RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ABCA3Q99758 1704 aa26.03■■□□□ 1.76
CHTOP-202ENST00000368687 PAK3O75914 559 aaPredicted RBP26.03■■□□□ 1.76
CHTOP-202ENST00000368687 HAP1P54257 671 aaPredicted RBP26.03■■□□□ 1.76
CHTOP-202ENST00000368687 CABP1Q9NZU7 370 aa26.02■■□□□ 1.76
CHTOP-202ENST00000368687 RXRBP28702 533 aa26.01■■□□□ 1.75
CHTOP-202ENST00000368687 TESK2Q96S53 571 aa26.01■■□□□ 1.75
CHTOP-202ENST00000368687 ZNF692Q9BU19 519 aaPredicted RBP26.01■■□□□ 1.75
CHTOP-202ENST00000368687 NINLQ9Y2I6 1382 aa26.01■■□□□ 1.75
CHTOP-202ENST00000368687 AKAP12Q02952 1782 aa26■■□□□ 1.75
CHTOP-202ENST00000368687 USP6P35125 1406 aa25.99■■□□□ 1.75
CHTOP-202ENST00000368687 QTRT2Q9H974 415 aaKnown RBP25.99■■□□□ 1.75
CHTOP-202ENST00000368687 FNBP4Q8N3X1 1017 aaPredicted RBP25.98■■□□□ 1.75
CHTOP-202ENST00000368687 TMF1P82094 1093 aa25.97■■□□□ 1.75
CHTOP-202ENST00000368687 CDCA8Q53HL2 280 aa25.97■■□□□ 1.75
CHTOP-202ENST00000368687 USP21Q9UK80 565 aa25.96■■□□□ 1.75
CHTOP-202ENST00000368687 CRYBG1Q9Y4K1 1723 aa25.96■■□□□ 1.75
CHTOP-202ENST00000368687 CDK12Q9NYV4 1490 aaPredicted RBP25.96■■□□□ 1.75
CHTOP-202ENST00000368687 CPSF1Q10570 1443 aaKnown RBP25.94■■□□□ 1.74
CHTOP-202ENST00000368687 ABTB2Q8N961 1025 aa25.93■■□□□ 1.74
CHTOP-202ENST00000368687 MON2Q7Z3U7 1717 aa25.93■■□□□ 1.74
CHTOP-202ENST00000368687 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.93■■□□□ 1.74
CHTOP-202ENST00000368687 NWD2Q9ULI1 1742 aa25.92■■□□□ 1.74
CHTOP-202ENST00000368687 RBM6P78332 1123 aaKnown RBP25.92■■□□□ 1.74
CHTOP-202ENST00000368687 CABLES1Q8TDN4 633 aa25.92■■□□□ 1.74
CHTOP-202ENST00000368687 PHRF1Q9P1Y6 1649 aaKnown RBP25.92■■□□□ 1.74
CHTOP-202ENST00000368687 BCL9LQ86UU0 1499 aa25.91■■□□□ 1.74
CHTOP-202ENST00000368687 RGS12O14924 1447 aa25.91■■□□□ 1.74
CHTOP-202ENST00000368687 TERF2IPQ9NYB0 399 aa25.91■■□□□ 1.74
CHTOP-202ENST00000368687 TTC21AQ8NDW8 1320 aa25.9■■□□□ 1.74
CHTOP-202ENST00000368687 ATRNO75882 1429 aa25.9■■□□□ 1.74
CHTOP-202ENST00000368687 SSH2Q76I76 1423 aa25.9■■□□□ 1.74
CHTOP-202ENST00000368687 PLEKHG5O94827 1062 aa25.9■■□□□ 1.74
CHTOP-202ENST00000368687 HDGFL2Q7Z4V5 671 aaPredicted RBP25.9■■□□□ 1.74
CHTOP-202ENST00000368687 NLRP13Q86W25 1043 aa25.9■■□□□ 1.74
CHTOP-202ENST00000368687 KTN1Q86UP2 1357 aaKnown RBP25.9■■□□□ 1.74
CHTOP-202ENST00000368687 NRKQ7Z2Y5 1582 aa25.9■■□□□ 1.74
CHTOP-202ENST00000368687 EIF4G2P78344 907 aaKnown RBP eCLIP25.89■■□□□ 1.74
CHTOP-202ENST00000368687 TMC1Q8TDI8 760 aa25.89■■□□□ 1.74
CHTOP-202ENST00000368687 TRPC5Q9UL62 973 aaPredicted RBP25.89■■□□□ 1.74
CHTOP-202ENST00000368687 SLIT2O94813 1529 aa25.88■■□□□ 1.73
CHTOP-202ENST00000368687 COL14A1Q05707 1796 aaKnown RBP25.88■■□□□ 1.73
CHTOP-202ENST00000368687 PLCH1Q4KWH8 1693 aa25.87■■□□□ 1.73
CHTOP-202ENST00000368687 USP19O94966 1318 aa25.87■■□□□ 1.73
CHTOP-202ENST00000368687 PIK3C2AO00443 1686 aa25.85■■□□□ 1.73
CHTOP-202ENST00000368687 TTC21BQ7Z4L5 1316 aa25.85■■□□□ 1.73
CHTOP-202ENST00000368687 CD163L1Q9NR16 1453 aa25.85■■□□□ 1.73
CHTOP-202ENST00000368687 EDC4Q6P2E9 1401 aaKnown RBP25.84■■□□□ 1.73
CHTOP-202ENST00000368687 UNC5CLQ8IV45 518 aa25.83■■□□□ 1.73
CHTOP-202ENST00000368687 SLC12A5Q9H2X9 1139 aa25.83■■□□□ 1.73
CHTOP-202ENST00000368687 NLRP6P59044 892 aa25.81■■□□□ 1.72
CHTOP-202ENST00000368687 NUTM2GQ5VZR2 741 aa25.81■■□□□ 1.72
CHTOP-202ENST00000368687 PRDM11Q9NQV5 511 aa25.81■■□□□ 1.72
CHTOP-202ENST00000368687 A0A1W2PP64 1363 aa25.81■■□□□ 1.72
CHTOP-202ENST00000368687 CPDO75976 1380 aa25.81■■□□□ 1.72
CHTOP-202ENST00000368687 SLIT3O75094 1523 aa25.8■■□□□ 1.72
CHTOP-202ENST00000368687 UPF1Q92900 1129 aaKnown RBP eCLIP25.8■■□□□ 1.725e-12■□□□□ 10.2
CHTOP-202ENST00000368687 USP54Q70EL1 1684 aa25.8■■□□□ 1.72
CHTOP-202ENST00000368687 ANKRD36BQ8N2N9 1353 aa25.8■■□□□ 1.72
CHTOP-202ENST00000368687 FAM83GA6ND36 823 aa25.79■■□□□ 1.72
CHTOP-202ENST00000368687 KIAA0232Q92628 1395 aa25.78■■□□□ 1.72
CHTOP-202ENST00000368687 GCP02774 474 aa25.77■■□□□ 1.72
CHTOP-202ENST00000368687 KCNH5Q8NCM2 988 aa25.77■■□□□ 1.72
CHTOP-202ENST00000368687 GJD4Q96KN9 370 aaPredicted RBP25.77■■□□□ 1.72
CHTOP-202ENST00000368687 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
CHTOP-202ENST00000368687 HSPA5P11021 654 aaKnown RBP25.76■■□□□ 1.71
CHTOP-202ENST00000368687 USP31Q70CQ4 1352 aa25.75■■□□□ 1.71
CHTOP-202ENST00000368687 VPS72Q15906 364 aa25.74■■□□□ 1.71
CHTOP-202ENST00000368687 BTG4Q9NY30 223 aa25.73■■□□□ 1.71
CHTOP-202ENST00000368687 MYOM1P52179 1685 aa25.73■■□□□ 1.71
CHTOP-202ENST00000368687 GLI3P10071 1580 aa25.73■■□□□ 1.71
CHTOP-202ENST00000368687 ZC3H6P61129 1189 aaKnown RBP25.72■■□□□ 1.71
CHTOP-202ENST00000368687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.72■■□□□ 1.71
CHTOP-202ENST00000368687 ABCC6O95255 1503 aa25.69■■□□□ 1.7
CHTOP-202ENST00000368687 LMO7Q8WWI1 1683 aa25.69■■□□□ 1.7
CHTOP-202ENST00000368687 EP400Q96L91 3159 aa25.67■■□□□ 1.7
CHTOP-202ENST00000368687 AATKQ6ZMQ8 1374 aa25.67■■□□□ 1.7
CHTOP-202ENST00000368687 CCDC9Q9Y3X0 531 aaKnown RBP25.66■■□□□ 1.7
CHTOP-202ENST00000368687 NFAT5O94916 1531 aa25.66■■□□□ 1.7
CHTOP-202ENST00000368687 OVOS2A0A0J9YW53 1432 aa25.65■■□□□ 1.7
CHTOP-202ENST00000368687 OVOS2Q6IE36 1432 aa25.65■■□□□ 1.7
CHTOP-202ENST00000368687 CHRNA2Q15822 529 aa25.65■■□□□ 1.7
CHTOP-202ENST00000368687 NME9Q86XW9 330 aa25.65■■□□□ 1.7
CHTOP-202ENST00000368687 CAMTA1Q9Y6Y1 1673 aa25.62■■□□□ 1.69
CHTOP-202ENST00000368687 EVA1CP58658 441 aa25.62■■□□□ 1.69
CHTOP-202ENST00000368687 COG3Q96JB2 828 aa25.62■■□□□ 1.69
CHTOP-202ENST00000368687 KIF20BQ96Q89 1820 aa25.62■■□□□ 1.69
CHTOP-202ENST00000368687 ARHGEF25Q86VW2 580 aa25.61■■□□□ 1.69
CHTOP-202ENST00000368687 SPATA31A5Q5VU36 1347 aa25.61■■□□□ 1.69
CHTOP-202ENST00000368687 SPATA31A7Q8IWB4 1347 aa25.61■■□□□ 1.69
CHTOP-202ENST00000368687 COL5A2P05997 1499 aaPredicted RBP25.6■■□□□ 1.69
CHTOP-202ENST00000368687 COL18A1P39060 1754 aa25.59■■□□□ 1.69
CHTOP-202ENST00000368687 ONECUT3O60422 494 aaPredicted RBP25.59■■□□□ 1.69
CHTOP-202ENST00000368687 SEPT12Q8IYM1 358 aa25.59■■□□□ 1.69
CHTOP-202ENST00000368687 LTN1O94822 1766 aa25.59■■□□□ 1.69
CHTOP-202ENST00000368687 POLR3GLQ9BT43 218 aa25.58■■□□□ 1.69
CHTOP-202ENST00000368687 STRN4Q9NRL3 753 aa25.58■■□□□ 1.69
CHTOP-202ENST00000368687 NSD3Q9BZ95 1437 aa25.57■■□□□ 1.68
CHTOP-202ENST00000368687 ZBTB7CA1YPR0 619 aa25.56■■□□□ 1.68
CHTOP-202ENST00000368687 SOX12O15370 315 aa25.56■■□□□ 1.68
CHTOP-202ENST00000368687 ZRANB1Q9UGI0 708 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms