RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 SLIT2O94813 1529 aa32.31■■■□□ 2.76
COL9A2-201ENST00000372736 EVC2Q86UK5 1308 aa32.3■■■□□ 2.76
COL9A2-201ENST00000372736 PLCH1Q4KWH8 1693 aa32.3■■■□□ 2.76
COL9A2-201ENST00000372736 PLEKHG5O94827 1062 aa32.29■■■□□ 2.76
COL9A2-201ENST00000372736 SBNO2Q9Y2G9 1366 aa32.29■■■□□ 2.76
COL9A2-201ENST00000372736 HAP1P54257 671 aaPredicted RBP32.28■■■□□ 2.76
COL9A2-201ENST00000372736 RBM6P78332 1123 aaKnown RBP32.28■■■□□ 2.76
COL9A2-201ENST00000372736 RGS12O14924 1447 aa32.27■■■□□ 2.76
COL9A2-201ENST00000372736 PAK3O75914 559 aaPredicted RBP32.27■■■□□ 2.76
COL9A2-201ENST00000372736 TRPC5Q9UL62 973 aaPredicted RBP32.26■■■□□ 2.75
COL9A2-201ENST00000372736 NWD2Q9ULI1 1742 aa32.26■■■□□ 2.75
COL9A2-201ENST00000372736 CLSPNQ9HAW4 1339 aa32.26■■■□□ 2.75
COL9A2-201ENST00000372736 PHRF1Q9P1Y6 1649 aaKnown RBP32.25■■■□□ 2.75
COL9A2-201ENST00000372736 CABP1Q9NZU7 370 aa32.21■■■□□ 2.75
COL9A2-201ENST00000372736 COL14A1Q05707 1796 aaKnown RBP32.19■■■□□ 2.74
COL9A2-201ENST00000372736 NRAPQ86VF7 1730 aa32.18■■■□□ 2.74
COL9A2-201ENST00000372736 AKAP12Q02952 1782 aa32.18■■■□□ 2.74
COL9A2-201ENST00000372736 UNC5CLQ8IV45 518 aa32.18■■■□□ 2.74
COL9A2-201ENST00000372736 USP6P35125 1406 aa32.17■■■□□ 2.74
COL9A2-201ENST00000372736 ATAD2Q6PL18 1390 aa32.17■■■□□ 2.74
COL9A2-201ENST00000372736 GLI3P10071 1580 aa32.16■■■□□ 2.74
COL9A2-201ENST00000372736 BRD4O60885 1362 aaPredicted RBP32.16■■■□□ 2.74
COL9A2-201ENST00000372736 FAM83GA6ND36 823 aa32.15■■■□□ 2.74
COL9A2-201ENST00000372736 NRKQ7Z2Y5 1582 aa32.15■■■□□ 2.74
COL9A2-201ENST00000372736 NUTM2GQ5VZR2 741 aa32.13■■■□□ 2.73
COL9A2-201ENST00000372736 SSH2Q76I76 1423 aa32.13■■■□□ 2.73
COL9A2-201ENST00000372736 GJD4Q96KN9 370 aaPredicted RBP32.11■■■□□ 2.73
COL9A2-201ENST00000372736 TIMELESSQ9UNS1 1208 aa32.11■■■□□ 2.73
COL9A2-201ENST00000372736 USP19O94966 1318 aa32.1■■■□□ 2.73
COL9A2-201ENST00000372736 ABTB2Q8N961 1025 aa32.1■■■□□ 2.73
COL9A2-201ENST00000372736 PIK3C2AO00443 1686 aa32.1■■■□□ 2.73
COL9A2-201ENST00000372736 MON2Q7Z3U7 1717 aa32.08■■■□□ 2.73
COL9A2-201ENST00000372736 CPSF1Q10570 1443 aaKnown RBP32.08■■■□□ 2.73
COL9A2-201ENST00000372736 TESK2Q96S53 571 aa32.07■■■□□ 2.72
COL9A2-201ENST00000372736 KIAA0232Q92628 1395 aa32.07■■■□□ 2.72
COL9A2-201ENST00000372736 VPS72Q15906 364 aa32.06■■■□□ 2.72
COL9A2-201ENST00000372736 ST20-MTHFSA0A0A6YYL1 179 aa32.05■■■□□ 2.72
COL9A2-201ENST00000372736 PRDM11Q9NQV5 511 aa32.05■■■□□ 2.72
COL9A2-201ENST00000372736 BTG4Q9NY30 223 aa32.04■■■□□ 2.72
COL9A2-201ENST00000372736 USP47Q96K76 1375 aa32.04■■■□□ 2.72
COL9A2-201ENST00000372736 CD163L1Q9NR16 1453 aa32.03■■■□□ 2.72
COL9A2-201ENST00000372736 SLIT3O75094 1523 aa32.02■■■□□ 2.72
COL9A2-201ENST00000372736 NLRP13Q86W25 1043 aa32.01■■■□□ 2.71
COL9A2-201ENST00000372736 CCER1Q8TC90 406 aaPredicted RBP32.01■■■□□ 2.71
COL9A2-201ENST00000372736 UPF1Q92900 1129 aaKnown RBP eCLIP32.01■■■□□ 2.71
COL9A2-201ENST00000372736 ZNF692Q9BU19 519 aaPredicted RBP32.01■■■□□ 2.71
COL9A2-201ENST00000372736 LMO7Q8WWI1 1683 aa31.99■■■□□ 2.71
COL9A2-201ENST00000372736 CPDO75976 1380 aa31.99■■■□□ 2.71
COL9A2-201ENST00000372736 KTN1Q86UP2 1357 aaKnown RBP31.99■■■□□ 2.71
COL9A2-201ENST00000372736 ZC3H6P61129 1189 aaKnown RBP31.99■■■□□ 2.71
COL9A2-201ENST00000372736 TTC21BQ7Z4L5 1316 aa31.99■■■□□ 2.71
COL9A2-201ENST00000372736 CHRNA2Q15822 529 aa31.98■■■□□ 2.71
COL9A2-201ENST00000372736 PUS7Q96PZ0 661 aaKnown RBP31.98■■■□□ 2.71
COL9A2-201ENST00000372736 BRWD3Q6RI45 1802 aa31.96■■■□□ 2.71
COL9A2-201ENST00000372736 GCP02774 474 aa31.95■■■□□ 2.71
COL9A2-201ENST00000372736 NLRP6P59044 892 aa31.95■■■□□ 2.71
COL9A2-201ENST00000372736 CCDC9Q9Y3X0 531 aaKnown RBP31.95■■■□□ 2.71
COL9A2-201ENST00000372736 TTC21AQ8NDW8 1320 aa31.95■■■□□ 2.7
COL9A2-201ENST00000372736 EP400Q96L91 3159 aa31.93■■■□□ 2.7
COL9A2-201ENST00000372736 USP54Q70EL1 1684 aa31.92■■■□□ 2.7
COL9A2-201ENST00000372736 CAMTA1Q9Y6Y1 1673 aa31.92■■■□□ 2.7
COL9A2-201ENST00000372736 TMC1Q8TDI8 760 aa31.92■■■□□ 2.7
COL9A2-201ENST00000372736 SLC12A5Q9H2X9 1139 aa31.92■■■□□ 2.7
COL9A2-201ENST00000372736 ONECUT3O60422 494 aaPredicted RBP31.9■■■□□ 2.7
COL9A2-201ENST00000372736 SLC24A1O60721 1099 aa31.9■■■□□ 2.7
COL9A2-201ENST00000372736 SPATA31A5Q5VU36 1347 aa31.9■■■□□ 2.7
COL9A2-201ENST00000372736 SPATA31A7Q8IWB4 1347 aa31.9■■■□□ 2.7
COL9A2-201ENST00000372736 A0A1W2PP64 1363 aa31.9■■■□□ 2.7
COL9A2-201ENST00000372736 NINLQ9Y2I6 1382 aa31.9■■■□□ 2.7
COL9A2-201ENST00000372736 SEPT12Q8IYM1 358 aa31.88■■■□□ 2.69
COL9A2-201ENST00000372736 THSD7AQ9UPZ6 1657 aa31.87■■■□□ 2.69
COL9A2-201ENST00000372736 EDC4Q6P2E9 1401 aaKnown RBP31.87■■■□□ 2.69
COL9A2-201ENST00000372736 NFAT5O94916 1531 aa31.86■■■□□ 2.69
COL9A2-201ENST00000372736 HDGFL2Q7Z4V5 671 aaPredicted RBP31.86■■■□□ 2.69
COL9A2-201ENST00000372736 COL18A1P39060 1754 aa31.85■■■□□ 2.69
COL9A2-201ENST00000372736 STRN4Q9NRL3 753 aa31.84■■■□□ 2.69
COL9A2-201ENST00000372736 TERF2IPQ9NYB0 399 aa31.84■■■□□ 2.69
COL9A2-201ENST00000372736 USP31Q70CQ4 1352 aa31.83■■■□□ 2.69
COL9A2-201ENST00000372736 TMF1P82094 1093 aa31.83■■■□□ 2.69
COL9A2-201ENST00000372736 FAM98CQ17RN3 349 aaKnown RBP31.83■■■□□ 2.69
COL9A2-201ENST00000372736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.83■■■□□ 2.69
COL9A2-201ENST00000372736 COL5A2P05997 1499 aaPredicted RBP31.83■■■□□ 2.69
COL9A2-201ENST00000372736 SPATA31A1Q5TZJ5 1347 aa31.82■■■□□ 2.68
COL9A2-201ENST00000372736 AATKQ6ZMQ8 1374 aa31.81■■■□□ 2.68
COL9A2-201ENST00000372736 NME9Q86XW9 330 aa31.79■■■□□ 2.68
COL9A2-201ENST00000372736 ZRANB1Q9UGI0 708 aa31.79■■■□□ 2.68
COL9A2-201ENST00000372736 KCNH5Q8NCM2 988 aa31.78■■■□□ 2.68
COL9A2-201ENST00000372736 MYOM1P52179 1685 aa31.77■■■□□ 2.68
COL9A2-201ENST00000372736 LARP1Q6PKG0 1096 aaKnown RBP31.77■■■□□ 2.68
COL9A2-201ENST00000372736 A0A0G2JS52 829 aa31.76■■■□□ 2.67
COL9A2-201ENST00000372736 ZBTB7CA1YPR0 619 aa31.76■■■□□ 2.67
COL9A2-201ENST00000372736 EVA1CP58658 441 aa31.76■■■□□ 2.67
COL9A2-201ENST00000372736 MYT1Q01538 1121 aa31.76■■■□□ 2.67
COL9A2-201ENST00000372736 ARHGEF25Q86VW2 580 aa31.76■■■□□ 2.67
COL9A2-201ENST00000372736 ANKRD36BQ8N2N9 1353 aa31.76■■■□□ 2.67
COL9A2-201ENST00000372736 OVOS2A0A0J9YW53 1432 aa31.75■■■□□ 2.67
COL9A2-201ENST00000372736 OVOS2Q6IE36 1432 aa31.75■■■□□ 2.67
COL9A2-201ENST00000372736 ABCC6O95255 1503 aa31.75■■■□□ 2.67
COL9A2-201ENST00000372736 RGPD5Q99666 1765 aa31.74■■■□□ 2.67
COL9A2-201ENST00000372736 SOX12O15370 315 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms