RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 COG6Q9Y2V7 657 aa22.18■■□□□ 1.14
RTCA-203ENST00000370128 RGS3P49796 1198 aa22.17■■□□□ 1.14
RTCA-203ENST00000370128 YTHDC2Q9H6S0 1430 aaKnown RBP22.17■■□□□ 1.14
RTCA-203ENST00000370128 CLUAP1Q96AJ1 413 aa22.16■■□□□ 1.14
RTCA-203ENST00000370128 PRAM1Q96QH2 718 aa22.16■■□□□ 1.14
RTCA-203ENST00000370128 FRAT2O75474 233 aaPredicted RBP22.16■■□□□ 1.14
RTCA-203ENST00000370128 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
RTCA-203ENST00000370128 ATAD2Q6PL18 1390 aa22.16■■□□□ 1.14
RTCA-203ENST00000370128 ADGRB2O60241 1585 aa22.16■■□□□ 1.14
RTCA-203ENST00000370128 GGNBP2Q9H3C7 697 aa22.15■■□□□ 1.14
RTCA-203ENST00000370128 CD163L1Q9NR16 1453 aa22.14■■□□□ 1.13
RTCA-203ENST00000370128 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
RTCA-203ENST00000370128 CLTCQ00610 1675 aaKnown RBP22.14■■□□□ 1.13
RTCA-203ENST00000370128 L1TD1Q5T7N2 865 aaKnown RBP22.13■■□□□ 1.13
RTCA-203ENST00000370128 POGKQ9P215 609 aa22.13■■□□□ 1.13
RTCA-203ENST00000370128 ALKQ9UM73 1620 aa22.12■■□□□ 1.13
RTCA-203ENST00000370128 TERF2IPQ9NYB0 399 aa22.12■■□□□ 1.13
RTCA-203ENST00000370128 FYB1O15117 783 aa22.12■■□□□ 1.13
RTCA-203ENST00000370128 COL3A1P02461 1466 aaPredicted RBP22.11■■□□□ 1.13
RTCA-203ENST00000370128 NLRP1Q9C000 1473 aa22.11■■□□□ 1.13
RTCA-203ENST00000370128 MYH16Q9H6N6 1097 aa22.11■■□□□ 1.13
RTCA-203ENST00000370128 MED14O60244 1454 aa22.1■■□□□ 1.13
RTCA-203ENST00000370128 RLBP1P12271 317 aa22.1■■□□□ 1.13
RTCA-203ENST00000370128 PLEKHF1Q96S99 279 aa22.1■■□□□ 1.13
RTCA-203ENST00000370128 BCL2L13Q9BXK5 485 aa22.09■■□□□ 1.13
RTCA-203ENST00000370128 ANKRD26Q9UPS8 1709 aa22.09■■□□□ 1.13
RTCA-203ENST00000370128 TNNQ9UQP3 1299 aa22.09■■□□□ 1.13
RTCA-203ENST00000370128 FAM69CQ0P6D2 419 aa22.08■■□□□ 1.13
RTCA-203ENST00000370128 TAF7LQ5H9L4 462 aa22.08■■□□□ 1.13
RTCA-203ENST00000370128 ARHGEF40Q8TER5 1519 aa22.08■■□□□ 1.13
RTCA-203ENST00000370128 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
RTCA-203ENST00000370128 CDK19Q9BWU1 502 aa22.07■■□□□ 1.12
RTCA-203ENST00000370128 SLC4A3P48751 1232 aa22.06■■□□□ 1.12
RTCA-203ENST00000370128 STAG3Q9UJ98 1225 aa22.06■■□□□ 1.12
RTCA-203ENST00000370128 DIP2BQ9P265 1576 aa22.05■■□□□ 1.12
RTCA-203ENST00000370128 TMPOP42166 694 aaKnown RBP22.05■■□□□ 1.12
RTCA-203ENST00000370128 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
RTCA-203ENST00000370128 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
RTCA-203ENST00000370128 CABP1Q9NZU7 370 aa22.04■■□□□ 1.12
RTCA-203ENST00000370128 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
RTCA-203ENST00000370128 PCDHB15Q9Y5E8 787 aa22.04■■□□□ 1.12
RTCA-203ENST00000370128 TPM2P07951 284 aa22.03■■□□□ 1.12
RTCA-203ENST00000370128 MAPK8IP3Q9UPT6 1336 aa22.03■■□□□ 1.12
RTCA-203ENST00000370128 AGLP35573 1532 aa22.03■■□□□ 1.12
RTCA-203ENST00000370128 TSR2Q969E8 191 aaKnown RBP22.03■■□□□ 1.12
RTCA-203ENST00000370128 PPP6R1Q9UPN7 881 aa22.03■■□□□ 1.12
RTCA-203ENST00000370128 PMFBP1Q8TBY8 1022 aa22.02■■□□□ 1.12
RTCA-203ENST00000370128 PNPLA6Q8IY17 1366 aa22.02■■□□□ 1.12
RTCA-203ENST00000370128 A2ML1A8K2U0 1454 aa22.01■■□□□ 1.11
RTCA-203ENST00000370128 CT47B1P0C2W7 299 aaPredicted RBP22.01■■□□□ 1.11
RTCA-203ENST00000370128 VIRMAQ69YN4 1812 aaKnown RBP22■■□□□ 1.11
RTCA-203ENST00000370128 TSPOAP1O95153 1857 aa22■■□□□ 1.11
RTCA-203ENST00000370128 DLC1Q96QB1 1528 aa21.99■■□□□ 1.11
RTCA-203ENST00000370128 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
RTCA-203ENST00000370128 SPATA31D1Q6ZQQ2 1576 aa21.99■■□□□ 1.11
RTCA-203ENST00000370128 BBXQ8WY36 941 aaPredicted RBP21.99■■□□□ 1.11
RTCA-203ENST00000370128 KIF20BQ96Q89 1820 aa21.98■■□□□ 1.11
RTCA-203ENST00000370128 EXOSC9Q06265 439 aaKnown RBP21.98■■□□□ 1.11
RTCA-203ENST00000370128 ZKSCAN2Q63HK3 967 aa21.98■■□□□ 1.11
RTCA-203ENST00000370128 MVPQ14764 893 aaKnown RBP21.98■■□□□ 1.11
RTCA-203ENST00000370128 WAPLQ7Z5K2 1190 aa21.98■■□□□ 1.11
RTCA-203ENST00000370128 SETD1AO15047 1707 aaKnown RBP21.97■■□□□ 1.11
RTCA-203ENST00000370128 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
RTCA-203ENST00000370128 IL16Q14005 1332 aa21.96■■□□□ 1.11
RTCA-203ENST00000370128 NAP1L2Q9ULW6 460 aaPredicted RBP21.96■■□□□ 1.11
RTCA-203ENST00000370128 RIMBP3CA6NJZ7 1639 aa21.96■■□□□ 1.11
RTCA-203ENST00000370128 RIMBP3BA6NNM3 1639 aa21.96■■□□□ 1.11
RTCA-203ENST00000370128 RIMBP3Q9UFD9 1639 aa21.96■■□□□ 1.11
RTCA-203ENST00000370128 USP19O94966 1318 aa21.95■■□□□ 1.1
RTCA-203ENST00000370128 RIPK4P57078 832 aa21.95■■□□□ 1.1
RTCA-203ENST00000370128 DZIP1LQ8IYY4 767 aaKnown RBP21.95■■□□□ 1.1
RTCA-203ENST00000370128 ATP7BP35670 1465 aa21.94■■□□□ 1.1
RTCA-203ENST00000370128 SMC4Q9NTJ3 1288 aa21.94■■□□□ 1.1
RTCA-203ENST00000370128 GTF2E1P29083 439 aaPredicted RBP21.94■■□□□ 1.1
RTCA-203ENST00000370128 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
RTCA-203ENST00000370128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.94■■□□□ 1.1
RTCA-203ENST00000370128 FTSJ3Q8IY81 847 aaKnown RBP21.93■■□□□ 1.1
RTCA-203ENST00000370128 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
RTCA-203ENST00000370128 RWDD1Q9H446 243 aaPredicted RBP21.93■■□□□ 1.1
RTCA-203ENST00000370128 CDC42BPGQ6DT37 1551 aa21.93■■□□□ 1.1
RTCA-203ENST00000370128 SEC24BO95487 1268 aa21.92■■□□□ 1.1
RTCA-203ENST00000370128 PDZRN3Q9UPQ7 1066 aa21.92■■□□□ 1.1
RTCA-203ENST00000370128 FCHSD2O94868 740 aa21.91■■□□□ 1.1
RTCA-203ENST00000370128 TRIM27P14373 513 aa21.91■■□□□ 1.1
RTCA-203ENST00000370128 FBLN1P23142 703 aa21.91■■□□□ 1.1
RTCA-203ENST00000370128 POLKQ9UBT6 870 aa21.91■■□□□ 1.1
RTCA-203ENST00000370128 MLECQ14165 292 aa21.91■■□□□ 1.1
RTCA-203ENST00000370128 ZMYM3Q14202 1370 aa21.9■■□□□ 1.1
RTCA-203ENST00000370128 LRRC7Q96NW7 1537 aa21.9■■□□□ 1.1
RTCA-203ENST00000370128 XRCC6P12956 609 aaKnown RBP eCLIP21.89■■□□□ 1.12e-10■□□□□ 9.5
RTCA-203ENST00000370128 NRXN3Q9Y4C0 1643 aa21.89■■□□□ 1.09
RTCA-203ENST00000370128 ATF7IPQ6VMQ6 1270 aa21.88■■□□□ 1.09
RTCA-203ENST00000370128 FAM135BQ49AJ0 1406 aa21.88■■□□□ 1.09
RTCA-203ENST00000370128 CPSF1Q10570 1443 aaKnown RBP21.87■■□□□ 1.09
RTCA-203ENST00000370128 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
RTCA-203ENST00000370128 SMAP1Q8IYB5 467 aaPredicted RBP21.86■■□□□ 1.09
RTCA-203ENST00000370128 NOB1Q9ULX3 412 aaKnown RBP21.86■■□□□ 1.09
RTCA-203ENST00000370128 METP08581 1390 aa21.86■■□□□ 1.09
RTCA-203ENST00000370128 WASLO00401 505 aaPredicted RBP21.86■■□□□ 1.09
RTCA-203ENST00000370128 DDX19BQ9UMR2 479 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms