RNA–Protein interactions for RNA: ENST00000373991.3

SCAND1-202, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-202ENST00000373991 PXDNQ92626 1479 aa30.3■■■□□ 2.44
SCAND1-202ENST00000373991 BRD4O60885 1362 aaPredicted RBP30.3■■■□□ 2.44
SCAND1-202ENST00000373991 CGNL1Q0VF96 1302 aa30.3■■■□□ 2.44
SCAND1-202ENST00000373991 NHSL1Q5SYE7 1610 aa30.28■■■□□ 2.44
SCAND1-202ENST00000373991 CNGB1Q14028 1251 aaPredicted RBP30.28■■■□□ 2.44
SCAND1-202ENST00000373991 NME9Q86XW9 330 aa30.28■■■□□ 2.44
SCAND1-202ENST00000373991 TTC21AQ8NDW8 1320 aa30.28■■■□□ 2.44
SCAND1-202ENST00000373991 AMER1Q5JTC6 1135 aaPredicted RBP30.27■■■□□ 2.44
SCAND1-202ENST00000373991 LMOD2Q6P5Q4 547 aa30.27■■■□□ 2.44
SCAND1-202ENST00000373991 FYB1O15117 783 aa30.27■■■□□ 2.44
SCAND1-202ENST00000373991 ABTB2Q8N961 1025 aa30.27■■■□□ 2.44
SCAND1-202ENST00000373991 SBNO1A3KN83 1393 aa30.26■■■□□ 2.43
SCAND1-202ENST00000373991 NRKQ7Z2Y5 1582 aa30.26■■■□□ 2.43
SCAND1-202ENST00000373991 AHDC1Q5TGY3 1603 aaPredicted RBP30.26■■■□□ 2.43
SCAND1-202ENST00000373991 CC2D1BQ5T0F9 858 aaKnown RBP30.24■■■□□ 2.43
SCAND1-202ENST00000373991 GGNBP2Q9H3C7 697 aa30.24■■■□□ 2.43
SCAND1-202ENST00000373991 NUTM2GQ5VZR2 741 aa30.23■■■□□ 2.43
SCAND1-202ENST00000373991 DIEXFQ68CQ4 756 aaKnown RBP30.23■■■□□ 2.43
SCAND1-202ENST00000373991 ZRANB1Q9UGI0 708 aa30.23■■■□□ 2.43
SCAND1-202ENST00000373991 SPATA31A3Q5VYP0 1347 aa30.23■■■□□ 2.43
SCAND1-202ENST00000373991 TRPM3Q9HCF6 1732 aaPredicted RBP30.22■■■□□ 2.43
SCAND1-202ENST00000373991 LRRC59Q96AG4 307 aaKnown RBP30.22■■■□□ 2.43
SCAND1-202ENST00000373991 NLRP6P59044 892 aa30.21■■■□□ 2.43
SCAND1-202ENST00000373991 TNS3Q68CZ2 1445 aa30.2■■■□□ 2.43
SCAND1-202ENST00000373991 PHLPP1O60346 1717 aa30.19■■■□□ 2.42
SCAND1-202ENST00000373991 NPC1L1Q9UHC9 1359 aa30.18■■■□□ 2.42
SCAND1-202ENST00000373991 COG3Q96JB2 828 aa30.17■■■□□ 2.42
SCAND1-202ENST00000373991 PLEKHG5O94827 1062 aa30.16■■■□□ 2.42
SCAND1-202ENST00000373991 NSD2O96028 1365 aa30.16■■■□□ 2.42
SCAND1-202ENST00000373991 NLRP13Q86W25 1043 aa30.16■■■□□ 2.42
SCAND1-202ENST00000373991 PIK3C2AO00443 1686 aa30.15■■■□□ 2.42
SCAND1-202ENST00000373991 ARHGEF10O15013 1369 aa30.15■■■□□ 2.42
SCAND1-202ENST00000373991 HSPA1LP34931 641 aa30.15■■■□□ 2.42
SCAND1-202ENST00000373991 USP31Q70CQ4 1352 aa30.14■■■□□ 2.42
SCAND1-202ENST00000373991 MORC1Q86VD1 984 aa30.14■■■□□ 2.42
SCAND1-202ENST00000373991 COL16A1Q07092 1604 aaPredicted RBP30.13■■■□□ 2.41
SCAND1-202ENST00000373991 ALS2Q96Q42 1657 aa30.13■■■□□ 2.41
SCAND1-202ENST00000373991 FBXO41Q8TF61 875 aa30.13■■■□□ 2.41
SCAND1-202ENST00000373991 KIF20BQ96Q89 1820 aa30.13■■■□□ 2.41
SCAND1-202ENST00000373991 ANP32CO43423 234 aa30.1■■■□□ 2.41
SCAND1-202ENST00000373991 TNNT2P45379 298 aaPredicted RBP30.1■■■□□ 2.41
SCAND1-202ENST00000373991 OVOS2A0A0J9YW53 1432 aa30.1■■■□□ 2.41
SCAND1-202ENST00000373991 OVOS2Q6IE36 1432 aa30.1■■■□□ 2.41
SCAND1-202ENST00000373991 CABLES1Q8TDN4 633 aa30.08■■■□□ 2.41
SCAND1-202ENST00000373991 SOX12O15370 315 aa30.08■■■□□ 2.41
SCAND1-202ENST00000373991 PRKRIP1Q9H875 184 aaPredicted RBP30.08■■■□□ 2.41
SCAND1-202ENST00000373991 PNPLA6Q8IY17 1366 aa30.05■■■□□ 2.4
SCAND1-202ENST00000373991 RALBP1Q15311 655 aa30.05■■■□□ 2.4
SCAND1-202ENST00000373991 USP19O94966 1318 aa30.05■■■□□ 2.4
SCAND1-202ENST00000373991 PARD3Q8TEW0 1356 aa30.04■■■□□ 2.4
SCAND1-202ENST00000373991 FBLN1P23142 703 aa30.04■■■□□ 2.4
SCAND1-202ENST00000373991 ANKRD26Q9UPS8 1709 aa30.03■■■□□ 2.4
SCAND1-202ENST00000373991 GCP02774 474 aa30.02■■■□□ 2.4
SCAND1-202ENST00000373991 KCNH5Q8NCM2 988 aa30.02■■■□□ 2.4
SCAND1-202ENST00000373991 MED1Q15648 1581 aaPredicted RBP30.01■■■□□ 2.4
SCAND1-202ENST00000373991 JCADQ9P266 1359 aa30.01■■■□□ 2.4
SCAND1-202ENST00000373991 MARF1Q9Y4F3 1742 aaKnown RBP30.01■■■□□ 2.39
SCAND1-202ENST00000373991 HAP1P54257 671 aaPredicted RBP30■■■□□ 2.39
SCAND1-202ENST00000373991 USP54Q70EL1 1684 aa30■■■□□ 2.39
SCAND1-202ENST00000373991 SLIT3O75094 1523 aa29.97■■■□□ 2.39
SCAND1-202ENST00000373991 PPP2R1AP30153 589 aa29.96■■■□□ 2.39
SCAND1-202ENST00000373991 RRS1Q15050 365 aaKnown RBP29.96■■■□□ 2.39
SCAND1-202ENST00000373991 ZC3H6P61129 1189 aaKnown RBP29.95■■■□□ 2.38
SCAND1-202ENST00000373991 COL22A1Q8NFW1 1626 aaPredicted RBP29.95■■■□□ 2.38
SCAND1-202ENST00000373991 AATKQ6ZMQ8 1374 aa29.94■■■□□ 2.38
SCAND1-202ENST00000373991 NUTM2BA6NNL0 878 aaPredicted RBP29.93■■■□□ 2.38
SCAND1-202ENST00000373991 NUTM2EB1AL46 878 aaPredicted RBP29.93■■■□□ 2.38
SCAND1-202ENST00000373991 NUTM2AQ8IVF1 878 aaPredicted RBP29.93■■■□□ 2.38
SCAND1-202ENST00000373991 MYBBP1AQ9BQG0 1328 aaKnown RBP29.93■■■□□ 2.38
SCAND1-202ENST00000373991 POLKQ9UBT6 870 aa29.93■■■□□ 2.38
SCAND1-202ENST00000373991 ZBTB7CA1YPR0 619 aa29.92■■■□□ 2.38
SCAND1-202ENST00000373991 PPM1GO15355 546 aaPredicted RBP29.92■■■□□ 2.38
SCAND1-202ENST00000373991 MIER1Q8N108 512 aa29.92■■■□□ 2.38
SCAND1-202ENST00000373991 NFAT5O94916 1531 aa29.92■■■□□ 2.38
SCAND1-202ENST00000373991 SHPRHQ149N8 1683 aa29.91■■■□□ 2.38
SCAND1-202ENST00000373991 PHRF1Q9P1Y6 1649 aaKnown RBP29.91■■■□□ 2.38
SCAND1-202ENST00000373991 EMILIN1Q9Y6C2 1016 aa29.91■■■□□ 2.38
SCAND1-202ENST00000373991 CRYBG1Q9Y4K1 1723 aa29.91■■■□□ 2.38
SCAND1-202ENST00000373991 MAP3K19Q56UN5 1328 aa29.91■■■□□ 2.38
SCAND1-202ENST00000373991 MTHFSP49914 203 aa29.91■■■□□ 2.38
SCAND1-202ENST00000373991 ARHGEF25Q86VW2 580 aa29.89■■■□□ 2.38
SCAND1-202ENST00000373991 SPATA31A6Q5VVP1 1343 aa29.88■■■□□ 2.37
SCAND1-202ENST00000373991 KIAA0232Q92628 1395 aa29.87■■■□□ 2.37
SCAND1-202ENST00000373991 AMPHP49418 695 aa29.87■■■□□ 2.37
SCAND1-202ENST00000373991 ABCA3Q99758 1704 aa29.86■■■□□ 2.37
SCAND1-202ENST00000373991 ADAMTS2O95450 1211 aa29.86■■■□□ 2.37
SCAND1-202ENST00000373991 CPDO75976 1380 aa29.85■■■□□ 2.37
SCAND1-202ENST00000373991 PRDM11Q9NQV5 511 aa29.85■■■□□ 2.37
SCAND1-202ENST00000373991 CHRNA2Q15822 529 aa29.84■■■□□ 2.37
SCAND1-202ENST00000373991 MAP2P11137 1827 aaKnown RBP29.84■■■□□ 2.37
SCAND1-202ENST00000373991 FAM83GA6ND36 823 aa29.81■■■□□ 2.36
SCAND1-202ENST00000373991 HOXC9P31274 260 aa29.8■■■□□ 2.36
SCAND1-202ENST00000373991 SMG6Q86US8 1419 aaKnown RBP29.8■■■□□ 2.36
SCAND1-202ENST00000373991 IP6K1Q92551 441 aa29.79■■■□□ 2.36
SCAND1-202ENST00000373991 HSP90AB2PQ58FF8 381 aa29.79■■■□□ 2.36
SCAND1-202ENST00000373991 FLT4P35916 1363 aa29.79■■■□□ 2.36
SCAND1-202ENST00000373991 LTN1O94822 1766 aa29.78■■■□□ 2.36
SCAND1-202ENST00000373991 KIF24Q5T7B8 1368 aa29.78■■■□□ 2.36
SCAND1-202ENST00000373991 AXIN2Q9Y2T1 843 aa29.78■■■□□ 2.36
SCAND1-202ENST00000373991 CCDC184Q52MB2 194 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms