RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 PLEKHG3A1L390 1219 aa7.54□□□□□ -1.2
RNU1-43P-201ENST00000365052 SEPT12Q8IYM1 358 aa7.54□□□□□ -1.2
RNU1-43P-201ENST00000365052 CARD11Q9BXL7 1154 aa7.54□□□□□ -1.2
RNU1-43P-201ENST00000365052 STRN4Q9NRL3 753 aa7.54□□□□□ -1.2
RNU1-43P-201ENST00000365052 KIAA1210Q9ULL0 1709 aa7.54□□□□□ -1.2
RNU1-43P-201ENST00000365052 ROCK2O75116 1388 aaKnown RBP7.54□□□□□ -1.2
RNU1-43P-201ENST00000365052 CDK12Q9NYV4 1490 aaPredicted RBP7.54□□□□□ -1.2
RNU1-43P-201ENST00000365052 SLIT2O94813 1529 aa7.53□□□□□ -1.2
RNU1-43P-201ENST00000365052 VPS72Q15906 364 aa7.53□□□□□ -1.2
RNU1-43P-201ENST00000365052 FAM98CQ17RN3 349 aaKnown RBP7.53□□□□□ -1.2
RNU1-43P-201ENST00000365052 FAM182BQ5T319 152 aa7.53□□□□□ -1.2
RNU1-43P-201ENST00000365052 PCGF6Q9BYE7 350 aa7.53□□□□□ -1.2
RNU1-43P-201ENST00000365052 PRDM11Q9NQV5 511 aa7.53□□□□□ -1.2
RNU1-43P-201ENST00000365052 TONSLQ96HA7 1378 aa7.53□□□□□ -1.2
RNU1-43P-201ENST00000365052 ATP7BP35670 1465 aa7.53□□□□□ -1.2
RNU1-43P-201ENST00000365052 EVC2Q86UK5 1308 aa7.52□□□□□ -1.2
RNU1-43P-201ENST00000365052 PPIP5K1Q6PFW1 1433 aa7.52□□□□□ -1.2
RNU1-43P-201ENST00000365052 TRPM3Q9HCF6 1732 aaPredicted RBP7.52□□□□□ -1.2
RNU1-43P-201ENST00000365052 RALGAPBQ86X10 1494 aa7.52□□□□□ -1.21
RNU1-43P-201ENST00000365052 EVA1CP58658 441 aa7.52□□□□□ -1.21
RNU1-43P-201ENST00000365052 USP35Q9P2H5 1018 aa7.52□□□□□ -1.21
RNU1-43P-201ENST00000365052 ALS2Q96Q42 1657 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 ATAD2Q6PL18 1390 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 KIAA0232Q92628 1395 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 SOX12O15370 315 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 GCP02774 474 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 NLRP6P59044 892 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 NLRP13Q86W25 1043 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 TRPM1Q7Z4N2 1603 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 QRICH2Q9H0J4 1663 aa7.51□□□□□ -1.21
RNU1-43P-201ENST00000365052 GLI3P10071 1580 aa7.5□□□□□ -1.21
RNU1-43P-201ENST00000365052 ITSN1Q15811 1721 aa7.5□□□□□ -1.21
RNU1-43P-201ENST00000365052 POLR3AO14802 1390 aaPredicted RBP7.5□□□□□ -1.21
RNU1-43P-201ENST00000365052 KRT27Q7Z3Y8 459 aa7.5□□□□□ -1.21
RNU1-43P-201ENST00000365052 TMC1Q8TDI8 760 aa7.5□□□□□ -1.21
RNU1-43P-201ENST00000365052 PLCH1Q4KWH8 1693 aa7.5□□□□□ -1.21
RNU1-43P-201ENST00000365052 BRWD3Q6RI45 1802 aa7.5□□□□□ -1.21
RNU1-43P-201ENST00000365052 ABCA3Q99758 1704 aa7.49□□□□□ -1.21
RNU1-43P-201ENST00000365052 ONECUT3O60422 494 aaPredicted RBP7.49□□□□□ -1.21
RNU1-43P-201ENST00000365052 DEFB132Q7Z7B7 95 aa7.49□□□□□ -1.21
RNU1-43P-201ENST00000365052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.49□□□□□ -1.21
RNU1-43P-201ENST00000365052 ZNF692Q9BU19 519 aaPredicted RBP7.49□□□□□ -1.21
RNU1-43P-201ENST00000365052 ZRANB1Q9UGI0 708 aa7.49□□□□□ -1.21
RNU1-43P-201ENST00000365052 SPATA31A5Q5VU36 1347 aa7.49□□□□□ -1.21
RNU1-43P-201ENST00000365052 SPATA31A7Q8IWB4 1347 aa7.49□□□□□ -1.21
RNU1-43P-201ENST00000365052 SF3B2Q13435 895 aaKnown RBP7.48□□□□□ -1.21
RNU1-43P-201ENST00000365052 LARP1Q6PKG0 1096 aaKnown RBP7.48□□□□□ -1.21
RNU1-43P-201ENST00000365052 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.48□□□□□ -1.21
RNU1-43P-201ENST00000365052 SLC12A5Q9H2X9 1139 aa7.48□□□□□ -1.21
RNU1-43P-201ENST00000365052 TTC21BQ7Z4L5 1316 aa7.48□□□□□ -1.21
RNU1-43P-201ENST00000365052 NWD2Q9ULI1 1742 aa7.47□□□□□ -1.21
RNU1-43P-201ENST00000365052 COL14A1Q05707 1796 aaKnown RBP7.47□□□□□ -1.21
RNU1-43P-201ENST00000365052 ST20-MTHFSA0A0A6YYL1 179 aa7.47□□□□□ -1.21
RNU1-43P-201ENST00000365052 CCDC125Q86Z20 511 aa7.47□□□□□ -1.21
RNU1-43P-201ENST00000365052 TOPAZ1Q8N9V7 1692 aa7.47□□□□□ -1.21
RNU1-43P-201ENST00000365052 SPATA31A1Q5TZJ5 1347 aa7.47□□□□□ -1.21
RNU1-43P-201ENST00000365052 KTN1Q86UP2 1357 aaKnown RBP7.46□□□□□ -1.21
RNU1-43P-201ENST00000365052 USP6P35125 1406 aa7.46□□□□□ -1.21
RNU1-43P-201ENST00000365052 CRYBG1Q9Y4K1 1723 aa7.46□□□□□ -1.22
RNU1-43P-201ENST00000365052 PHRF1Q9P1Y6 1649 aaKnown RBP7.45□□□□□ -1.22
RNU1-43P-201ENST00000365052 NRAPQ86VF7 1730 aa7.45□□□□□ -1.22
RNU1-43P-201ENST00000365052 PDE3BQ13370 1112 aa7.45□□□□□ -1.22
RNU1-43P-201ENST00000365052 HDGFL2Q7Z4V5 671 aaPredicted RBP7.45□□□□□ -1.22
RNU1-43P-201ENST00000365052 NME9Q86XW9 330 aa7.45□□□□□ -1.22
RNU1-43P-201ENST00000365052 AXIN2Q9Y2T1 843 aa7.45□□□□□ -1.22
RNU1-43P-201ENST00000365052 USP19O94966 1318 aa7.45□□□□□ -1.22
RNU1-43P-201ENST00000365052 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
RNU1-43P-201ENST00000365052 TRIM37O94972 964 aa7.44□□□□□ -1.22
RNU1-43P-201ENST00000365052 CSB-PGBD3P0DP91 1061 aa7.44□□□□□ -1.22
RNU1-43P-201ENST00000365052 EN1Q05925 392 aaPredicted RBP7.44□□□□□ -1.22
RNU1-43P-201ENST00000365052 TOM1L2Q6ZVM7 507 aa7.44□□□□□ -1.22
RNU1-43P-201ENST00000365052 TCP11L2Q8N4U5 519 aa7.44□□□□□ -1.22
RNU1-43P-201ENST00000365052 FBLN1P23142 703 aa7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 BAG6P46379 1132 aa7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 ARHGEF25Q86VW2 580 aa7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 KCNH5Q8NCM2 988 aa7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 CCER1Q8TC90 406 aaPredicted RBP7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 TESK2Q96S53 571 aa7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 TTC21AQ8NDW8 1320 aa7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 BRD4O60885 1362 aaPredicted RBP7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 BLMP54132 1417 aaPredicted RBP7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 SSH2Q76I76 1423 aa7.43□□□□□ -1.22
RNU1-43P-201ENST00000365052 PSDA5PKW4 1024 aaPredicted RBP7.42□□□□□ -1.22
RNU1-43P-201ENST00000365052 APBA3O96018 575 aa7.42□□□□□ -1.22
RNU1-43P-201ENST00000365052 EZH2Q15910 746 aaKnown RBP7.42□□□□□ -1.22
RNU1-43P-201ENST00000365052 POLR3GLQ9BT43 218 aa7.42□□□□□ -1.22
RNU1-43P-201ENST00000365052 TERF2IPQ9NYB0 399 aa7.42□□□□□ -1.22
RNU1-43P-201ENST00000365052 CPDO75976 1380 aa7.42□□□□□ -1.22
RNU1-43P-201ENST00000365052 CPSF1Q10570 1443 aaKnown RBP7.42□□□□□ -1.22
RNU1-43P-201ENST00000365052 NRKQ7Z2Y5 1582 aa7.42□□□□□ -1.22
RNU1-43P-201ENST00000365052 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
RNU1-43P-201ENST00000365052 RGPD5Q99666 1765 aa7.41□□□□□ -1.22
RNU1-43P-201ENST00000365052 TMF1P82094 1093 aa7.41□□□□□ -1.22
RNU1-43P-201ENST00000365052 FAM196AQ6ZSG2 479 aa7.41□□□□□ -1.22
RNU1-43P-201ENST00000365052 BARGINQ6ZT62 677 aa7.41□□□□□ -1.22
RNU1-43P-201ENST00000365052 LTV1Q96GA3 475 aaPredicted RBP7.41□□□□□ -1.22
RNU1-43P-201ENST00000365052 THRAP3Q9Y2W1 955 aaKnown RBP7.41□□□□□ -1.22
RNU1-43P-201ENST00000365052 PIK3C2AO00443 1686 aa7.41□□□□□ -1.22
RNU1-43P-201ENST00000365052 EP400Q96L91 3159 aa7.4□□□□□ -1.22
RNU1-43P-201ENST00000365052 DDB1Q16531 1140 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms