RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 PARD3Q8TEW0 1356 aa17.56■□□□□ 0.4
COL16A1-202ENST00000373668 PPRC1Q5VV67 1664 aaKnown RBP17.56■□□□□ 0.4
COL16A1-202ENST00000373668 CENPQQ7L2Z9 268 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-202ENST00000373668 EXOSC9Q06265 439 aaKnown RBP17.55■□□□□ 0.4
COL16A1-202ENST00000373668 FRAT2O75474 233 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-202ENST00000373668 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
COL16A1-202ENST00000373668 RNF17Q9BXT8 1623 aaKnown RBP17.55■□□□□ 0.4
COL16A1-202ENST00000373668 ERVK-7P63135 1459 aa17.55■□□□□ 0.4
COL16A1-202ENST00000373668 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
COL16A1-202ENST00000373668 PHF8Q9UPP1 1060 aa17.54■□□□□ 0.4
COL16A1-202ENST00000373668 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
COL16A1-202ENST00000373668 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-202ENST00000373668 TET3O43151 1660 aa17.53■□□□□ 0.4
COL16A1-202ENST00000373668 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
COL16A1-202ENST00000373668 MCM10Q7L590 875 aa17.53■□□□□ 0.4
COL16A1-202ENST00000373668 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
COL16A1-202ENST00000373668 NLRP2Q9NX02 1062 aa17.53■□□□□ 0.4
COL16A1-202ENST00000373668 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
COL16A1-202ENST00000373668 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.4
COL16A1-202ENST00000373668 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.4
COL16A1-202ENST00000373668 SPRYD3Q8NCJ5 442 aa17.52■□□□□ 0.4
COL16A1-202ENST00000373668 ZNF692Q9BU19 519 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-202ENST00000373668 PIK3C2GO75747 1445 aa17.52■□□□□ 0.39
COL16A1-202ENST00000373668 E9PSI1 815 aa17.52■□□□□ 0.39
COL16A1-202ENST00000373668 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
COL16A1-202ENST00000373668 CHRNA2Q15822 529 aa17.51■□□□□ 0.39
COL16A1-202ENST00000373668 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
COL16A1-202ENST00000373668 ROBO2Q9HCK4 1378 aa17.51■□□□□ 0.39
COL16A1-202ENST00000373668 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
COL16A1-202ENST00000373668 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
COL16A1-202ENST00000373668 NGEFQ8N5V2 710 aa17.5■□□□□ 0.39
COL16A1-202ENST00000373668 BECN1Q14457 450 aa17.5■□□□□ 0.39
COL16A1-202ENST00000373668 CCDC9Q9Y3X0 531 aaKnown RBP17.5■□□□□ 0.39
COL16A1-202ENST00000373668 TMPOP42166 694 aaKnown RBP17.49■□□□□ 0.39
COL16A1-202ENST00000373668 PRR36Q9H6K5 1346 aa17.49■□□□□ 0.39
COL16A1-202ENST00000373668 PNNQ9H307 717 aaKnown RBP17.49■□□□□ 0.39
COL16A1-202ENST00000373668 SPHKAPQ2M3C7 1700 aa17.49■□□□□ 0.39
COL16A1-202ENST00000373668 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
COL16A1-202ENST00000373668 STRN4Q9NRL3 753 aa17.49■□□□□ 0.39
COL16A1-202ENST00000373668 TNNQ9UQP3 1299 aa17.49■□□□□ 0.39
COL16A1-202ENST00000373668 TTC21BQ7Z4L5 1316 aa17.48■□□□□ 0.39
COL16A1-202ENST00000373668 ANKRD36BQ8N2N9 1353 aa17.48■□□□□ 0.39
COL16A1-202ENST00000373668 TBX22Q9Y458 520 aa17.48■□□□□ 0.39
COL16A1-202ENST00000373668 KIF1BO60333 1816 aa17.48■□□□□ 0.39
COL16A1-202ENST00000373668 A2ML1A8K2U0 1454 aa17.46■□□□□ 0.39
COL16A1-202ENST00000373668 EIF2AK4Q9P2K8 1649 aaKnown RBP17.46■□□□□ 0.38
COL16A1-202ENST00000373668 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
COL16A1-202ENST00000373668 SLFN5Q08AF3 891 aa17.45■□□□□ 0.38
COL16A1-202ENST00000373668 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
COL16A1-202ENST00000373668 LRRC59Q96AG4 307 aaKnown RBP17.45■□□□□ 0.38
COL16A1-202ENST00000373668 KAT6BQ8WYB5 2073 aa17.45■□□□□ 0.38
COL16A1-202ENST00000373668 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
COL16A1-202ENST00000373668 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
COL16A1-202ENST00000373668 NUTM2BA6NNL0 878 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-202ENST00000373668 NUTM2EB1AL46 878 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-202ENST00000373668 NUTM2AQ8IVF1 878 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-202ENST00000373668 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-202ENST00000373668 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
COL16A1-202ENST00000373668 KRT28Q7Z3Y7 464 aa17.42■□□□□ 0.38
COL16A1-202ENST00000373668 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
COL16A1-202ENST00000373668 EVA1CP58658 441 aa17.41■□□□□ 0.38
COL16A1-202ENST00000373668 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
COL16A1-202ENST00000373668 MADDQ8WXG6 1647 aa17.4■□□□□ 0.38
COL16A1-202ENST00000373668 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
COL16A1-202ENST00000373668 EIF4A2Q14240 407 aaKnown RBP17.39■□□□□ 0.37
COL16A1-202ENST00000373668 MROH1Q8NDA8 1641 aa17.39■□□□□ 0.37
COL16A1-202ENST00000373668 ARHGAP31Q2M1Z3 1444 aa17.39■□□□□ 0.37
COL16A1-202ENST00000373668 ABCC11Q96J66 1382 aa17.39■□□□□ 0.37
COL16A1-202ENST00000373668 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-202ENST00000373668 MAP3K4Q9Y6R4 1608 aa17.39■□□□□ 0.37
COL16A1-202ENST00000373668 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
COL16A1-202ENST00000373668 TEFQ10587 303 aa17.38■□□□□ 0.37
COL16A1-202ENST00000373668 CAMSAP1Q5T5Y3 1602 aa17.36■□□□□ 0.37
COL16A1-202ENST00000373668 FCHSD2O94868 740 aa17.36■□□□□ 0.37
COL16A1-202ENST00000373668 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
COL16A1-202ENST00000373668 NOB1Q9ULX3 412 aaKnown RBP17.36■□□□□ 0.37
COL16A1-202ENST00000373668 C8orf34Q49A92 452 aa17.36■□□□□ 0.37
COL16A1-202ENST00000373668 MPRIPQ6WCQ1 1025 aa17.36■□□□□ 0.37
COL16A1-202ENST00000373668 MYOM2P54296 1465 aa17.36■□□□□ 0.37
COL16A1-202ENST00000373668 SYNMO15061 1565 aa17.35■□□□□ 0.37
COL16A1-202ENST00000373668 ADAMTS2O95450 1211 aa17.35■□□□□ 0.37
COL16A1-202ENST00000373668 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
COL16A1-202ENST00000373668 PRDM11Q9NQV5 511 aa17.35■□□□□ 0.37
COL16A1-202ENST00000373668 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
COL16A1-202ENST00000373668 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-202ENST00000373668 SSH1Q8WYL5 1049 aa17.34■□□□□ 0.37
COL16A1-202ENST00000373668 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
COL16A1-202ENST00000373668 TSPYL6Q8N831 410 aa17.33■□□□□ 0.37
COL16A1-202ENST00000373668 ADGRB3O60242 1522 aa17.33■□□□□ 0.37
COL16A1-202ENST00000373668 NFE2L2Q16236 605 aa17.33■□□□□ 0.36
COL16A1-202ENST00000373668 TWISTNBQ3B726 338 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-202ENST00000373668 C1orf141Q5JVX7 400 aa17.33■□□□□ 0.36
COL16A1-202ENST00000373668 ANXA1P04083 346 aa17.33■□□□□ 0.36
COL16A1-202ENST00000373668 NAP1L5Q96NT1 182 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-202ENST00000373668 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
COL16A1-202ENST00000373668 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
COL16A1-202ENST00000373668 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
COL16A1-202ENST00000373668 EYA1Q99502 592 aa17.32■□□□□ 0.36
COL16A1-202ENST00000373668 RICTORQ6R327 1708 aa17.32■□□□□ 0.36
COL16A1-202ENST00000373668 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms