RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 CCDC27Q2M243 656 aa16.72■□□□□ 0.27
SGMS1-202ENST00000361781 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
SGMS1-202ENST00000361781 ASXL1Q8IXJ9 1541 aa16.72■□□□□ 0.27
SGMS1-202ENST00000361781 SYCE3A1L190 88 aa16.71■□□□□ 0.27
SGMS1-202ENST00000361781 RBM27Q9P2N5 1060 aaKnown RBP16.71■□□□□ 0.27
SGMS1-202ENST00000361781 CCDC173Q0VFZ6 552 aa16.71■□□□□ 0.27
SGMS1-202ENST00000361781 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
SGMS1-202ENST00000361781 EIF2S2P20042 333 aaKnown RBP16.7■□□□□ 0.26
SGMS1-202ENST00000361781 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
SGMS1-202ENST00000361781 ARHGEF12Q9NZN5 1544 aa16.7■□□□□ 0.26
SGMS1-202ENST00000361781 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
SGMS1-202ENST00000361781 RABEP1Q15276 862 aa16.7■□□□□ 0.26
SGMS1-202ENST00000361781 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
SGMS1-202ENST00000361781 CCDC9Q9Y3X0 531 aaKnown RBP16.7■□□□□ 0.26
SGMS1-202ENST00000361781 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
SGMS1-202ENST00000361781 C16orf71Q8IYS4 520 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-202ENST00000361781 GDPD2Q9HCC8 539 aa16.69■□□□□ 0.26
SGMS1-202ENST00000361781 RAPGEF3O95398 923 aa16.69■□□□□ 0.26
SGMS1-202ENST00000361781 MAP4K4O95819 1239 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-202ENST00000361781 CLCN1P35523 988 aa16.69■□□□□ 0.26
SGMS1-202ENST00000361781 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
SGMS1-202ENST00000361781 AMPHP49418 695 aa16.68■□□□□ 0.26
SGMS1-202ENST00000361781 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
SGMS1-202ENST00000361781 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
SGMS1-202ENST00000361781 EXOC6BQ9Y2D4 811 aa16.68■□□□□ 0.26
SGMS1-202ENST00000361781 EMILIN1Q9Y6C2 1016 aa16.68■□□□□ 0.26
SGMS1-202ENST00000361781 KIAA0556O60303 1618 aa16.68■□□□□ 0.26
SGMS1-202ENST00000361781 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
SGMS1-202ENST00000361781 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
SGMS1-202ENST00000361781 VPS37CA5D8V6 355 aaPredicted RBP16.67■□□□□ 0.26
SGMS1-202ENST00000361781 BAG4O95429 457 aaKnown RBP16.67■□□□□ 0.26
SGMS1-202ENST00000361781 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
SGMS1-202ENST00000361781 ZSCAN30Q86W11 494 aa16.67■□□□□ 0.26
SGMS1-202ENST00000361781 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
SGMS1-202ENST00000361781 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
SGMS1-202ENST00000361781 ZMYND15Q9H091 742 aa16.67■□□□□ 0.26
SGMS1-202ENST00000361781 USP19O94966 1318 aa16.66■□□□□ 0.26
SGMS1-202ENST00000361781 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
SGMS1-202ENST00000361781 TSPYL4Q9UJ04 414 aa16.66■□□□□ 0.26
SGMS1-202ENST00000361781 RRP9O43818 475 aaKnown RBP16.66■□□□□ 0.26
SGMS1-202ENST00000361781 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
SGMS1-202ENST00000361781 NOS1P29475 1434 aa16.66■□□□□ 0.26
SGMS1-202ENST00000361781 NUTM2GQ5VZR2 741 aa16.66■□□□□ 0.26
SGMS1-202ENST00000361781 CT47B1P0C2W7 299 aaPredicted RBP16.65■□□□□ 0.26
SGMS1-202ENST00000361781 FIBPO43427 364 aa16.65■□□□□ 0.26
SGMS1-202ENST00000361781 MCM10Q7L590 875 aa16.65■□□□□ 0.26
SGMS1-202ENST00000361781 F6X3S4 739 aa16.64■□□□□ 0.25
SGMS1-202ENST00000361781 NUCB1Q02818 461 aa16.64■□□□□ 0.25
SGMS1-202ENST00000361781 NGDNQ8NEJ9 315 aaKnown RBP16.64■□□□□ 0.25
SGMS1-202ENST00000361781 UQCRHLA0A096LP55 91 aa16.63■□□□□ 0.25
SGMS1-202ENST00000361781 UQCRHP07919 91 aa16.63■□□□□ 0.25
SGMS1-202ENST00000361781 HDAC1Q13547 482 aaPredicted RBP16.63■□□□□ 0.25
SGMS1-202ENST00000361781 IL1RAPL2Q9NP60 686 aa16.63■□□□□ 0.25
SGMS1-202ENST00000361781 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
SGMS1-202ENST00000361781 BMP2KLQ5H9B9 411 aa16.63■□□□□ 0.25
SGMS1-202ENST00000361781 TPM2P07951 284 aa16.63■□□□□ 0.25
SGMS1-202ENST00000361781 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
SGMS1-202ENST00000361781 PHF14O94880 888 aa16.62■□□□□ 0.25
SGMS1-202ENST00000361781 TXNDC2Q86VQ3 553 aa16.62■□□□□ 0.25
SGMS1-202ENST00000361781 DDX54Q8TDD1 881 aaKnown RBP16.62■□□□□ 0.25
SGMS1-202ENST00000361781 PRDM10Q9NQV6 1147 aa16.62■□□□□ 0.25
SGMS1-202ENST00000361781 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
SGMS1-202ENST00000361781 FCHSD2O94868 740 aa16.62■□□□□ 0.25
SGMS1-202ENST00000361781 NFE2L2Q16236 605 aa16.62■□□□□ 0.25
SGMS1-202ENST00000361781 KRT24Q2M2I5 525 aa16.62■□□□□ 0.25
SGMS1-202ENST00000361781 MBD5Q9P267 1494 aa16.62■□□□□ 0.25
SGMS1-202ENST00000361781 SPC24Q8NBT2 197 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 DTNBO60941 627 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 GAS2L3Q86XJ1 694 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 TRMT2AQ8IZ69 625 aaKnown RBP16.61■□□□□ 0.25
SGMS1-202ENST00000361781 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 ISY1Q9ULR0 285 aaKnown RBP16.61■□□□□ 0.25
SGMS1-202ENST00000361781 SMC5Q8IY18 1101 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 TRAPPC8Q9Y2L5 1435 aa16.61■□□□□ 0.25
SGMS1-202ENST00000361781 ITSN2Q9NZM3 1697 aa16.6■□□□□ 0.25
SGMS1-202ENST00000361781 ERC2O15083 957 aa16.6■□□□□ 0.25
SGMS1-202ENST00000361781 FOSBP53539 338 aa16.6■□□□□ 0.25
SGMS1-202ENST00000361781 NME9Q86XW9 330 aa16.6■□□□□ 0.25
SGMS1-202ENST00000361781 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
SGMS1-202ENST00000361781 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
SGMS1-202ENST00000361781 ANTXR1Q9H6X2 564 aa16.6■□□□□ 0.25
SGMS1-202ENST00000361781 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
SGMS1-202ENST00000361781 FYB1O15117 783 aa16.6■□□□□ 0.25
SGMS1-202ENST00000361781 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
SGMS1-202ENST00000361781 SURF6O75683 361 aaKnown RBP16.59■□□□□ 0.25
SGMS1-202ENST00000361781 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.25
SGMS1-202ENST00000361781 MBIPQ9NS73 344 aa16.58■□□□□ 0.25
SGMS1-202ENST00000361781 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.25
SGMS1-202ENST00000361781 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
SGMS1-202ENST00000361781 IDI1Q13907 227 aa16.58■□□□□ 0.24
SGMS1-202ENST00000361781 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
SGMS1-202ENST00000361781 CCDC39Q9UFE4 941 aa16.58■□□□□ 0.24
SGMS1-202ENST00000361781 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
SGMS1-202ENST00000361781 C14orf93Q9H972 538 aaKnown RBP16.57■□□□□ 0.24
SGMS1-202ENST00000361781 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
SGMS1-202ENST00000361781 HSP90B1P14625 803 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms