RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 PARD3Q8TEW0 1356 aa19.85■□□□□ 0.77
RCC1-201ENST00000373831 PMFBP1Q8TBY8 1022 aa19.84■□□□□ 0.77
RCC1-201ENST00000373831 C1orf167Q5SNV9 1468 aa19.84■□□□□ 0.77
RCC1-201ENST00000373831 COL16A1Q07092 1604 aaPredicted RBP19.82■□□□□ 0.76
RCC1-201ENST00000373831 USP6P35125 1406 aa19.82■□□□□ 0.76
RCC1-201ENST00000373831 KIF1AQ12756 1690 aa19.82■□□□□ 0.76
RCC1-201ENST00000373831 EDC4Q6P2E9 1401 aaKnown RBP19.82■□□□□ 0.76
RCC1-201ENST00000373831 SSH2Q76I76 1423 aa19.81■□□□□ 0.76
RCC1-201ENST00000373831 CGNL1Q0VF96 1302 aa19.8■□□□□ 0.76
RCC1-201ENST00000373831 BRINP3Q76B58 766 aa19.8■□□□□ 0.76
RCC1-201ENST00000373831 ORAI2Q96SN7 254 aa19.8■□□□□ 0.76
RCC1-201ENST00000373831 ZNF692Q9BU19 519 aaPredicted RBP19.8■□□□□ 0.76
RCC1-201ENST00000373831 PHF8Q9UPP1 1060 aa19.8■□□□□ 0.76
RCC1-201ENST00000373831 RALBP1Q15311 655 aa19.79■□□□□ 0.76
RCC1-201ENST00000373831 ESCO1Q5FWF5 840 aa19.79■□□□□ 0.76
RCC1-201ENST00000373831 SPATA31A6Q5VVP1 1343 aa19.79■□□□□ 0.76
RCC1-201ENST00000373831 NGDNQ8NEJ9 315 aaKnown RBP19.78■□□□□ 0.76
RCC1-201ENST00000373831 LRP6O75581 1613 aa19.77■□□□□ 0.76
RCC1-201ENST00000373831 AHDC1Q5TGY3 1603 aaPredicted RBP19.77■□□□□ 0.76
RCC1-201ENST00000373831 FYB1O15117 783 aa19.77■□□□□ 0.76
RCC1-201ENST00000373831 MEX3CQ5U5Q3 659 aaKnown RBP19.77■□□□□ 0.76
RCC1-201ENST00000373831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.77■□□□□ 0.76
RCC1-201ENST00000373831 NSD2O96028 1365 aa19.76■□□□□ 0.75
RCC1-201ENST00000373831 PIK3C2AO00443 1686 aa19.76■□□□□ 0.75
RCC1-201ENST00000373831 CCER2I3L3R5 266 aa19.76■□□□□ 0.75
RCC1-201ENST00000373831 CCDC184Q52MB2 194 aa19.76■□□□□ 0.75
RCC1-201ENST00000373831 TRPM3Q9HCF6 1732 aaPredicted RBP19.75■□□□□ 0.75
RCC1-201ENST00000373831 MARF1Q9Y4F3 1742 aaKnown RBP19.75■□□□□ 0.75
RCC1-201ENST00000373831 TTC21BQ7Z4L5 1316 aa19.75■□□□□ 0.75
RCC1-201ENST00000373831 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
RCC1-201ENST00000373831 GGNBP2Q9H3C7 697 aa19.74■□□□□ 0.75
RCC1-201ENST00000373831 NME9Q86XW9 330 aa19.74■□□□□ 0.75
RCC1-201ENST00000373831 ZRANB1Q9UGI0 708 aa19.72■□□□□ 0.75
RCC1-201ENST00000373831 USP54Q70EL1 1684 aa19.72■□□□□ 0.75
RCC1-201ENST00000373831 NUTM2BA6NNL0 878 aaPredicted RBP19.71■□□□□ 0.75
RCC1-201ENST00000373831 NUTM2EB1AL46 878 aaPredicted RBP19.71■□□□□ 0.75
RCC1-201ENST00000373831 NUTM2AQ8IVF1 878 aaPredicted RBP19.71■□□□□ 0.75
RCC1-201ENST00000373831 MAP2P11137 1827 aaKnown RBP19.7■□□□□ 0.74
RCC1-201ENST00000373831 FOXO3O43524 673 aa19.7■□□□□ 0.74
RCC1-201ENST00000373831 PPP2R1AP30153 589 aa19.7■□□□□ 0.74
RCC1-201ENST00000373831 ZNF772Q68DY9 489 aaPredicted RBP19.7■□□□□ 0.74
RCC1-201ENST00000373831 MORC1Q86VD1 984 aa19.7■□□□□ 0.74
RCC1-201ENST00000373831 SHPRHQ149N8 1683 aa19.69■□□□□ 0.74
RCC1-201ENST00000373831 DDX17Q92841 729 aaKnown RBP19.69■□□□□ 0.74
RCC1-201ENST00000373831 OVOS2A0A0J9YW53 1432 aa19.69■□□□□ 0.74
RCC1-201ENST00000373831 OVOS2Q6IE36 1432 aa19.69■□□□□ 0.74
RCC1-201ENST00000373831 TTC21AQ8NDW8 1320 aa19.68■□□□□ 0.74
RCC1-201ENST00000373831 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
RCC1-201ENST00000373831 BRD4O60885 1362 aaPredicted RBP19.67■□□□□ 0.74
RCC1-201ENST00000373831 PSME1Q06323 249 aa19.67■□□□□ 0.74
RCC1-201ENST00000373831 NLRP13Q86W25 1043 aa19.67■□□□□ 0.74
RCC1-201ENST00000373831 NHSL1Q5SYE7 1610 aa19.67■□□□□ 0.74
RCC1-201ENST00000373831 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
RCC1-201ENST00000373831 XPCQ01831 940 aaPredicted RBP19.66■□□□□ 0.74
RCC1-201ENST00000373831 PXDNQ92626 1479 aa19.66■□□□□ 0.74
RCC1-201ENST00000373831 LRRC59Q96AG4 307 aaKnown RBP19.66■□□□□ 0.74
RCC1-201ENST00000373831 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
RCC1-201ENST00000373831 USP31Q70CQ4 1352 aa19.64■□□□□ 0.74
RCC1-201ENST00000373831 KRT28Q7Z3Y7 464 aa19.64■□□□□ 0.73
RCC1-201ENST00000373831 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
RCC1-201ENST00000373831 COG3Q96JB2 828 aa19.62■□□□□ 0.73
RCC1-201ENST00000373831 FBLN1P23142 703 aa19.61■□□□□ 0.73
RCC1-201ENST00000373831 RXRBP28702 533 aa19.61■□□□□ 0.73
RCC1-201ENST00000373831 AFF2P51816 1311 aa19.61■□□□□ 0.73
RCC1-201ENST00000373831 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
RCC1-201ENST00000373831 PNPLA6Q8IY17 1366 aa19.6■□□□□ 0.73
RCC1-201ENST00000373831 NUTM2GQ5VZR2 741 aa19.6■□□□□ 0.73
RCC1-201ENST00000373831 ABTB2Q8N961 1025 aa19.6■□□□□ 0.73
RCC1-201ENST00000373831 SBNO1A3KN83 1393 aa19.58■□□□□ 0.73
RCC1-201ENST00000373831 AATKQ6ZMQ8 1374 aa19.58■□□□□ 0.73
RCC1-201ENST00000373831 CRYBG1Q9Y4K1 1723 aa19.58■□□□□ 0.73
RCC1-201ENST00000373831 NLRP6P59044 892 aa19.58■□□□□ 0.73
RCC1-201ENST00000373831 C8orf37Q96NL8 207 aa19.58■□□□□ 0.73
RCC1-201ENST00000373831 MTHFSP49914 203 aa19.57■□□□□ 0.72
RCC1-201ENST00000373831 PNISRQ8TF01 805 aaKnown RBP19.57■□□□□ 0.72
RCC1-201ENST00000373831 PEAK1Q9H792 1746 aa19.57■□□□□ 0.72
RCC1-201ENST00000373831 SOS2Q07890 1332 aaPredicted RBP19.57■□□□□ 0.72
RCC1-201ENST00000373831 UPF1Q92900 1129 aaKnown RBP eCLIP19.57■□□□□ 0.72
RCC1-201ENST00000373831 SMG6Q86US8 1419 aaKnown RBP19.56■□□□□ 0.72
RCC1-201ENST00000373831 LTN1O94822 1766 aa19.56■□□□□ 0.72
RCC1-201ENST00000373831 COL3A1P02461 1466 aaPredicted RBP19.56■□□□□ 0.72
RCC1-201ENST00000373831 POLKQ9UBT6 870 aa19.56■□□□□ 0.72
RCC1-201ENST00000373831 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
RCC1-201ENST00000373831 SLIT3O75094 1523 aa19.55■□□□□ 0.72
RCC1-201ENST00000373831 NFAT5O94916 1531 aa19.55■□□□□ 0.72
RCC1-201ENST00000373831 PHRF1Q9P1Y6 1649 aaKnown RBP19.54■□□□□ 0.72
RCC1-201ENST00000373831 ADAMTS2O95450 1211 aa19.54■□□□□ 0.72
RCC1-201ENST00000373831 SPATA31A3Q5VYP0 1347 aa19.54■□□□□ 0.72
RCC1-201ENST00000373831 RRS1Q15050 365 aaKnown RBP19.53■□□□□ 0.72
RCC1-201ENST00000373831 EMILIN1Q9Y6C2 1016 aa19.53■□□□□ 0.72
RCC1-201ENST00000373831 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
RCC1-201ENST00000373831 QTRT2Q9H974 415 aaKnown RBP19.53■□□□□ 0.72
RCC1-201ENST00000373831 USP19O94966 1318 aa19.52■□□□□ 0.72
RCC1-201ENST00000373831 NGLY1Q96IV0 654 aa19.52■□□□□ 0.71
RCC1-201ENST00000373831 CDK12Q9NYV4 1490 aaPredicted RBP19.52■□□□□ 0.71
RCC1-201ENST00000373831 ABCA3Q99758 1704 aa19.51■□□□□ 0.71
RCC1-201ENST00000373831 SOX12O15370 315 aa19.51■□□□□ 0.71
RCC1-201ENST00000373831 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
RCC1-201ENST00000373831 INSRP06213 1382 aa19.5■□□□□ 0.71
RCC1-201ENST00000373831 RBM6P78332 1123 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms