RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 ROBO1Q9Y6N7 1651 aa14.77□□□□□ -0.04
SNX6-201ENST00000362031 KRT28Q7Z3Y7 464 aa14.76□□□□□ -0.05
SNX6-201ENST00000362031 GGNBP2Q9H3C7 697 aa14.76□□□□□ -0.05
SNX6-201ENST00000362031 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
SNX6-201ENST00000362031 EDC4Q6P2E9 1401 aaKnown RBP14.76□□□□□ -0.05
SNX6-201ENST00000362031 TOM1O60784 492 aa14.76□□□□□ -0.05
SNX6-201ENST00000362031 KIF1AQ12756 1690 aa14.76□□□□□ -0.05
SNX6-201ENST00000362031 NUTM2GQ5VZR2 741 aa14.75□□□□□ -0.05
SNX6-201ENST00000362031 PXDNQ92626 1479 aa14.75□□□□□ -0.05
SNX6-201ENST00000362031 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
SNX6-201ENST00000362031 FBLN1P23142 703 aa14.74□□□□□ -0.05
SNX6-201ENST00000362031 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
SNX6-201ENST00000362031 TRPM3Q9HCF6 1732 aaPredicted RBP14.73□□□□□ -0.05
SNX6-201ENST00000362031 MIER1Q8N108 512 aa14.73□□□□□ -0.05
SNX6-201ENST00000362031 CGNL1Q0VF96 1302 aa14.73□□□□□ -0.05
SNX6-201ENST00000362031 NPHP3Q7Z494 1330 aa14.73□□□□□ -0.05
SNX6-201ENST00000362031 SOS2Q07890 1332 aaPredicted RBP14.72□□□□□ -0.05
SNX6-201ENST00000362031 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
SNX6-201ENST00000362031 PIK3C2AO00443 1686 aa14.72□□□□□ -0.05
SNX6-201ENST00000362031 NHSL1Q5SYE7 1610 aa14.72□□□□□ -0.05
SNX6-201ENST00000362031 PLEKHG5O94827 1062 aa14.71□□□□□ -0.05
SNX6-201ENST00000362031 TNNT2P45379 298 aaPredicted RBP14.7□□□□□ -0.06
SNX6-201ENST00000362031 ABTB2Q8N961 1025 aa14.7□□□□□ -0.06
SNX6-201ENST00000362031 NPC1L1Q9UHC9 1359 aa14.7□□□□□ -0.06
SNX6-201ENST00000362031 MARF1Q9Y4F3 1742 aaKnown RBP14.69□□□□□ -0.06
SNX6-201ENST00000362031 KIF20BQ96Q89 1820 aa14.69□□□□□ -0.06
SNX6-201ENST00000362031 PARD3Q8TEW0 1356 aa14.69□□□□□ -0.06
SNX6-201ENST00000362031 LMOD2Q6P5Q4 547 aa14.69□□□□□ -0.06
SNX6-201ENST00000362031 SPATA31A3Q5VYP0 1347 aa14.69□□□□□ -0.06
SNX6-201ENST00000362031 TTC21AQ8NDW8 1320 aa14.69□□□□□ -0.06
SNX6-201ENST00000362031 NLRP6P59044 892 aa14.68□□□□□ -0.06
SNX6-201ENST00000362031 OVOS2A0A0J9YW53 1432 aa14.68□□□□□ -0.06
SNX6-201ENST00000362031 OVOS2Q6IE36 1432 aa14.68□□□□□ -0.06
SNX6-201ENST00000362031 ALS2Q96Q42 1657 aa14.68□□□□□ -0.06
SNX6-201ENST00000362031 AHDC1Q5TGY3 1603 aaPredicted RBP14.68□□□□□ -0.06
SNX6-201ENST00000362031 CCDC184Q52MB2 194 aa14.68□□□□□ -0.06
SNX6-201ENST00000362031 SBNO1A3KN83 1393 aa14.67□□□□□ -0.06
SNX6-201ENST00000362031 ANP32CO43423 234 aa14.67□□□□□ -0.06
SNX6-201ENST00000362031 MORC1Q86VD1 984 aa14.67□□□□□ -0.06
SNX6-201ENST00000362031 CABLES1Q8TDN4 633 aa14.67□□□□□ -0.06
SNX6-201ENST00000362031 SOX12O15370 315 aa14.66□□□□□ -0.06
SNX6-201ENST00000362031 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
SNX6-201ENST00000362031 USP31Q70CQ4 1352 aa14.66□□□□□ -0.06
SNX6-201ENST00000362031 BRD4O60885 1362 aaPredicted RBP14.65□□□□□ -0.06
SNX6-201ENST00000362031 COG3Q96JB2 828 aa14.65□□□□□ -0.06
SNX6-201ENST00000362031 NSD2O96028 1365 aa14.65□□□□□ -0.06
SNX6-201ENST00000362031 COL16A1Q07092 1604 aaPredicted RBP14.65□□□□□ -0.06
SNX6-201ENST00000362031 MED1Q15648 1581 aaPredicted RBP14.64□□□□□ -0.07
SNX6-201ENST00000362031 PHLPP1O60346 1717 aa14.64□□□□□ -0.07
SNX6-201ENST00000362031 ANKRD26Q9UPS8 1709 aa14.64□□□□□ -0.07
SNX6-201ENST00000362031 PPP2R1AP30153 589 aa14.64□□□□□ -0.07
SNX6-201ENST00000362031 RALBP1Q15311 655 aa14.63□□□□□ -0.07
SNX6-201ENST00000362031 HSPA1LP34931 641 aa14.63□□□□□ -0.07
SNX6-201ENST00000362031 RRS1Q15050 365 aaKnown RBP14.63□□□□□ -0.07
SNX6-201ENST00000362031 USP19O94966 1318 aa14.62□□□□□ -0.07
SNX6-201ENST00000362031 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
SNX6-201ENST00000362031 LRRC59Q96AG4 307 aaKnown RBP14.61□□□□□ -0.07
SNX6-201ENST00000362031 EMILIN1Q9Y6C2 1016 aa14.61□□□□□ -0.07
SNX6-201ENST00000362031 USP54Q70EL1 1684 aa14.61□□□□□ -0.07
SNX6-201ENST00000362031 GCP02774 474 aa14.61□□□□□ -0.07
SNX6-201ENST00000362031 POLKQ9UBT6 870 aa14.61□□□□□ -0.07
SNX6-201ENST00000362031 MYBBP1AQ9BQG0 1328 aaKnown RBP14.6□□□□□ -0.07
SNX6-201ENST00000362031 ARHGEF10O15013 1369 aa14.6□□□□□ -0.07
SNX6-201ENST00000362031 PNPLA6Q8IY17 1366 aa14.6□□□□□ -0.07
SNX6-201ENST00000362031 CRYBG1Q9Y4K1 1723 aa14.59□□□□□ -0.07
SNX6-201ENST00000362031 NFAT5O94916 1531 aa14.59□□□□□ -0.07
SNX6-201ENST00000362031 MTHFSP49914 203 aa14.59□□□□□ -0.07
SNX6-201ENST00000362031 SLIT3O75094 1523 aa14.59□□□□□ -0.07
SNX6-201ENST00000362031 MAP2P11137 1827 aaKnown RBP14.59□□□□□ -0.07
SNX6-201ENST00000362031 MAP3K19Q56UN5 1328 aa14.58□□□□□ -0.08
SNX6-201ENST00000362031 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.08
SNX6-201ENST00000362031 PEAK1Q9H792 1746 aa14.57□□□□□ -0.08
SNX6-201ENST00000362031 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
SNX6-201ENST00000362031 AATKQ6ZMQ8 1374 aa14.57□□□□□ -0.08
SNX6-201ENST00000362031 PHRF1Q9P1Y6 1649 aaKnown RBP14.56□□□□□ -0.08
SNX6-201ENST00000362031 ABCA3Q99758 1704 aa14.55□□□□□ -0.08
SNX6-201ENST00000362031 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
SNX6-201ENST00000362031 ARHGEF25Q86VW2 580 aa14.54□□□□□ -0.08
SNX6-201ENST00000362031 AXIN2Q9Y2T1 843 aa14.54□□□□□ -0.08
SNX6-201ENST00000362031 COL22A1Q8NFW1 1626 aaPredicted RBP14.54□□□□□ -0.08
SNX6-201ENST00000362031 CHRNA2Q15822 529 aa14.54□□□□□ -0.08
SNX6-201ENST00000362031 HSP90AB2PQ58FF8 381 aa14.54□□□□□ -0.08
SNX6-201ENST00000362031 KCNH5Q8NCM2 988 aa14.54□□□□□ -0.08
SNX6-201ENST00000362031 KIAA0232Q92628 1395 aa14.53□□□□□ -0.08
SNX6-201ENST00000362031 SMG6Q86US8 1419 aaKnown RBP14.53□□□□□ -0.08
SNX6-201ENST00000362031 LTN1O94822 1766 aa14.53□□□□□ -0.08
SNX6-201ENST00000362031 MRS2Q9HD23 443 aa14.53□□□□□ -0.08
SNX6-201ENST00000362031 NUTM2BA6NNL0 878 aaPredicted RBP14.52□□□□□ -0.09
SNX6-201ENST00000362031 NUTM2EB1AL46 878 aaPredicted RBP14.52□□□□□ -0.09
SNX6-201ENST00000362031 NUTM2AQ8IVF1 878 aaPredicted RBP14.52□□□□□ -0.09
SNX6-201ENST00000362031 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.09
SNX6-201ENST00000362031 JCADQ9P266 1359 aa14.51□□□□□ -0.09
SNX6-201ENST00000362031 FAM83GA6ND36 823 aa14.51□□□□□ -0.09
SNX6-201ENST00000362031 CCER2I3L3R5 266 aa14.51□□□□□ -0.09
SNX6-201ENST00000362031 HOXC9P31274 260 aa14.51□□□□□ -0.09
SNX6-201ENST00000362031 FBXO41Q8TF61 875 aa14.51□□□□□ -0.09
SNX6-201ENST00000362031 SHPRHQ149N8 1683 aa14.5□□□□□ -0.09
SNX6-201ENST00000362031 ADAMTS2O95450 1211 aa14.5□□□□□ -0.09
SNX6-201ENST00000362031 AMPHP49418 695 aa14.5□□□□□ -0.09
SNX6-201ENST00000362031 COL18A1P39060 1754 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms