RNA–Protein interactions for RNA: ENST00000361283.2

CHAMP1-201, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAMP1, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-201ENST00000361283 SSH2Q76I76 1423 aa15.18■□□□□ 0.02
CHAMP1-201ENST00000361283 TNNT2P45379 298 aaPredicted RBP15.18■□□□□ 0.02
CHAMP1-201ENST00000361283 USP6P35125 1406 aa15.17■□□□□ 0.02
CHAMP1-201ENST00000361283 USP54Q70EL1 1684 aa15.15■□□□□ 0.02
CHAMP1-201ENST00000361283 CDK12Q9NYV4 1490 aaPredicted RBP15.15■□□□□ 0.02
CHAMP1-201ENST00000361283 RUNDC1Q96C34 613 aa15.14■□□□□ 0.01
CHAMP1-201ENST00000361283 RGPD8O14715 1765 aaPredicted RBP15.14■□□□□ 0.01
CHAMP1-201ENST00000361283 ACEP12821 1306 aa15.14■□□□□ 0.01
CHAMP1-201ENST00000361283 NCKAP5LQ9HCH0 1330 aa15.14■□□□□ 0.01
CHAMP1-201ENST00000361283 MAP2P11137 1827 aaKnown RBP15.14■□□□□ 0.01
CHAMP1-201ENST00000361283 LRRC7Q96NW7 1537 aa15.14■□□□□ 0.01
CHAMP1-201ENST00000361283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHAMP1-201ENST00000361283 OVOS2A0A0J9YW53 1432 aa15.13■□□□□ 0.01
CHAMP1-201ENST00000361283 OVOS2Q6IE36 1432 aa15.13■□□□□ 0.01
CHAMP1-201ENST00000361283 ADGRL3Q9HAR2 1447 aa15.13■□□□□ 0.01
CHAMP1-201ENST00000361283 TTC21AQ8NDW8 1320 aa15.13■□□□□ 0.01
CHAMP1-201ENST00000361283 TTC21BQ7Z4L5 1316 aa15.12■□□□□ 0.01
CHAMP1-201ENST00000361283 APAF1O14727 1248 aa15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 NME9Q86XW9 330 aa15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 CCDC146Q8IYE0 955 aa15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 COG3Q96JB2 828 aa15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 CCDC27Q2M243 656 aa15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 POLKQ9UBT6 870 aa15.11■□□□□ 0.01
CHAMP1-201ENST00000361283 USP31Q70CQ4 1352 aa15.1■□□□□ 0.01
CHAMP1-201ENST00000361283 CDCA7LQ96GN5 454 aa15.1■□□□□ 0.01
CHAMP1-201ENST00000361283 SALL2Q9Y467 1007 aaPredicted RBP15.1■□□□□ 0.01
CHAMP1-201ENST00000361283 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
CHAMP1-201ENST00000361283 RCAN3Q9UKA8 241 aa15.09■□□□□ 0.01
CHAMP1-201ENST00000361283 DIAPH1O60610 1272 aaKnown RBP15.09■□□□□ 0.01
CHAMP1-201ENST00000361283 SLFN5Q08AF3 891 aa15.09■□□□□ 0.01
CHAMP1-201ENST00000361283 DUSP27Q5VZP5 1158 aa15.08■□□□□ 0.01
CHAMP1-201ENST00000361283 PNNQ9H307 717 aaKnown RBP15.08■□□□□ 0.01
CHAMP1-201ENST00000361283 PIK3C2AO00443 1686 aa15.08■□□□□ 0
CHAMP1-201ENST00000361283 U2AF1L5P0DN76 240 aaPredicted RBP15.07■□□□□ 0
CHAMP1-201ENST00000361283 U2AF1Q01081 240 aaKnown RBP eCLIP15.07■□□□□ 0
CHAMP1-201ENST00000361283 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
CHAMP1-201ENST00000361283 E9PSI1 815 aa15.07■□□□□ 0
CHAMP1-201ENST00000361283 TCP11L2Q8N4U5 519 aa15.06■□□□□ 0
CHAMP1-201ENST00000361283 WWC1Q8IX03 1113 aa15.06■□□□□ 0
CHAMP1-201ENST00000361283 NCOA3Q9Y6Q9 1424 aa15.06■□□□□ 0
CHAMP1-201ENST00000361283 MARF1Q9Y4F3 1742 aaKnown RBP15.05■□□□□ 0
CHAMP1-201ENST00000361283 WDR63Q8IWG1 891 aa15.05■□□□□ -0
CHAMP1-201ENST00000361283 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
CHAMP1-201ENST00000361283 RRP1P56182 461 aaKnown RBP15.05■□□□□ -0
CHAMP1-201ENST00000361283 PPP4R2Q9NY27 417 aa15.05■□□□□ -0
CHAMP1-201ENST00000361283 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
CHAMP1-201ENST00000361283 FCHSD2O94868 740 aa15.04■□□□□ -0
CHAMP1-201ENST00000361283 NUTM2FA1L443 756 aa15.03■□□□□ -0
CHAMP1-201ENST00000361283 NGDNQ8NEJ9 315 aaKnown RBP15.03■□□□□ -0
CHAMP1-201ENST00000361283 IL13P35225 146 aa15.03■□□□□ -0
CHAMP1-201ENST00000361283 PEAK1Q9H792 1746 aa15.02■□□□□ -0
CHAMP1-201ENST00000361283 EMILIN1Q9Y6C2 1016 aa15.02□□□□□ -0.01
CHAMP1-201ENST00000361283 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
CHAMP1-201ENST00000361283 U2SURPO15042 1029 aaKnown RBP15.02□□□□□ -0.01
CHAMP1-201ENST00000361283 PMFBP1Q8TBY8 1022 aa15.02□□□□□ -0.01
CHAMP1-201ENST00000361283 RGPD1P0DJD0 1748 aa15.02□□□□□ -0.01
CHAMP1-201ENST00000361283 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
CHAMP1-201ENST00000361283 KIF24Q5T7B8 1368 aa15.01□□□□□ -0.01
CHAMP1-201ENST00000361283 DCCP43146 1447 aa15.01□□□□□ -0.01
CHAMP1-201ENST00000361283 LMTK3Q96Q04 1460 aa15□□□□□ -0.01
CHAMP1-201ENST00000361283 STRCP1A6NGW2 1772 aa15□□□□□ -0.01
CHAMP1-201ENST00000361283 RSPH6AQ9H0K4 717 aa15□□□□□ -0.01
CHAMP1-201ENST00000361283 PHF8Q9UPP1 1060 aa15□□□□□ -0.01
CHAMP1-201ENST00000361283 MAPK8IP3Q9UPT6 1336 aa15□□□□□ -0.01
CHAMP1-201ENST00000361283 SPINK5Q9NQ38 1064 aaPredicted RBP14.99□□□□□ -0.01
CHAMP1-201ENST00000361283 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
CHAMP1-201ENST00000361283 IL16Q14005 1332 aa14.98□□□□□ -0.01
CHAMP1-201ENST00000361283 KDM4FA0A1W2PPD8 638 aa14.98□□□□□ -0.01
CHAMP1-201ENST00000361283 FBLN1P23142 703 aa14.98□□□□□ -0.01
CHAMP1-201ENST00000361283 SBNO1A3KN83 1393 aa14.97□□□□□ -0.01
CHAMP1-201ENST00000361283 DMRT2Q9Y5R5 561 aa14.97□□□□□ -0.01
CHAMP1-201ENST00000361283 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
CHAMP1-201ENST00000361283 RRS1Q15050 365 aaKnown RBP14.97□□□□□ -0.01
CHAMP1-201ENST00000361283 STRCQ7RTU9 1775 aa14.97□□□□□ -0.01
CHAMP1-201ENST00000361283 PHRF1Q9P1Y6 1649 aaKnown RBP14.96□□□□□ -0.01
CHAMP1-201ENST00000361283 MST1RQ04912 1400 aa14.96□□□□□ -0.01
CHAMP1-201ENST00000361283 FLT4P35916 1363 aa14.96□□□□□ -0.01
CHAMP1-201ENST00000361283 PROSER2Q86WR7 435 aaPredicted RBP14.96□□□□□ -0.02
CHAMP1-201ENST00000361283 RRP7AQ9Y3A4 280 aaKnown RBP14.96□□□□□ -0.02
CHAMP1-201ENST00000361283 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
CHAMP1-201ENST00000361283 C19orf44Q9H6X5 657 aa14.95□□□□□ -0.02
CHAMP1-201ENST00000361283 MYH16Q9H6N6 1097 aa14.95□□□□□ -0.02
CHAMP1-201ENST00000361283 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
CHAMP1-201ENST00000361283 C1orf167Q5SNV9 1468 aa14.95□□□□□ -0.02
CHAMP1-201ENST00000361283 NEFMP07197 916 aa14.94□□□□□ -0.02
CHAMP1-201ENST00000361283 RTL1A6NKG5 1358 aa14.94□□□□□ -0.02
CHAMP1-201ENST00000361283 PRKAR2BP31323 418 aa14.94□□□□□ -0.02
CHAMP1-201ENST00000361283 ARHGEF10O15013 1369 aa14.94□□□□□ -0.02
CHAMP1-201ENST00000361283 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.93□□□□□ -0.02
CHAMP1-201ENST00000361283 MAP3K19Q56UN5 1328 aa14.93□□□□□ -0.02
CHAMP1-201ENST00000361283 NFAT5O94916 1531 aa14.93□□□□□ -0.02
CHAMP1-201ENST00000361283 CT47B1P0C2W7 299 aaPredicted RBP14.93□□□□□ -0.02
CHAMP1-201ENST00000361283 EIF4A2Q14240 407 aaKnown RBP14.93□□□□□ -0.02
CHAMP1-201ENST00000361283 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
CHAMP1-201ENST00000361283 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
CHAMP1-201ENST00000361283 NFE2L2Q16236 605 aa14.92□□□□□ -0.02
CHAMP1-201ENST00000361283 NLRP6P59044 892 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms