RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 NUDT16Q96DE0 195 aaKnown RBP21.91■■□□□ 1.1
PHF1-202ENST00000374516 FBLN1P23142 703 aa21.91■■□□□ 1.1
PHF1-202ENST00000374516 PLEKHG1Q9ULL1 1385 aa21.91■■□□□ 1.1
PHF1-202ENST00000374516 TCP11L2Q8N4U5 519 aa21.9■■□□□ 1.1
PHF1-202ENST00000374516 TECPR2O15040 1411 aa21.9■■□□□ 1.1
PHF1-202ENST00000374516 FAM135BQ49AJ0 1406 aa21.9■■□□□ 1.1
PHF1-202ENST00000374516 SIRT1Q96EB6 747 aa21.9■■□□□ 1.1
PHF1-202ENST00000374516 FER1L4A9Z1Z3 1794 aa21.89■■□□□ 1.1
PHF1-202ENST00000374516 PPIP5K1Q6PFW1 1433 aa21.89■■□□□ 1.1
PHF1-202ENST00000374516 WWC1Q8IX03 1113 aa21.89■■□□□ 1.1
PHF1-202ENST00000374516 C20orf194Q5TEA3 1177 aa21.89■■□□□ 1.09
PHF1-202ENST00000374516 NUTM2FA1L443 756 aa21.88■■□□□ 1.09
PHF1-202ENST00000374516 U2SURPO15042 1029 aaKnown RBP21.88■■□□□ 1.09
PHF1-202ENST00000374516 TRMT2AQ8IZ69 625 aaKnown RBP21.88■■□□□ 1.09
PHF1-202ENST00000374516 RTN4Q9NQC3 1192 aaKnown RBP21.88■■□□□ 1.09
PHF1-202ENST00000374516 KDM2BQ8NHM5 1336 aa21.87■■□□□ 1.09
PHF1-202ENST00000374516 CCDC61Q9Y6R9 512 aa21.87■■□□□ 1.09
PHF1-202ENST00000374516 THEMISQ8N1K5 641 aaPredicted RBP21.86■■□□□ 1.09
PHF1-202ENST00000374516 E9PSI1 815 aa21.85■■□□□ 1.09
PHF1-202ENST00000374516 ATP7BP35670 1465 aa21.85■■□□□ 1.09
PHF1-202ENST00000374516 NGEFQ8N5V2 710 aa21.85■■□□□ 1.09
PHF1-202ENST00000374516 MED14O60244 1454 aa21.84■■□□□ 1.09
PHF1-202ENST00000374516 CPS1P31327 1500 aa21.84■■□□□ 1.09
PHF1-202ENST00000374516 ZRANB1Q9UGI0 708 aa21.84■■□□□ 1.09
PHF1-202ENST00000374516 PRR36Q9H6K5 1346 aa21.84■■□□□ 1.09
PHF1-202ENST00000374516 GSE1Q14687 1217 aa21.84■■□□□ 1.09
PHF1-202ENST00000374516 NFKBIBQ15653 356 aa21.84■■□□□ 1.09
PHF1-202ENST00000374516 NME9Q86XW9 330 aa21.84■■□□□ 1.09
PHF1-202ENST00000374516 AMOTL2Q9Y2J4 779 aa21.84■■□□□ 1.09
PHF1-202ENST00000374516 CENPQQ7L2Z9 268 aaPredicted RBP21.83■■□□□ 1.09
PHF1-202ENST00000374516 KNDC1Q76NI1 1749 aa21.83■■□□□ 1.09
PHF1-202ENST00000374516 PTPRUQ92729 1446 aa21.83■■□□□ 1.09
PHF1-202ENST00000374516 CPSF1Q10570 1443 aaKnown RBP21.82■■□□□ 1.08
PHF1-202ENST00000374516 SLC4A3P48751 1232 aa21.81■■□□□ 1.08
PHF1-202ENST00000374516 SLIT1O75093 1534 aa21.8■■□□□ 1.08
PHF1-202ENST00000374516 ARHGAP23Q9P227 1491 aa21.8■■□□□ 1.08
PHF1-202ENST00000374516 POLKQ9UBT6 870 aa21.8■■□□□ 1.08
PHF1-202ENST00000374516 DAXXQ9UER7 740 aaPredicted RBP21.8■■□□□ 1.08
PHF1-202ENST00000374516 NKTRP30414 1462 aaKnown RBP21.8■■□□□ 1.08
PHF1-202ENST00000374516 ANKRD26Q9UPS8 1709 aa21.79■■□□□ 1.08
PHF1-202ENST00000374516 DIAPH1O60610 1272 aaKnown RBP21.79■■□□□ 1.08
PHF1-202ENST00000374516 FAM161AQ3B820 660 aa21.79■■□□□ 1.08
PHF1-202ENST00000374516 TBX22Q9Y458 520 aa21.79■■□□□ 1.08
PHF1-202ENST00000374516 IQSEC2Q5JU85 1478 aa21.79■■□□□ 1.08
PHF1-202ENST00000374516 EDC4Q6P2E9 1401 aaKnown RBP21.79■■□□□ 1.08
PHF1-202ENST00000374516 KIF20BQ96Q89 1820 aa21.78■■□□□ 1.08
PHF1-202ENST00000374516 COL3A1P02461 1466 aaPredicted RBP21.78■■□□□ 1.08
PHF1-202ENST00000374516 BCAR3O75815 825 aa21.78■■□□□ 1.08
PHF1-202ENST00000374516 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.77■■□□□ 1.08
PHF1-202ENST00000374516 PRKCSHP14314 528 aaPredicted RBP21.77■■□□□ 1.08
PHF1-202ENST00000374516 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
PHF1-202ENST00000374516 C8orf34Q49A92 452 aa21.77■■□□□ 1.07
PHF1-202ENST00000374516 PLEKHF1Q96S99 279 aa21.76■■□□□ 1.07
PHF1-202ENST00000374516 EMILIN1Q9Y6C2 1016 aa21.76■■□□□ 1.07
PHF1-202ENST00000374516 PNPLA6Q8IY17 1366 aa21.75■■□□□ 1.07
PHF1-202ENST00000374516 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
PHF1-202ENST00000374516 COG3Q96JB2 828 aa21.74■■□□□ 1.07
PHF1-202ENST00000374516 ZNF692Q9BU19 519 aaPredicted RBP21.74■■□□□ 1.07
PHF1-202ENST00000374516 BRPF3Q9ULD4 1205 aa21.74■■□□□ 1.07
PHF1-202ENST00000374516 ACEP12821 1306 aa21.73■■□□□ 1.07
PHF1-202ENST00000374516 CCDC27Q2M243 656 aa21.73■■□□□ 1.07
PHF1-202ENST00000374516 WDR63Q8IWG1 891 aa21.73■■□□□ 1.07
PHF1-202ENST00000374516 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.73■■□□□ 1.07
PHF1-202ENST00000374516 MAPK8IP3Q9UPT6 1336 aa21.72■■□□□ 1.07
PHF1-202ENST00000374516 RRS1Q15050 365 aaKnown RBP21.72■■□□□ 1.07
PHF1-202ENST00000374516 FRAT1Q92837 279 aaPredicted RBP21.72■■□□□ 1.07
PHF1-202ENST00000374516 TMPOP42166 694 aaKnown RBP21.71■■□□□ 1.07
PHF1-202ENST00000374516 RIMS1Q86UR5 1692 aaKnown RBP21.7■■□□□ 1.06
PHF1-202ENST00000374516 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
PHF1-202ENST00000374516 KCNA6P17658 529 aa21.69■■□□□ 1.06
PHF1-202ENST00000374516 MAP2P11137 1827 aaKnown RBP21.68■■□□□ 1.06
PHF1-202ENST00000374516 PLEKHG3A1L390 1219 aa21.68■■□□□ 1.06
PHF1-202ENST00000374516 HMOX1P09601 288 aa21.68■■□□□ 1.06
PHF1-202ENST00000374516 CEP170BQ9Y4F5 1589 aaPredicted RBP21.68■■□□□ 1.06
PHF1-202ENST00000374516 ADGRB2O60241 1585 aa21.67■■□□□ 1.06
PHF1-202ENST00000374516 TTC21BQ7Z4L5 1316 aa21.67■■□□□ 1.06
PHF1-202ENST00000374516 TRIM35Q9UPQ4 493 aa21.67■■□□□ 1.06
PHF1-202ENST00000374516 RIPK4P57078 832 aa21.67■■□□□ 1.06
PHF1-202ENST00000374516 RGS3P49796 1198 aa21.66■■□□□ 1.06
PHF1-202ENST00000374516 MON2Q7Z3U7 1717 aa21.66■■□□□ 1.06
PHF1-202ENST00000374516 PRKAR2BP31323 418 aa21.66■■□□□ 1.06
PHF1-202ENST00000374516 FCHSD2O94868 740 aa21.65■■□□□ 1.06
PHF1-202ENST00000374516 TSR2Q969E8 191 aaKnown RBP21.65■■□□□ 1.06
PHF1-202ENST00000374516 PTCH1Q13635 1447 aa21.65■■□□□ 1.06
PHF1-202ENST00000374516 ITSN1Q15811 1721 aa21.64■■□□□ 1.06
PHF1-202ENST00000374516 ANKLE2Q86XL3 938 aa21.64■■□□□ 1.05
PHF1-202ENST00000374516 RSPH6AQ9H0K4 717 aa21.64■■□□□ 1.05
PHF1-202ENST00000374516 MYH16Q9H6N6 1097 aa21.64■■□□□ 1.05
PHF1-202ENST00000374516 AKAP12Q02952 1782 aa21.64■■□□□ 1.05
PHF1-202ENST00000374516 SOX12O15370 315 aa21.63■■□□□ 1.05
PHF1-202ENST00000374516 FRAT2O75474 233 aaPredicted RBP21.63■■□□□ 1.05
PHF1-202ENST00000374516 IL13P35225 146 aa21.63■■□□□ 1.05
PHF1-202ENST00000374516 NCBP3Q53F19 620 aaKnown RBP21.63■■□□□ 1.05
PHF1-202ENST00000374516 RBM33Q96EV2 1170 aaKnown RBP21.63■■□□□ 1.05
PHF1-202ENST00000374516 BCL2L13Q9BXK5 485 aa21.63■■□□□ 1.05
PHF1-202ENST00000374516 PNNQ9H307 717 aaKnown RBP21.63■■□□□ 1.05
PHF1-202ENST00000374516 AATKQ6ZMQ8 1374 aa21.63■■□□□ 1.05
PHF1-202ENST00000374516 RARSP54136 660 aaKnown RBP21.62■■□□□ 1.05
PHF1-202ENST00000374516 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
PHF1-202ENST00000374516 USP6P35125 1406 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms