RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SPATA31A3Q5VYP0 1347 aa25.82■■□□□ 1.72
CDX4-201ENST00000373514 PHRF1Q9P1Y6 1649 aaKnown RBP25.81■■□□□ 1.72
CDX4-201ENST00000373514 CDCA8Q53HL2 280 aa25.81■■□□□ 1.72
CDX4-201ENST00000373514 NINLQ9Y2I6 1382 aa25.81■■□□□ 1.72
CDX4-201ENST00000373514 LRP6O75581 1613 aa25.81■■□□□ 1.72
CDX4-201ENST00000373514 MED1Q15648 1581 aaPredicted RBP25.79■■□□□ 1.72
CDX4-201ENST00000373514 SSH2Q76I76 1423 aa25.79■■□□□ 1.72
CDX4-201ENST00000373514 KTN1Q86UP2 1357 aaKnown RBP25.79■■□□□ 1.72
CDX4-201ENST00000373514 KIF7Q2M1P5 1343 aa25.79■■□□□ 1.72
CDX4-201ENST00000373514 KIF20BQ96Q89 1820 aa25.78■■□□□ 1.72
CDX4-201ENST00000373514 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
CDX4-201ENST00000373514 LMOD2Q6P5Q4 547 aa25.77■■□□□ 1.72
CDX4-201ENST00000373514 ANKRD36BQ8N2N9 1353 aa25.76■■□□□ 1.71
CDX4-201ENST00000373514 USP54Q70EL1 1684 aa25.74■■□□□ 1.71
CDX4-201ENST00000373514 PLEKHG5O94827 1062 aa25.74■■□□□ 1.71
CDX4-201ENST00000373514 ARHGEF10O15013 1369 aa25.74■■□□□ 1.71
CDX4-201ENST00000373514 HDGFL2Q7Z4V5 671 aaPredicted RBP25.73■■□□□ 1.71
CDX4-201ENST00000373514 CCDC7Q96M83 1385 aa25.73■■□□□ 1.71
CDX4-201ENST00000373514 NUTM2GQ5VZR2 741 aa25.73■■□□□ 1.71
CDX4-201ENST00000373514 WASHC2AQ641Q2 1341 aa25.72■■□□□ 1.71
CDX4-201ENST00000373514 EDC4Q6P2E9 1401 aaKnown RBP25.72■■□□□ 1.71
CDX4-201ENST00000373514 TERF2IPQ9NYB0 399 aa25.72■■□□□ 1.71
CDX4-201ENST00000373514 SPATA31A6Q5VVP1 1343 aa25.7■■□□□ 1.71
CDX4-201ENST00000373514 TTC21BQ7Z4L5 1316 aa25.7■■□□□ 1.71
CDX4-201ENST00000373514 NUTM2BA6NNL0 878 aaPredicted RBP25.7■■□□□ 1.7
CDX4-201ENST00000373514 NUTM2EB1AL46 878 aaPredicted RBP25.7■■□□□ 1.7
CDX4-201ENST00000373514 NUTM2AQ8IVF1 878 aaPredicted RBP25.7■■□□□ 1.7
CDX4-201ENST00000373514 ZNF692Q9BU19 519 aaPredicted RBP25.7■■□□□ 1.7
CDX4-201ENST00000373514 BRD4O60885 1362 aaPredicted RBP25.7■■□□□ 1.7
CDX4-201ENST00000373514 CABLES1Q8TDN4 633 aa25.69■■□□□ 1.7
CDX4-201ENST00000373514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.68■■□□□ 1.7
CDX4-201ENST00000373514 ABTB2Q8N961 1025 aa25.67■■□□□ 1.7
CDX4-201ENST00000373514 NSD3Q9BZ95 1437 aa25.67■■□□□ 1.7
CDX4-201ENST00000373514 PLCH1Q4KWH8 1693 aa25.65■■□□□ 1.7
CDX4-201ENST00000373514 SLIT3O75094 1523 aa25.65■■□□□ 1.7
CDX4-201ENST00000373514 ANKRD26Q9UPS8 1709 aa25.65■■□□□ 1.7
CDX4-201ENST00000373514 ZNF316A6NFI3 1004 aaPredicted RBP25.65■■□□□ 1.7
CDX4-201ENST00000373514 TTC21AQ8NDW8 1320 aa25.65■■□□□ 1.7
CDX4-201ENST00000373514 NME9Q86XW9 330 aa25.64■■□□□ 1.7
CDX4-201ENST00000373514 CARD14Q9BXL6 1004 aa25.63■■□□□ 1.69
CDX4-201ENST00000373514 ZRANB1Q9UGI0 708 aa25.63■■□□□ 1.69
CDX4-201ENST00000373514 USP19O94966 1318 aa25.62■■□□□ 1.69
CDX4-201ENST00000373514 ADAMTS2O95450 1211 aa25.61■■□□□ 1.69
CDX4-201ENST00000373514 LTN1O94822 1766 aa25.61■■□□□ 1.69
CDX4-201ENST00000373514 PANK3Q9H999 370 aa25.6■■□□□ 1.69
CDX4-201ENST00000373514 OVOS2A0A0J9YW53 1432 aa25.6■■□□□ 1.69
CDX4-201ENST00000373514 OVOS2Q6IE36 1432 aa25.6■■□□□ 1.69
CDX4-201ENST00000373514 NLRP6P59044 892 aa25.59■■□□□ 1.69
CDX4-201ENST00000373514 HAP1P54257 671 aaPredicted RBP25.58■■□□□ 1.69
CDX4-201ENST00000373514 NFAT5O94916 1531 aa25.58■■□□□ 1.68
CDX4-201ENST00000373514 MEX3CQ5U5Q3 659 aaKnown RBP25.57■■□□□ 1.68
CDX4-201ENST00000373514 COL14A1Q05707 1796 aaKnown RBP25.57■■□□□ 1.68
CDX4-201ENST00000373514 USP31Q70CQ4 1352 aa25.56■■□□□ 1.68
CDX4-201ENST00000373514 NLRP13Q86W25 1043 aa25.56■■□□□ 1.68
CDX4-201ENST00000373514 NRAPQ86VF7 1730 aa25.55■■□□□ 1.68
CDX4-201ENST00000373514 RGPD5Q99666 1765 aa25.55■■□□□ 1.68
CDX4-201ENST00000373514 C8orf37Q96NL8 207 aa25.53■■□□□ 1.68
CDX4-201ENST00000373514 NWD2Q9ULI1 1742 aa25.53■■□□□ 1.68
CDX4-201ENST00000373514 LMO7Q8WWI1 1683 aa25.53■■□□□ 1.68
CDX4-201ENST00000373514 GGNBP2Q9H3C7 697 aa25.53■■□□□ 1.68
CDX4-201ENST00000373514 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.52■■□□□ 1.68
CDX4-201ENST00000373514 SOX12O15370 315 aa25.52■■□□□ 1.68
CDX4-201ENST00000373514 COL18A1P39060 1754 aa25.51■■□□□ 1.67
CDX4-201ENST00000373514 FYB1O15117 783 aa25.51■■□□□ 1.67
CDX4-201ENST00000373514 KIAA0232Q92628 1395 aa25.51■■□□□ 1.67
CDX4-201ENST00000373514 ZC3H6P61129 1189 aaKnown RBP25.49■■□□□ 1.67
CDX4-201ENST00000373514 GCP02774 474 aa25.48■■□□□ 1.67
CDX4-201ENST00000373514 CGNL1Q0VF96 1302 aa25.48■■□□□ 1.67
CDX4-201ENST00000373514 AFF2P51816 1311 aa25.47■■□□□ 1.67
CDX4-201ENST00000373514 COG3Q96JB2 828 aa25.47■■□□□ 1.67
CDX4-201ENST00000373514 SLIT2O94813 1529 aa25.46■■□□□ 1.67
CDX4-201ENST00000373514 MAP2P11137 1827 aaKnown RBP25.46■■□□□ 1.67
CDX4-201ENST00000373514 ZBTB7CA1YPR0 619 aa25.45■■□□□ 1.66
CDX4-201ENST00000373514 CHRNA2Q15822 529 aa25.45■■□□□ 1.66
CDX4-201ENST00000373514 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
CDX4-201ENST00000373514 PEAK1Q9H792 1746 aa25.45■■□□□ 1.66
CDX4-201ENST00000373514 CPDO75976 1380 aa25.44■■□□□ 1.66
CDX4-201ENST00000373514 NGLY1Q96IV0 654 aa25.44■■□□□ 1.66
CDX4-201ENST00000373514 PRDM11Q9NQV5 511 aa25.44■■□□□ 1.66
CDX4-201ENST00000373514 FAM83GA6ND36 823 aa25.43■■□□□ 1.66
CDX4-201ENST00000373514 RGS17Q9UGC6 210 aaPredicted RBP25.43■■□□□ 1.66
CDX4-201ENST00000373514 PER1O15534 1290 aaPredicted RBP25.42■■□□□ 1.66
CDX4-201ENST00000373514 FBLN1P23142 703 aa25.42■■□□□ 1.66
CDX4-201ENST00000373514 KNSTRNQ9Y448 316 aa25.42■■□□□ 1.66
CDX4-201ENST00000373514 BCL9LQ86UU0 1499 aa25.42■■□□□ 1.66
CDX4-201ENST00000373514 CAMTA1Q9Y6Y1 1673 aa25.42■■□□□ 1.66
CDX4-201ENST00000373514 KCNH5Q8NCM2 988 aa25.41■■□□□ 1.66
CDX4-201ENST00000373514 AMER1Q5JTC6 1135 aaPredicted RBP25.4■■□□□ 1.66
CDX4-201ENST00000373514 NSD2O96028 1365 aa25.4■■□□□ 1.66
CDX4-201ENST00000373514 ABCC6O95255 1503 aa25.38■■□□□ 1.65
CDX4-201ENST00000373514 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
CDX4-201ENST00000373514 FNBP4Q8N3X1 1017 aaPredicted RBP25.37■■□□□ 1.65
CDX4-201ENST00000373514 USP21Q9UK80 565 aa25.37■■□□□ 1.65
CDX4-201ENST00000373514 DDX10Q13206 875 aaKnown RBP25.37■■□□□ 1.65
CDX4-201ENST00000373514 ARHGEF25Q86VW2 580 aa25.37■■□□□ 1.65
CDX4-201ENST00000373514 BTG4Q9NY30 223 aa25.37■■□□□ 1.65
CDX4-201ENST00000373514 COL5A2P05997 1499 aaPredicted RBP25.35■■□□□ 1.65
CDX4-201ENST00000373514 CC2D1BQ5T0F9 858 aaKnown RBP25.35■■□□□ 1.65
CDX4-201ENST00000373514 RGPD2P0DJD1 1756 aa25.35■■□□□ 1.65
CDX4-201ENST00000373514 AATKQ6ZMQ8 1374 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms