RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 WDR63Q8IWG1 891 aa22.83■■□□□ 1.25
LMNA-205ENST00000368299 PLIN1O60240 522 aa22.83■■□□□ 1.24
LMNA-205ENST00000368299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.8■■□□□ 1.24
LMNA-205ENST00000368299 ZNF692Q9BU19 519 aaPredicted RBP22.8■■□□□ 1.24
LMNA-205ENST00000368299 TBX22Q9Y458 520 aa22.8■■□□□ 1.24
LMNA-205ENST00000368299 PNNQ9H307 717 aaKnown RBP22.79■■□□□ 1.24
LMNA-205ENST00000368299 DIP2AQ14689 1571 aa22.79■■□□□ 1.24
LMNA-205ENST00000368299 DIAPH1O60610 1272 aaKnown RBP22.79■■□□□ 1.24
LMNA-205ENST00000368299 DMRT2Q9Y5R5 561 aa22.79■■□□□ 1.24
LMNA-205ENST00000368299 MSH5O43196 834 aa22.78■■□□□ 1.24
LMNA-205ENST00000368299 NEUROD2Q15784 382 aa22.78■■□□□ 1.24
LMNA-205ENST00000368299 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
LMNA-205ENST00000368299 MON2Q7Z3U7 1717 aa22.77■■□□□ 1.24
LMNA-205ENST00000368299 CRBNQ96SW2 442 aa22.77■■□□□ 1.23
LMNA-205ENST00000368299 RRP7AQ9Y3A4 280 aaKnown RBP22.77■■□□□ 1.23
LMNA-205ENST00000368299 SLC26A8Q96RN1 970 aa22.76■■□□□ 1.23
LMNA-205ENST00000368299 PTCH1Q13635 1447 aa22.75■■□□□ 1.23
LMNA-205ENST00000368299 PTPRUQ92729 1446 aa22.75■■□□□ 1.23
LMNA-205ENST00000368299 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.75■■□□□ 1.23
LMNA-205ENST00000368299 PLEKHF1Q96S99 279 aa22.75■■□□□ 1.23
LMNA-205ENST00000368299 AATKQ6ZMQ8 1374 aa22.75■■□□□ 1.23
LMNA-205ENST00000368299 AKAP12Q02952 1782 aa22.75■■□□□ 1.23
LMNA-205ENST00000368299 PRR36Q9H6K5 1346 aa22.74■■□□□ 1.23
LMNA-205ENST00000368299 ITSN1Q15811 1721 aa22.74■■□□□ 1.23
LMNA-205ENST00000368299 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
LMNA-205ENST00000368299 POLKQ9UBT6 870 aa22.74■■□□□ 1.23
LMNA-205ENST00000368299 MAPK8IP3Q9UPT6 1336 aa22.74■■□□□ 1.23
LMNA-205ENST00000368299 AMOTL2Q9Y2J4 779 aa22.73■■□□□ 1.23
LMNA-205ENST00000368299 MYH16Q9H6N6 1097 aa22.72■■□□□ 1.23
LMNA-205ENST00000368299 COG3Q96JB2 828 aa22.71■■□□□ 1.23
LMNA-205ENST00000368299 PLEKHG3A1L390 1219 aa22.71■■□□□ 1.23
LMNA-205ENST00000368299 C20orf194Q5TEA3 1177 aa22.71■■□□□ 1.23
LMNA-205ENST00000368299 NME9Q86XW9 330 aa22.71■■□□□ 1.23
LMNA-205ENST00000368299 TOPAZ1Q8N9V7 1692 aa22.7■■□□□ 1.23
LMNA-205ENST00000368299 FCHSD2O94868 740 aa22.7■■□□□ 1.22
LMNA-205ENST00000368299 NCKAP5LQ9HCH0 1330 aa22.7■■□□□ 1.22
LMNA-205ENST00000368299 CEP170BQ9Y4F5 1589 aaPredicted RBP22.7■■□□□ 1.22
LMNA-205ENST00000368299 TMPOP42166 694 aaKnown RBP22.69■■□□□ 1.22
LMNA-205ENST00000368299 CDK12Q9NYV4 1490 aaPredicted RBP22.69■■□□□ 1.22
LMNA-205ENST00000368299 PIK3R4Q99570 1358 aa22.68■■□□□ 1.22
LMNA-205ENST00000368299 MAP2P11137 1827 aaKnown RBP22.67■■□□□ 1.22
LMNA-205ENST00000368299 BCAR3O75815 825 aa22.66■■□□□ 1.22
LMNA-205ENST00000368299 PPM1GO15355 546 aaPredicted RBP22.66■■□□□ 1.22
LMNA-205ENST00000368299 NEFMP07197 916 aa22.65■■□□□ 1.22
LMNA-205ENST00000368299 PDE3AQ14432 1141 aa22.65■■□□□ 1.22
LMNA-205ENST00000368299 IL16Q14005 1332 aa22.65■■□□□ 1.22
LMNA-205ENST00000368299 RIMS1Q86UR5 1692 aaKnown RBP22.65■■□□□ 1.22
LMNA-205ENST00000368299 CT47B1P0C2W7 299 aaPredicted RBP22.65■■□□□ 1.22
LMNA-205ENST00000368299 ACEP12821 1306 aa22.64■■□□□ 1.22
LMNA-205ENST00000368299 XRN1Q8IZH2 1706 aaKnown RBP22.64■■□□□ 1.22
LMNA-205ENST00000368299 NRKQ7Z2Y5 1582 aa22.64■■□□□ 1.21
LMNA-205ENST00000368299 TTC21BQ7Z4L5 1316 aa22.63■■□□□ 1.21
LMNA-205ENST00000368299 USP6P35125 1406 aa22.63■■□□□ 1.21
LMNA-205ENST00000368299 EMILIN1Q9Y6C2 1016 aa22.62■■□□□ 1.21
LMNA-205ENST00000368299 RARSP54136 660 aaKnown RBP22.62■■□□□ 1.21
LMNA-205ENST00000368299 RSPH6AQ9H0K4 717 aa22.62■■□□□ 1.21
LMNA-205ENST00000368299 TRIM35Q9UPQ4 493 aa22.62■■□□□ 1.21
LMNA-205ENST00000368299 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
LMNA-205ENST00000368299 FBLN1P23142 703 aa22.61■■□□□ 1.21
LMNA-205ENST00000368299 ZRANB1Q9UGI0 708 aa22.61■■□□□ 1.21
LMNA-205ENST00000368299 TCERG1O14776 1098 aaKnown RBP22.61■■□□□ 1.21
LMNA-205ENST00000368299 RIPK4P57078 832 aa22.61■■□□□ 1.21
LMNA-205ENST00000368299 IL13P35225 146 aa22.6■■□□□ 1.21
LMNA-205ENST00000368299 CANXP27824 592 aaKnown RBP22.6■■□□□ 1.21
LMNA-205ENST00000368299 ZNF142P52746 1687 aaPredicted RBP22.59■■□□□ 1.21
LMNA-205ENST00000368299 ADAMTSL3P82987 1691 aa22.58■■□□□ 1.21
LMNA-205ENST00000368299 OVOS2A0A0J9YW53 1432 aa22.58■■□□□ 1.21
LMNA-205ENST00000368299 PRKAR2BP31323 418 aa22.58■■□□□ 1.21
LMNA-205ENST00000368299 OVOS2Q6IE36 1432 aa22.58■■□□□ 1.21
LMNA-205ENST00000368299 CENPQQ7L2Z9 268 aaPredicted RBP22.58■■□□□ 1.21
LMNA-205ENST00000368299 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
LMNA-205ENST00000368299 ANKLE2Q86XL3 938 aa22.57■■□□□ 1.2
LMNA-205ENST00000368299 SSH2Q76I76 1423 aa22.57■■□□□ 1.2
LMNA-205ENST00000368299 NUTM2FA1L443 756 aa22.57■■□□□ 1.2
LMNA-205ENST00000368299 ANKARQ7Z5J8 1434 aa22.57■■□□□ 1.2
LMNA-205ENST00000368299 KDM2BQ8NHM5 1336 aa22.56■■□□□ 1.2
LMNA-205ENST00000368299 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
LMNA-205ENST00000368299 MS4A1P11836 297 aa22.55■■□□□ 1.2
LMNA-205ENST00000368299 AAMPQ13685 434 aa22.55■■□□□ 1.2
LMNA-205ENST00000368299 RRS1Q15050 365 aaKnown RBP22.55■■□□□ 1.2
LMNA-205ENST00000368299 KCNA6P17658 529 aa22.54■■□□□ 1.2
LMNA-205ENST00000368299 USP31Q70CQ4 1352 aa22.54■■□□□ 1.2
LMNA-205ENST00000368299 NFE2L2Q16236 605 aa22.54■■□□□ 1.2
LMNA-205ENST00000368299 NALCNQ8IZF0 1738 aa22.53■■□□□ 1.2
LMNA-205ENST00000368299 CALD1Q05682 793 aaKnown RBP22.52■■□□□ 1.2
LMNA-205ENST00000368299 FRAT1Q92837 279 aaPredicted RBP22.52■■□□□ 1.2
LMNA-205ENST00000368299 SETD1BQ9UPS6 1966 aaKnown RBP22.52■■□□□ 1.19
LMNA-205ENST00000368299 HMOX1P09601 288 aa22.51■■□□□ 1.19
LMNA-205ENST00000368299 TSR2Q969E8 191 aaKnown RBP22.51■■□□□ 1.19
LMNA-205ENST00000368299 NGDNQ8NEJ9 315 aaKnown RBP22.51■■□□□ 1.19
LMNA-205ENST00000368299 EXOSC9Q06265 439 aaKnown RBP22.49■■□□□ 1.19
LMNA-205ENST00000368299 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
LMNA-205ENST00000368299 LMOD3Q0VAK6 560 aa22.48■■□□□ 1.19
LMNA-205ENST00000368299 PHACTR3Q96KR7 559 aa22.48■■□□□ 1.19
LMNA-205ENST00000368299 PANK1Q8TE04 598 aa22.47■■□□□ 1.19
LMNA-205ENST00000368299 CHD2O14647 1828 aaKnown RBP22.47■■□□□ 1.19
LMNA-205ENST00000368299 FMN2Q9NZ56 1722 aa22.47■■□□□ 1.19
LMNA-205ENST00000368299 CLUAP1Q96AJ1 413 aa22.47■■□□□ 1.19
LMNA-205ENST00000368299 COG6Q9Y2V7 657 aa22.46■■□□□ 1.19
LMNA-205ENST00000368299 ZKSCAN2Q63HK3 967 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms