RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 STRCP1A6NGW2 1772 aa18.36■□□□□ 0.53
USF1-202ENST00000368020 APAF1O14727 1248 aa18.35■□□□□ 0.53
USF1-202ENST00000368020 PROSER2Q86WR7 435 aaPredicted RBP18.35■□□□□ 0.53
USF1-202ENST00000368020 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
USF1-202ENST00000368020 CDK19Q9BWU1 502 aa18.35■□□□□ 0.53
USF1-202ENST00000368020 IQSEC2Q5JU85 1478 aa18.34■□□□□ 0.53
USF1-202ENST00000368020 ADGRL3Q9HAR2 1447 aa18.33■□□□□ 0.53
USF1-202ENST00000368020 CCDC146Q8IYE0 955 aa18.33■□□□□ 0.52
USF1-202ENST00000368020 FANCIQ9NVI1 1328 aa18.33■□□□□ 0.52
USF1-202ENST00000368020 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
USF1-202ENST00000368020 MTHFSP49914 203 aa18.32■□□□□ 0.52
USF1-202ENST00000368020 ZNF335Q9H4Z2 1342 aaPredicted RBP18.32■□□□□ 0.52
USF1-202ENST00000368020 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
USF1-202ENST00000368020 EXOC6Q8TAG9 804 aa18.31■□□□□ 0.52
USF1-202ENST00000368020 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
USF1-202ENST00000368020 CDC42BPGQ6DT37 1551 aa18.3■□□□□ 0.52
USF1-202ENST00000368020 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
USF1-202ENST00000368020 NALCNQ8IZF0 1738 aa18.29■□□□□ 0.52
USF1-202ENST00000368020 TNNT2P45379 298 aaPredicted RBP18.28■□□□□ 0.52
USF1-202ENST00000368020 LRRC7Q96NW7 1537 aa18.27■□□□□ 0.52
USF1-202ENST00000368020 DCCP43146 1447 aa18.27■□□□□ 0.52
USF1-202ENST00000368020 WDR63Q8IWG1 891 aa18.27■□□□□ 0.52
USF1-202ENST00000368020 WWC1Q8IX03 1113 aa18.27■□□□□ 0.52
USF1-202ENST00000368020 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
USF1-202ENST00000368020 ANKARQ7Z5J8 1434 aa18.27■□□□□ 0.51
USF1-202ENST00000368020 C14orf37Q86TY3 774 aa18.26■□□□□ 0.51
USF1-202ENST00000368020 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
USF1-202ENST00000368020 NUDT16Q96DE0 195 aaKnown RBP18.26■□□□□ 0.51
USF1-202ENST00000368020 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
USF1-202ENST00000368020 FYB1O15117 783 aa18.25■□□□□ 0.51
USF1-202ENST00000368020 RBM33Q96EV2 1170 aaKnown RBP18.25■□□□□ 0.51
USF1-202ENST00000368020 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
USF1-202ENST00000368020 FMN2Q9NZ56 1722 aa18.24■□□□□ 0.51
USF1-202ENST00000368020 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
USF1-202ENST00000368020 XIRP1Q702N8 1843 aaKnown RBP18.24■□□□□ 0.51
USF1-202ENST00000368020 ITSN1Q15811 1721 aa18.24■□□□□ 0.51
USF1-202ENST00000368020 TCP11L2Q8N4U5 519 aa18.23■□□□□ 0.51
USF1-202ENST00000368020 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
USF1-202ENST00000368020 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
USF1-202ENST00000368020 TCERG1O14776 1098 aaKnown RBP18.23■□□□□ 0.51
USF1-202ENST00000368020 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
USF1-202ENST00000368020 MSH6P52701 1360 aa18.22■□□□□ 0.51
USF1-202ENST00000368020 LTBP4Q8N2S1 1624 aa18.22■□□□□ 0.51
USF1-202ENST00000368020 CPSF1Q10570 1443 aaKnown RBP18.22■□□□□ 0.51
USF1-202ENST00000368020 CRBNQ96SW2 442 aa18.22■□□□□ 0.51
USF1-202ENST00000368020 PNPLA6Q8IY17 1366 aa18.22■□□□□ 0.51
USF1-202ENST00000368020 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
USF1-202ENST00000368020 PLIN1O60240 522 aa18.21■□□□□ 0.51
USF1-202ENST00000368020 U2AF1L5P0DN76 240 aaPredicted RBP18.21■□□□□ 0.51
USF1-202ENST00000368020 U2AF1Q01081 240 aaKnown RBP eCLIP18.21■□□□□ 0.51
USF1-202ENST00000368020 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
USF1-202ENST00000368020 GGNBP2Q9H3C7 697 aa18.21■□□□□ 0.51
USF1-202ENST00000368020 PLEKHG3A1L390 1219 aa18.2■□□□□ 0.5
USF1-202ENST00000368020 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
USF1-202ENST00000368020 TOPAZ1Q8N9V7 1692 aa18.2■□□□□ 0.5
USF1-202ENST00000368020 PPIP5K1Q6PFW1 1433 aa18.2■□□□□ 0.5
USF1-202ENST00000368020 MS4A1P11836 297 aa18.2■□□□□ 0.5
USF1-202ENST00000368020 ATF3P18847 181 aa18.2■□□□□ 0.5
USF1-202ENST00000368020 CT47B1P0C2W7 299 aaPredicted RBP18.18■□□□□ 0.5
USF1-202ENST00000368020 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
USF1-202ENST00000368020 AAMPQ13685 434 aa18.18■□□□□ 0.5
USF1-202ENST00000368020 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
USF1-202ENST00000368020 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
USF1-202ENST00000368020 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
USF1-202ENST00000368020 RGPD8O14715 1765 aaPredicted RBP18.17■□□□□ 0.5
USF1-202ENST00000368020 ZNF692Q9BU19 519 aaPredicted RBP18.17■□□□□ 0.5
USF1-202ENST00000368020 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
USF1-202ENST00000368020 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
USF1-202ENST00000368020 CENPQQ7L2Z9 268 aaPredicted RBP18.16■□□□□ 0.5
USF1-202ENST00000368020 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
USF1-202ENST00000368020 MST1RQ04912 1400 aa18.15■□□□□ 0.5
USF1-202ENST00000368020 C1orf167Q5SNV9 1468 aa18.15■□□□□ 0.5
USF1-202ENST00000368020 IL16Q14005 1332 aa18.14■□□□□ 0.5
USF1-202ENST00000368020 CDK12Q9NYV4 1490 aaPredicted RBP18.14■□□□□ 0.49
USF1-202ENST00000368020 NEFMP07197 916 aa18.13■□□□□ 0.49
USF1-202ENST00000368020 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
USF1-202ENST00000368020 NEUROD2Q15784 382 aa18.12■□□□□ 0.49
USF1-202ENST00000368020 C20orf194Q5TEA3 1177 aa18.12■□□□□ 0.49
USF1-202ENST00000368020 PLEKHF1Q96S99 279 aa18.12■□□□□ 0.49
USF1-202ENST00000368020 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
USF1-202ENST00000368020 ACEP12821 1306 aa18.12■□□□□ 0.49
USF1-202ENST00000368020 FCHSD2O94868 740 aa18.12■□□□□ 0.49
USF1-202ENST00000368020 ESCO1Q5FWF5 840 aa18.11■□□□□ 0.49
USF1-202ENST00000368020 KDM2BQ8NHM5 1336 aa18.11■□□□□ 0.49
USF1-202ENST00000368020 CANXP27824 592 aaKnown RBP18.1■□□□□ 0.49
USF1-202ENST00000368020 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
USF1-202ENST00000368020 TMPOP42166 694 aaKnown RBP18.09■□□□□ 0.49
USF1-202ENST00000368020 NRKQ7Z2Y5 1582 aa18.09■□□□□ 0.49
USF1-202ENST00000368020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.09■□□□□ 0.49
USF1-202ENST00000368020 NGDNQ8NEJ9 315 aaKnown RBP18.09■□□□□ 0.49
USF1-202ENST00000368020 SLAIN2Q9P270 581 aa18.09■□□□□ 0.49
USF1-202ENST00000368020 KIF1AQ12756 1690 aa18.09■□□□□ 0.49
USF1-202ENST00000368020 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
USF1-202ENST00000368020 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
USF1-202ENST00000368020 USP6P35125 1406 aa18.08■□□□□ 0.48
USF1-202ENST00000368020 BCAR3O75815 825 aa18.08■□□□□ 0.48
USF1-202ENST00000368020 ANP32AP39687 249 aaKnown RBP18.08■□□□□ 0.48
USF1-202ENST00000368020 RARSP54136 660 aaKnown RBP18.08■□□□□ 0.48
USF1-202ENST00000368020 COG3Q96JB2 828 aa18.08■□□□□ 0.48
USF1-202ENST00000368020 ORAI2Q96SN7 254 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms