RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 PAPPAQ13219 1627 aa12.77□□□□□ -0.36
CNIH4-202ENST00000366857 NPHP4O75161 1426 aaPredicted RBP12.77□□□□□ -0.36
CNIH4-202ENST00000366857 DCCP43146 1447 aa12.77□□□□□ -0.37
CNIH4-202ENST00000366857 WASLO00401 505 aaPredicted RBP12.76□□□□□ -0.37
CNIH4-202ENST00000366857 FYB1O15117 783 aa12.76□□□□□ -0.37
CNIH4-202ENST00000366857 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
CNIH4-202ENST00000366857 PLCH1Q4KWH8 1693 aa12.75□□□□□ -0.37
CNIH4-202ENST00000366857 PXDNQ92626 1479 aa12.75□□□□□ -0.37
CNIH4-202ENST00000366857 CDK19Q9BWU1 502 aa12.74□□□□□ -0.37
CNIH4-202ENST00000366857 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
CNIH4-202ENST00000366857 UBR2Q8IWV8 1755 aa12.72□□□□□ -0.37
CNIH4-202ENST00000366857 SCN11AQ9UI33 1791 aa12.72□□□□□ -0.37
CNIH4-202ENST00000366857 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
CNIH4-202ENST00000366857 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
CNIH4-202ENST00000366857 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.37
CNIH4-202ENST00000366857 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.38
CNIH4-202ENST00000366857 MRS2Q9HD23 443 aa12.7□□□□□ -0.38
CNIH4-202ENST00000366857 ADAMTS8Q9UP79 889 aa12.7□□□□□ -0.38
CNIH4-202ENST00000366857 CCDC27Q2M243 656 aa12.69□□□□□ -0.38
CNIH4-202ENST00000366857 COL16A1Q07092 1604 aaPredicted RBP12.68□□□□□ -0.38
CNIH4-202ENST00000366857 CACNA1FO60840 1977 aa12.68□□□□□ -0.38
CNIH4-202ENST00000366857 MLECQ14165 292 aa12.68□□□□□ -0.38
CNIH4-202ENST00000366857 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
CNIH4-202ENST00000366857 CICQ96RK0 1608 aaPredicted RBP12.68□□□□□ -0.38
CNIH4-202ENST00000366857 KDRP35968 1356 aa12.68□□□□□ -0.38
CNIH4-202ENST00000366857 CGNL1Q0VF96 1302 aa12.68□□□□□ -0.38
CNIH4-202ENST00000366857 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.67□□□□□ -0.38
CNIH4-202ENST00000366857 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
CNIH4-202ENST00000366857 THEMISQ8N1K5 641 aaPredicted RBP12.66□□□□□ -0.38
CNIH4-202ENST00000366857 DMRT2Q9Y5R5 561 aa12.66□□□□□ -0.38
CNIH4-202ENST00000366857 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
CNIH4-202ENST00000366857 CC2D1BQ5T0F9 858 aaKnown RBP12.65□□□□□ -0.38
CNIH4-202ENST00000366857 DUSP27Q5VZP5 1158 aa12.65□□□□□ -0.38
CNIH4-202ENST00000366857 KIF24Q5T7B8 1368 aa12.65□□□□□ -0.38
CNIH4-202ENST00000366857 YTHDC1Q96MU7 727 aaKnown RBP12.64□□□□□ -0.39
CNIH4-202ENST00000366857 TXNDC2Q86VQ3 553 aa12.63□□□□□ -0.39
CNIH4-202ENST00000366857 CABP1Q9NZU7 370 aa12.63□□□□□ -0.39
CNIH4-202ENST00000366857 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
CNIH4-202ENST00000366857 AHDC1Q5TGY3 1603 aaPredicted RBP12.63□□□□□ -0.39
CNIH4-202ENST00000366857 TOGARAM1Q9Y4F4 1720 aa12.63□□□□□ -0.39
CNIH4-202ENST00000366857 NUDT16Q96DE0 195 aaKnown RBP12.63□□□□□ -0.39
CNIH4-202ENST00000366857 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
CNIH4-202ENST00000366857 AMOTL2Q9Y2J4 779 aa12.63□□□□□ -0.39
CNIH4-202ENST00000366857 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
CNIH4-202ENST00000366857 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
CNIH4-202ENST00000366857 C5P01031 1676 aa12.62□□□□□ -0.39
CNIH4-202ENST00000366857 KNSTRNQ9Y448 316 aa12.62□□□□□ -0.39
CNIH4-202ENST00000366857 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
CNIH4-202ENST00000366857 PDE3BQ13370 1112 aa12.62□□□□□ -0.39
CNIH4-202ENST00000366857 KCNA6P17658 529 aa12.62□□□□□ -0.39
CNIH4-202ENST00000366857 IL13P35225 146 aa12.61□□□□□ -0.39
CNIH4-202ENST00000366857 HDGFP51858 240 aaKnown RBP12.6□□□□□ -0.39
CNIH4-202ENST00000366857 ERICH6BQ5W0A0 696 aa12.6□□□□□ -0.39
CNIH4-202ENST00000366857 LAMB4A4D0S4 1761 aa12.6□□□□□ -0.39
CNIH4-202ENST00000366857 SLFN5Q08AF3 891 aa12.6□□□□□ -0.39
CNIH4-202ENST00000366857 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
CNIH4-202ENST00000366857 USP19O94966 1318 aa12.6□□□□□ -0.39
CNIH4-202ENST00000366857 MRC1P22897 1456 aa12.59□□□□□ -0.39
CNIH4-202ENST00000366857 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
CNIH4-202ENST00000366857 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
CNIH4-202ENST00000366857 PHLPP1O60346 1717 aa12.59□□□□□ -0.39
CNIH4-202ENST00000366857 TTC21BQ7Z4L5 1316 aa12.58□□□□□ -0.4
CNIH4-202ENST00000366857 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
CNIH4-202ENST00000366857 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
CNIH4-202ENST00000366857 RREB1Q92766 1687 aa12.57□□□□□ -0.4
CNIH4-202ENST00000366857 ACEP12821 1306 aa12.57□□□□□ -0.4
CNIH4-202ENST00000366857 NGEFQ8N5V2 710 aa12.57□□□□□ -0.4
CNIH4-202ENST00000366857 TTC21AQ8NDW8 1320 aa12.57□□□□□ -0.4
CNIH4-202ENST00000366857 STK26Q9P289 416 aa12.57□□□□□ -0.4
CNIH4-202ENST00000366857 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
CNIH4-202ENST00000366857 CRB1P82279 1406 aa12.56□□□□□ -0.4
CNIH4-202ENST00000366857 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
CNIH4-202ENST00000366857 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
CNIH4-202ENST00000366857 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
CNIH4-202ENST00000366857 NUP188Q5SRE5 1749 aa12.55□□□□□ -0.4
CNIH4-202ENST00000366857 MTHFSP49914 203 aa12.55□□□□□ -0.4
CNIH4-202ENST00000366857 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
CNIH4-202ENST00000366857 ROBO1Q9Y6N7 1651 aa12.55□□□□□ -0.4
CNIH4-202ENST00000366857 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
CNIH4-202ENST00000366857 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
CNIH4-202ENST00000366857 TMC1Q8TDI8 760 aa12.54□□□□□ -0.4
CNIH4-202ENST00000366857 SLC26A8Q96RN1 970 aa12.54□□□□□ -0.4
CNIH4-202ENST00000366857 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
CNIH4-202ENST00000366857 ARHGEF10O15013 1369 aa12.54□□□□□ -0.4
CNIH4-202ENST00000366857 RGS12O14924 1447 aa12.53□□□□□ -0.4
CNIH4-202ENST00000366857 CASZ1Q86V15 1759 aa12.53□□□□□ -0.4
CNIH4-202ENST00000366857 WWC1Q8IX03 1113 aa12.53□□□□□ -0.4
CNIH4-202ENST00000366857 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
CNIH4-202ENST00000366857 NME9Q86XW9 330 aa12.52□□□□□ -0.41
CNIH4-202ENST00000366857 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
CNIH4-202ENST00000366857 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
CNIH4-202ENST00000366857 MSH6P52701 1360 aa12.51□□□□□ -0.41
CNIH4-202ENST00000366857 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
CNIH4-202ENST00000366857 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
CNIH4-202ENST00000366857 ANKLE2Q86XL3 938 aa12.51□□□□□ -0.41
CNIH4-202ENST00000366857 IL16Q14005 1332 aa12.5□□□□□ -0.41
CNIH4-202ENST00000366857 EID1Q9Y6B2 187 aa12.5□□□□□ -0.41
CNIH4-202ENST00000366857 ITGB4P16144 1822 aa12.5□□□□□ -0.41
CNIH4-202ENST00000366857 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
CNIH4-202ENST00000366857 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms