RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 GIMAP7Q8NHV1 300 aa18.39■□□□□ 0.54
SRPK1-204ENST00000373825 UPF3BQ9BZI7 483 aaKnown RBP18.39■□□□□ 0.54
SRPK1-204ENST00000373825 TULP1O00294 542 aaPredicted RBP18.39■□□□□ 0.53
SRPK1-204ENST00000373825 MNAT1P51948 309 aa18.39■□□□□ 0.53
SRPK1-204ENST00000373825 RSPH14Q9UHP6 348 aa18.39■□□□□ 0.53
SRPK1-204ENST00000373825 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
SRPK1-204ENST00000373825 SDF4Q9BRK5 362 aa18.39■□□□□ 0.53
SRPK1-204ENST00000373825 ACBD3Q9H3P7 528 aa18.39■□□□□ 0.53
SRPK1-204ENST00000373825 CCDC191Q8NCU4 936 aa18.39■□□□□ 0.53
SRPK1-204ENST00000373825 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
SRPK1-204ENST00000373825 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
SRPK1-204ENST00000373825 LRPPRCP42704 1394 aaKnown RBP18.37■□□□□ 0.53
SRPK1-204ENST00000373825 PPP1R9BQ96SB3 815 aa18.37■□□□□ 0.53
SRPK1-204ENST00000373825 PLCD4Q9BRC7 762 aa18.37■□□□□ 0.53
SRPK1-204ENST00000373825 ZNF500O60304 480 aaPredicted RBP18.36■□□□□ 0.53
SRPK1-204ENST00000373825 URI1O94763 535 aaPredicted RBP18.36■□□□□ 0.53
SRPK1-204ENST00000373825 GIMAP6Q6P9H5 292 aa18.36■□□□□ 0.53
SRPK1-204ENST00000373825 CCDC73Q6ZRK6 1079 aa18.36■□□□□ 0.53
SRPK1-204ENST00000373825 CCDC186Q7Z3E2 898 aa18.36■□□□□ 0.53
SRPK1-204ENST00000373825 CKAP2LQ8IYA6 745 aa18.36■□□□□ 0.53
SRPK1-204ENST00000373825 KDM2BQ8NHM5 1336 aa18.36■□□□□ 0.53
SRPK1-204ENST00000373825 MAP3K1Q13233 1512 aa18.36■□□□□ 0.53
SRPK1-204ENST00000373825 PES1O00541 588 aaKnown RBP18.36■□□□□ 0.53
SRPK1-204ENST00000373825 CCDC183Q5T5S1 534 aa18.36■□□□□ 0.53
SRPK1-204ENST00000373825 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
SRPK1-204ENST00000373825 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
SRPK1-204ENST00000373825 ANKRD30AQ9BXX3 1397 aa18.35■□□□□ 0.53
SRPK1-204ENST00000373825 DRC1Q96MC2 740 aa18.35■□□□□ 0.53
SRPK1-204ENST00000373825 PRXQ9BXM0 1461 aa18.35■□□□□ 0.53
SRPK1-204ENST00000373825 USP8P40818 1118 aa18.35■□□□□ 0.53
SRPK1-204ENST00000373825 RARSP54136 660 aaKnown RBP18.34■□□□□ 0.53
SRPK1-204ENST00000373825 FERMT3Q86UX7 667 aa18.34■□□□□ 0.53
SRPK1-204ENST00000373825 NUP62CLQ9H1M0 184 aa18.34■□□□□ 0.53
SRPK1-204ENST00000373825 GABPB1Q06547 395 aaPredicted RBP18.34■□□□□ 0.53
SRPK1-204ENST00000373825 ATF7IPQ6VMQ6 1270 aa18.34■□□□□ 0.53
SRPK1-204ENST00000373825 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
SRPK1-204ENST00000373825 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
SRPK1-204ENST00000373825 MCM2P49736 904 aa18.33■□□□□ 0.53
SRPK1-204ENST00000373825 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.33■□□□□ 0.53
SRPK1-204ENST00000373825 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
SRPK1-204ENST00000373825 TNNQ9UQP3 1299 aa18.33■□□□□ 0.53
SRPK1-204ENST00000373825 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.52
SRPK1-204ENST00000373825 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
SRPK1-204ENST00000373825 TMEM57Q8N5G2 664 aa18.33■□□□□ 0.52
SRPK1-204ENST00000373825 FAM193AP78312 1265 aa18.32■□□□□ 0.52
SRPK1-204ENST00000373825 DNAAF4Q8WXU2 420 aa18.32■□□□□ 0.52
SRPK1-204ENST00000373825 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
SRPK1-204ENST00000373825 TXLNBQ8N3L3 684 aa18.32■□□□□ 0.52
SRPK1-204ENST00000373825 PIBF1Q8WXW3 757 aa18.32■□□□□ 0.52
SRPK1-204ENST00000373825 HDAC5Q9UQL6 1122 aa18.32■□□□□ 0.52
SRPK1-204ENST00000373825 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
SRPK1-204ENST00000373825 GCC1Q96CN9 775 aa18.31■□□□□ 0.52
SRPK1-204ENST00000373825 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
SRPK1-204ENST00000373825 KRBA2Q6ZNG9 492 aa18.31■□□□□ 0.52
SRPK1-204ENST00000373825 RUFY1Q96T51 708 aa18.31■□□□□ 0.52
SRPK1-204ENST00000373825 LARP6Q9BRS8 491 aaKnown RBP18.31■□□□□ 0.52
SRPK1-204ENST00000373825 PRDM4Q9UKN5 801 aa18.31■□□□□ 0.52
SRPK1-204ENST00000373825 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
SRPK1-204ENST00000373825 ERC2O15083 957 aa18.31■□□□□ 0.52
SRPK1-204ENST00000373825 PTGS1P23219 599 aa18.3■□□□□ 0.52
SRPK1-204ENST00000373825 PAXBP1Q9Y5B6 917 aa18.3■□□□□ 0.52
SRPK1-204ENST00000373825 ZKSCAN1P17029 563 aaPredicted RBP18.3■□□□□ 0.52
SRPK1-204ENST00000373825 ZGPATQ8N5A5 531 aaKnown RBP18.3■□□□□ 0.52
SRPK1-204ENST00000373825 TDO2P48775 406 aa18.3■□□□□ 0.52
SRPK1-204ENST00000373825 STK26Q9P289 416 aa18.3■□□□□ 0.52
SRPK1-204ENST00000373825 KIAA0754O94854 1291 aa18.3■□□□□ 0.52
SRPK1-204ENST00000373825 IGF1RP08069 1367 aa18.29■□□□□ 0.52
SRPK1-204ENST00000373825 CT47A1Q5JQC4 288 aaPredicted RBP18.29■□□□□ 0.52
SRPK1-204ENST00000373825 ZNF397Q8NF99 534 aaPredicted RBP18.29■□□□□ 0.52
SRPK1-204ENST00000373825 RNF20Q5VTR2 975 aa18.29■□□□□ 0.52
SRPK1-204ENST00000373825 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
SRPK1-204ENST00000373825 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
SRPK1-204ENST00000373825 EIF3JO75822 258 aaKnown RBP18.29■□□□□ 0.52
SRPK1-204ENST00000373825 CT47B1P0C2W7 299 aaPredicted RBP18.29■□□□□ 0.52
SRPK1-204ENST00000373825 ATP2B3Q16720 1220 aa18.29■□□□□ 0.52
SRPK1-204ENST00000373825 RSPH4AQ5TD94 716 aa18.28■□□□□ 0.52
SRPK1-204ENST00000373825 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.28■□□□□ 0.52
SRPK1-204ENST00000373825 SRRTQ9BXP5 876 aaKnown RBP18.28■□□□□ 0.52
SRPK1-204ENST00000373825 CDR1P51861 262 aa18.28■□□□□ 0.52
SRPK1-204ENST00000373825 KINO60870 393 aaKnown RBP18.28■□□□□ 0.52
SRPK1-204ENST00000373825 MTHFSP49914 203 aa18.28■□□□□ 0.52
SRPK1-204ENST00000373825 ZSWIM4Q9H7M6 989 aa18.28■□□□□ 0.52
SRPK1-204ENST00000373825 TTC31Q49AM3 519 aaPredicted RBP18.28■□□□□ 0.52
SRPK1-204ENST00000373825 BANK1Q8NDB2 785 aa18.28■□□□□ 0.52
SRPK1-204ENST00000373825 TRAK1Q9UPV9 953 aa18.28■□□□□ 0.52
SRPK1-204ENST00000373825 SNX21Q969T3 373 aa18.27■□□□□ 0.52
SRPK1-204ENST00000373825 NAT10Q9H0A0 1025 aaKnown RBP18.27■□□□□ 0.52
SRPK1-204ENST00000373825 KRT85P78386 507 aa18.27■□□□□ 0.51
SRPK1-204ENST00000373825 UVSSAQ2YD98 709 aa18.27■□□□□ 0.51
SRPK1-204ENST00000373825 CCDC34Q96HJ3 373 aa18.27■□□□□ 0.51
SRPK1-204ENST00000373825 ZNF445P59923 1031 aa18.26■□□□□ 0.51
SRPK1-204ENST00000373825 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
SRPK1-204ENST00000373825 API5Q9BZZ5 524 aaKnown RBP18.26■□□□□ 0.51
SRPK1-204ENST00000373825 CCDC70Q6NSX1 233 aa18.26■□□□□ 0.51
SRPK1-204ENST00000373825 HFM1A2PYH4 1435 aa18.26■□□□□ 0.51
SRPK1-204ENST00000373825 NINLQ9Y2I6 1382 aa18.25■□□□□ 0.51
SRPK1-204ENST00000373825 ERCC4Q92889 916 aaPredicted RBP18.25■□□□□ 0.51
SRPK1-204ENST00000373825 CHAMP1Q96JM3 812 aa18.25■□□□□ 0.51
SRPK1-204ENST00000373825 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
SRPK1-204ENST00000373825 MICALL1Q8N3F8 863 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms