RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 CARD14Q9BXL6 1004 aa34.39■■■■□ 3.1
NSMCE4A-201ENST00000369017 PXDNQ92626 1479 aa34.39■■■■□ 3.1
NSMCE4A-201ENST00000369017 LRRC59Q96AG4 307 aaKnown RBP34.38■■■■□ 3.09
NSMCE4A-201ENST00000369017 SSH2Q76I76 1423 aa34.37■■■■□ 3.09
NSMCE4A-201ENST00000369017 NRKQ7Z2Y5 1582 aa34.36■■■■□ 3.09
NSMCE4A-201ENST00000369017 PHLPP1O60346 1717 aa34.36■■■■□ 3.09
NSMCE4A-201ENST00000369017 XPCQ01831 940 aaPredicted RBP34.36■■■■□ 3.09
NSMCE4A-201ENST00000369017 PER1O15534 1290 aaPredicted RBP34.35■■■■□ 3.09
NSMCE4A-201ENST00000369017 DDX17Q92841 729 aaKnown RBP34.35■■■■□ 3.09
NSMCE4A-201ENST00000369017 ARHGEF10O15013 1369 aa34.35■■■■□ 3.09
NSMCE4A-201ENST00000369017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.34■■■■□ 3.09
NSMCE4A-201ENST00000369017 NSD2O96028 1365 aa34.34■■■■□ 3.09
NSMCE4A-201ENST00000369017 TRPM3Q9HCF6 1732 aaPredicted RBP34.33■■■■□ 3.09
NSMCE4A-201ENST00000369017 ABTB2Q8N961 1025 aa34.33■■■■□ 3.09
NSMCE4A-201ENST00000369017 TNS3Q68CZ2 1445 aa34.32■■■■□ 3.08
NSMCE4A-201ENST00000369017 FBXO41Q8TF61 875 aa34.32■■■■□ 3.08
NSMCE4A-201ENST00000369017 SPATA31A3Q5VYP0 1347 aa34.31■■■■□ 3.08
NSMCE4A-201ENST00000369017 LMOD2Q6P5Q4 547 aa34.3■■■■□ 3.08
NSMCE4A-201ENST00000369017 NPC1L1Q9UHC9 1359 aa34.3■■■■□ 3.08
NSMCE4A-201ENST00000369017 NLRP13Q86W25 1043 aa34.29■■■■□ 3.08
NSMCE4A-201ENST00000369017 KIF20BQ96Q89 1820 aa34.27■■■■□ 3.08
NSMCE4A-201ENST00000369017 FYB1O15117 783 aa34.26■■■■□ 3.08
NSMCE4A-201ENST00000369017 COG3Q96JB2 828 aa34.26■■■■□ 3.08
NSMCE4A-201ENST00000369017 NLRP6P59044 892 aa34.25■■■■□ 3.07
NSMCE4A-201ENST00000369017 COL16A1Q07092 1604 aaPredicted RBP34.25■■■■□ 3.07
NSMCE4A-201ENST00000369017 ALS2Q96Q42 1657 aa34.25■■■■□ 3.07
NSMCE4A-201ENST00000369017 AMER1Q5JTC6 1135 aaPredicted RBP34.24■■■■□ 3.07
NSMCE4A-201ENST00000369017 USP31Q70CQ4 1352 aa34.23■■■■□ 3.07
NSMCE4A-201ENST00000369017 NME9Q86XW9 330 aa34.23■■■■□ 3.07
NSMCE4A-201ENST00000369017 PIK3C2AO00443 1686 aa34.2■■■■□ 3.07
NSMCE4A-201ENST00000369017 GGNBP2Q9H3C7 697 aa34.2■■■■□ 3.07
NSMCE4A-201ENST00000369017 ANKRD26Q9UPS8 1709 aa34.18■■■■□ 3.06
NSMCE4A-201ENST00000369017 CC2D1BQ5T0F9 858 aaKnown RBP34.17■■■■□ 3.06
NSMCE4A-201ENST00000369017 USP54Q70EL1 1684 aa34.17■■■■□ 3.06
NSMCE4A-201ENST00000369017 MORC1Q86VD1 984 aa34.17■■■■□ 3.06
NSMCE4A-201ENST00000369017 KCNH5Q8NCM2 988 aa34.17■■■■□ 3.06
NSMCE4A-201ENST00000369017 JCADQ9P266 1359 aa34.16■■■■□ 3.06
NSMCE4A-201ENST00000369017 HSPA1LP34931 641 aa34.16■■■■□ 3.06
NSMCE4A-201ENST00000369017 OVOS2A0A0J9YW53 1432 aa34.14■■■■□ 3.06
NSMCE4A-201ENST00000369017 OVOS2Q6IE36 1432 aa34.14■■■■□ 3.06
NSMCE4A-201ENST00000369017 ANP32CO43423 234 aa34.13■■■■□ 3.05
NSMCE4A-201ENST00000369017 NUTM2GQ5VZR2 741 aa34.13■■■■□ 3.05
NSMCE4A-201ENST00000369017 DIEXFQ68CQ4 756 aaKnown RBP34.13■■■■□ 3.05
NSMCE4A-201ENST00000369017 MED1Q15648 1581 aaPredicted RBP34.12■■■■□ 3.05
NSMCE4A-201ENST00000369017 HAP1P54257 671 aaPredicted RBP34.12■■■■□ 3.05
NSMCE4A-201ENST00000369017 RALBP1Q15311 655 aa34.12■■■■□ 3.05
NSMCE4A-201ENST00000369017 PNPLA6Q8IY17 1366 aa34.11■■■■□ 3.05
NSMCE4A-201ENST00000369017 COL22A1Q8NFW1 1626 aaPredicted RBP34.11■■■■□ 3.05
NSMCE4A-201ENST00000369017 USP19O94966 1318 aa34.1■■■■□ 3.05
NSMCE4A-201ENST00000369017 SHPRHQ149N8 1683 aa34.1■■■■□ 3.05
NSMCE4A-201ENST00000369017 ZRANB1Q9UGI0 708 aa34.07■■■■□ 3.04
NSMCE4A-201ENST00000369017 SPATA31A6Q5VVP1 1343 aa34.06■■■■□ 3.04
NSMCE4A-201ENST00000369017 CNGB1Q14028 1251 aaPredicted RBP34.06■■■■□ 3.04
NSMCE4A-201ENST00000369017 SLIT3O75094 1523 aa34.05■■■■□ 3.04
NSMCE4A-201ENST00000369017 GCP02774 474 aa34.05■■■■□ 3.04
NSMCE4A-201ENST00000369017 AATKQ6ZMQ8 1374 aa34.03■■■■□ 3.04
NSMCE4A-201ENST00000369017 PARD3Q8TEW0 1356 aa34.02■■■■□ 3.04
NSMCE4A-201ENST00000369017 MARF1Q9Y4F3 1742 aaKnown RBP34.01■■■■□ 3.04
NSMCE4A-201ENST00000369017 PRKRIP1Q9H875 184 aaPredicted RBP34.01■■■■□ 3.03
NSMCE4A-201ENST00000369017 PHRF1Q9P1Y6 1649 aaKnown RBP34.01■■■■□ 3.03
NSMCE4A-201ENST00000369017 PLEKHG5O94827 1062 aa33.99■■■■□ 3.03
NSMCE4A-201ENST00000369017 CRYBG1Q9Y4K1 1723 aa33.99■■■■□ 3.03
NSMCE4A-201ENST00000369017 TNNT2P45379 298 aaPredicted RBP33.98■■■■□ 3.03
NSMCE4A-201ENST00000369017 CABLES1Q8TDN4 633 aa33.98■■■■□ 3.03
NSMCE4A-201ENST00000369017 SOX12O15370 315 aa33.96■■■■□ 3.03
NSMCE4A-201ENST00000369017 ABCA3Q99758 1704 aa33.96■■■■□ 3.03
NSMCE4A-201ENST00000369017 KIF24Q5T7B8 1368 aa33.95■■■■□ 3.02
NSMCE4A-201ENST00000369017 MYBBP1AQ9BQG0 1328 aaKnown RBP33.94■■■■□ 3.02
NSMCE4A-201ENST00000369017 CPDO75976 1380 aa33.94■■■■□ 3.02
NSMCE4A-201ENST00000369017 NFAT5O94916 1531 aa33.94■■■■□ 3.02
NSMCE4A-201ENST00000369017 NUTM2BA6NNL0 878 aaPredicted RBP33.9■■■■□ 3.02
NSMCE4A-201ENST00000369017 NUTM2EB1AL46 878 aaPredicted RBP33.9■■■■□ 3.02
NSMCE4A-201ENST00000369017 ZC3H6P61129 1189 aaKnown RBP33.9■■■■□ 3.02
NSMCE4A-201ENST00000369017 NUTM2AQ8IVF1 878 aaPredicted RBP33.9■■■■□ 3.02
NSMCE4A-201ENST00000369017 MAP2P11137 1827 aaKnown RBP33.89■■■■□ 3.02
NSMCE4A-201ENST00000369017 PPP2R1AP30153 589 aa33.89■■■■□ 3.02
NSMCE4A-201ENST00000369017 AMPHP49418 695 aa33.89■■■■□ 3.02
NSMCE4A-201ENST00000369017 ARHGEF25Q86VW2 580 aa33.89■■■■□ 3.02
NSMCE4A-201ENST00000369017 PRDM11Q9NQV5 511 aa33.89■■■■□ 3.02
NSMCE4A-201ENST00000369017 RTL1A6NKG5 1358 aa33.88■■■■□ 3.01
NSMCE4A-201ENST00000369017 CFAP53Q96M91 514 aa33.87■■■■□ 3.01
NSMCE4A-201ENST00000369017 POLKQ9UBT6 870 aa33.87■■■■□ 3.01
NSMCE4A-201ENST00000369017 ABCC6O95255 1503 aa33.87■■■■□ 3.01
NSMCE4A-201ENST00000369017 MAP3K19Q56UN5 1328 aa33.86■■■■□ 3.01
NSMCE4A-201ENST00000369017 LTN1O94822 1766 aa33.86■■■■□ 3.01
NSMCE4A-201ENST00000369017 RRS1Q15050 365 aaKnown RBP33.86■■■■□ 3.01
NSMCE4A-201ENST00000369017 KIAA0232Q92628 1395 aa33.85■■■■□ 3.01
NSMCE4A-201ENST00000369017 FLT4P35916 1363 aa33.85■■■■□ 3.01
NSMCE4A-201ENST00000369017 ZBTB7CA1YPR0 619 aa33.84■■■■□ 3.01
NSMCE4A-201ENST00000369017 PPM1GO15355 546 aaPredicted RBP33.84■■■■□ 3.01
NSMCE4A-201ENST00000369017 MTHFSP49914 203 aa33.83■■■■□ 3.01
NSMCE4A-201ENST00000369017 SMG6Q86US8 1419 aaKnown RBP33.83■■■■□ 3.01
NSMCE4A-201ENST00000369017 MEX3CQ5U5Q3 659 aaKnown RBP33.82■■■■□ 3
NSMCE4A-201ENST00000369017 IP6K1Q92551 441 aa33.82■■■■□ 3
NSMCE4A-201ENST00000369017 ADAMTS2O95450 1211 aa33.81■■■■□ 3
NSMCE4A-201ENST00000369017 BLMP54132 1417 aaPredicted RBP33.8■■■■□ 3
NSMCE4A-201ENST00000369017 EMILIN1Q9Y6C2 1016 aa33.8■■■■□ 3
NSMCE4A-201ENST00000369017 COL14A1Q05707 1796 aaKnown RBP33.8■■■■□ 3
NSMCE4A-201ENST00000369017 FBLN1P23142 703 aa33.79■■■■□ 3
NSMCE4A-201ENST00000369017 CDK12Q9NYV4 1490 aaPredicted RBP33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms