□□□□□ -0.19
PTCH1-203ENST00000375274 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
PTCH1-203ENST00000375274 ARGLU1Q9NWB6 273 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-203ENST00000375274 ANKRD20A12PQ8NF67 263 aa13.83□□□□□ -0.2
PTCH1-203ENST00000375274 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
PTCH1-203ENST00000375274 IFT140Q96RY7 1462 aa13.83□□□□□ -0.2
PTCH1-203ENST00000375274 KINO60870 393 aaKnown RBP13.83□□□□□ -0.2
PTCH1-203ENST00000375274 ZSCAN30Q86W11 494 aa13.83□□□□□ -0.2
PTCH1-203ENST00000375274 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
PTCH1-203ENST00000375274 MARCH6O60337 910 aa13.82□□□□□ -0.2
PTCH1-203ENST00000375274 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
PTCH1-203ENST00000375274 NFXL1Q6ZNB6 911 aa13.82□□□□□ -0.2
PTCH1-203ENST00000375274 BCL11BQ9C0K0 894 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-203ENST00000375274 HIP1O00291 1037 aa13.82□□□□□ -0.2
PTCH1-203ENST00000375274 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
PTCH1-203ENST00000375274 CYP46A1Q9Y6A2 500 aa13.82□□□□□ -0.2
PTCH1-203ENST00000375274 CCDC141Q6ZP82 1450 aa13.81□□□□□ -0.2
PTCH1-203ENST00000375274 CCDC192P0DO97 292 aa13.81□□□□□ -0.2
PTCH1-203ENST00000375274 TXNDC2Q86VQ3 553 aa13.81□□□□□ -0.2
PTCH1-203ENST00000375274 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
PTCH1-203ENST00000375274 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTCH1-203ENST00000375274 WASHC4Q2M389 1173 aa13.81□□□□□ -0.2
PTCH1-203ENST00000375274 SPC24Q8NBT2 197 aa13.81□□□□□ -0.2
PTCH1-203ENST00000375274 THUMPD2Q9BTF0 503 aaKnown RBP13.81□□□□□ -0.2
PTCH1-203ENST00000375274 SRCIN1Q9C0H9 1055 aa13.81□□□□□ -0.2
PTCH1-203ENST00000375274 CCDC70Q6NSX1 233 aa13.81□□□□□ -0.2
PTCH1-203ENST00000375274 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
PTCH1-203ENST00000375274 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
PTCH1-203ENST00000375274 RRP9O43818 475 aaKnown RBP13.8□□□□□ -0.2
PTCH1-203ENST00000375274 IGHDP01880 384 aa13.8□□□□□ -0.2
PTCH1-203ENST00000375274 KRT85P78386 507 aa13.8□□□□□ -0.2
PTCH1-203ENST00000375274 ERC1Q8IUD2 1116 aa13.8□□□□□ -0.2
PTCH1-203ENST00000375274 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
PTCH1-203ENST00000375274 IQGAP2Q13576 1575 aa13.8□□□□□ -0.2
PTCH1-203ENST00000375274 PTPRKQ15262 1439 aa13.8□□□□□ -0.2
PTCH1-203ENST00000375274 ALDH1L2Q3SY69 923 aa13.79□□□□□ -0.2
PTCH1-203ENST00000375274 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
PTCH1-203ENST00000375274 FAM69CQ0P6D2 419 aa13.79□□□□□ -0.2
PTCH1-203ENST00000375274 FMNL2Q96PY5 1086 aa13.79□□□□□ -0.2
PTCH1-203ENST00000375274 TRIM27P14373 513 aa13.79□□□□□ -0.2
PTCH1-203ENST00000375274 ABCC11Q96J66 1382 aa13.78□□□□□ -0.2
PTCH1-203ENST00000375274 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
PTCH1-203ENST00000375274 RRS1Q15050 365 aaKnown RBP13.78□□□□□ -0.2
PTCH1-203ENST00000375274 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-203ENST00000375274 LARP1BQ659C4 914 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms