RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 UNC13BO14795 1591 aa2.23□□□□□ -2.05
RNU1-42P-201ENST00000364033 GPRASP1Q5JY77 1395 aa2.23□□□□□ -2.05
RNU1-42P-201ENST00000364033 KIAA0232Q92628 1395 aa2.23□□□□□ -2.05
RNU1-42P-201ENST00000364033 NEXMIFQ5QGS0 1516 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 SPATA31A1Q5TZJ5 1347 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 PXDNQ92626 1479 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 NRXN3Q9Y4C0 1643 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 KCNQ2O43526 872 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 ZBTB7AO95365 584 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 GCP02774 474 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 NLRP6P59044 892 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 C1QTNF8P60827 252 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 NBPF14Q5TI25 921 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 FAM196AQ6ZSG2 479 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 TOM1L2Q6ZVM7 507 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 PELP1Q8IZL8 1130 aaKnown RBP2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 KLHL34Q8N239 644 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 TMC1Q8TDI8 760 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 LTV1Q96GA3 475 aaPredicted RBP2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 BCL11BQ9C0K0 894 aaPredicted RBP2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 WWC3Q9ULE0 1092 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 CCDC61Q9Y6R9 512 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 DCCP43146 1447 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 BLMP54132 1417 aaPredicted RBP2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 RRBP1Q9P2E9 1410 aaKnown RBP2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 ANKRD30BQ9BXX2 1392 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 RAB3GAP2Q9H2M9 1393 aa2.22□□□□□ -2.05
RNU1-42P-201ENST00000364033 MYOM2P54296 1465 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 CDK12Q9NYV4 1490 aaPredicted RBP2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 IQGAP3Q86VI3 1631 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 EXOC5O00471 708 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 MSH5O43196 834 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 PRELPP51888 382 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 SPATA31E1Q6ZUB1 1445 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 SMIM5Q71RC9 77 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 NLRP13Q86W25 1043 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 PROM2Q8N271 834 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 TCP11L2Q8N4U5 519 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 MARCH10Q8NA82 808 aaPredicted RBP2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 DDX54Q8TDD1 881 aaKnown RBP2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 L3MBTL2Q969R5 705 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 NLRP2Q9NX02 1062 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 SHPRHQ149N8 1683 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 SLIT2O94813 1529 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 SBNO1A3KN83 1393 aa2.21□□□□□ -2.06
RNU1-42P-201ENST00000364033 NALCNQ8IZF0 1738 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 XRN1Q8IZH2 1706 aaKnown RBP2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 GLI3P10071 1580 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 TECPR2O15040 1411 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 TNS3Q68CZ2 1445 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 PLEKHG3A1L390 1219 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 DCAF8L1A6NGE4 600 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 DDB1Q16531 1140 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 NME9Q86XW9 330 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 SYTL4Q96C24 671 aaPredicted RBP2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 SLC12A5Q9H2X9 1139 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 SPON1Q9HCB6 807 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 ANO8Q9HCE9 1232 aaPredicted RBP2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 ARHGEF10O15013 1369 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 SPHKAPQ2M3C7 1700 aa2.2□□□□□ -2.06
RNU1-42P-201ENST00000364033 PIK3C2GO75747 1445 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 PRIM1P49642 420 aaKnown RBP2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 CNGB1Q14028 1251 aaPredicted RBP2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 GPR162Q16538 588 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 TXNRD1Q16881 649 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 MSL1Q68DK7 614 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 BARGINQ6ZT62 677 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 ARHGEF25Q86VW2 580 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 USHBP1Q8N6Y0 703 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 ANKRD24Q8TF21 1146 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 ZNF526Q8TF50 670 aaPredicted RBP2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 SYT17Q9BSW7 474 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 POLR3GLQ9BT43 218 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 FHDC1Q9C0D6 1143 aaPredicted RBP2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 LRRC4BQ9NT99 713 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 STK32BQ9NY57 414 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 NHSL1Q5SYE7 1610 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 NRXN1Q9ULB1 1477 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 KIF1BO60333 1816 aa2.19□□□□□ -2.06
RNU1-42P-201ENST00000364033 TTC21BQ7Z4L5 1316 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 CENPJQ9HC77 1338 aaPredicted RBP2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 RGPD8O14715 1765 aaPredicted RBP2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 SSH2Q76I76 1423 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 PPM1GO15355 546 aaPredicted RBP2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 PTGER2P43116 358 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 SLC15A2Q16348 729 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 ZNF827Q17R98 1081 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 ZNF784Q8NCA9 323 aaPredicted RBP2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 NLGN2Q8NFZ4 835 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 ARXQ96QS3 562 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 ZNF692Q9BU19 519 aaPredicted RBP2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 CARD10Q9BWT7 1032 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 CARD11Q9BXL7 1154 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 THRAP3Q9Y2W1 955 aaKnown RBP2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 BRWD3Q6RI45 1802 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 CAMTA1Q9Y6Y1 1673 aa2.18□□□□□ -2.06
RNU1-42P-201ENST00000364033 EVC2Q86UK5 1308 aa2.17□□□□□ -2.06
RNU1-42P-201ENST00000364033 PPIP5K1Q6PFW1 1433 aa2.17□□□□□ -2.06
RNU1-42P-201ENST00000364033 ANKARQ7Z5J8 1434 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms