RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 C14orf93Q9H972 538 aaKnown RBP19.92■□□□□ 0.78
SCAF1-201ENST00000360565 PER1O15534 1290 aaPredicted RBP19.91■□□□□ 0.78
SCAF1-201ENST00000360565 MRE11P49959 708 aa19.91■□□□□ 0.78
SCAF1-201ENST00000360565 AIMP1Q12904 312 aaKnown RBP19.91■□□□□ 0.78
SCAF1-201ENST00000360565 HSP90AB4PQ58FF6 505 aa19.91■□□□□ 0.78
SCAF1-201ENST00000360565 NUDT16Q96DE0 195 aaKnown RBP19.9■□□□□ 0.78
SCAF1-201ENST00000360565 PZPP20742 1482 aa19.9■□□□□ 0.78
SCAF1-201ENST00000360565 H3BQV1 296 aa19.9■□□□□ 0.78
SCAF1-201ENST00000360565 IFFO2Q5TF58 517 aa19.9■□□□□ 0.78
SCAF1-201ENST00000360565 KIF3AQ9Y496 699 aa19.9■□□□□ 0.78
SCAF1-201ENST00000360565 IGHDP01880 384 aa19.89■□□□□ 0.78
SCAF1-201ENST00000360565 FBXO31Q5XUX0 539 aaPredicted RBP19.89■□□□□ 0.78
SCAF1-201ENST00000360565 RABEP1Q15276 862 aa19.89■□□□□ 0.77
SCAF1-201ENST00000360565 FAM184AQ8NB25 1140 aa19.89■□□□□ 0.77
SCAF1-201ENST00000360565 GNAI2P04899 355 aa19.89■□□□□ 0.77
SCAF1-201ENST00000360565 DCTN1Q14203 1278 aa19.89■□□□□ 0.77
SCAF1-201ENST00000360565 FANCAO15360 1455 aa19.88■□□□□ 0.77
SCAF1-201ENST00000360565 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
SCAF1-201ENST00000360565 VPS37CA5D8V6 355 aaPredicted RBP19.88■□□□□ 0.77
SCAF1-201ENST00000360565 GPRASP1Q5JY77 1395 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 FAM135AQ9P2D6 1515 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 TRIM27P14373 513 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 SF3A1Q15459 793 aaKnown RBP19.87■□□□□ 0.77
SCAF1-201ENST00000360565 SMC3Q9UQE7 1217 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 RAPGEF4Q8WZA2 1011 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 ERC2O15083 957 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 HDGFL1Q5TGJ6 251 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 EMILIN1Q9Y6C2 1016 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 SYCP2Q9BX26 1530 aa19.87■□□□□ 0.77
SCAF1-201ENST00000360565 NME9Q86XW9 330 aa19.86■□□□□ 0.77
SCAF1-201ENST00000360565 CLASRPQ8N2M8 674 aaKnown RBP19.85■□□□□ 0.77
SCAF1-201ENST00000360565 NLRP2Q9NX02 1062 aa19.85■□□□□ 0.77
SCAF1-201ENST00000360565 PLCH2O75038 1416 aa19.85■□□□□ 0.77
SCAF1-201ENST00000360565 MCM4P33991 863 aa19.85■□□□□ 0.77
SCAF1-201ENST00000360565 TOMM22Q9NS69 142 aa19.85■□□□□ 0.77
SCAF1-201ENST00000360565 ITSN2Q9NZM3 1697 aa19.85■□□□□ 0.77
SCAF1-201ENST00000360565 RIC3Q7Z5B4 369 aa19.85■□□□□ 0.77
SCAF1-201ENST00000360565 CAVIN1Q6NZI2 390 aaKnown RBP19.84■□□□□ 0.77
SCAF1-201ENST00000360565 RNF20Q5VTR2 975 aa19.83■□□□□ 0.77
SCAF1-201ENST00000360565 ABCC11Q96J66 1382 aa19.83■□□□□ 0.77
SCAF1-201ENST00000360565 K7ELQ4 463 aaPredicted RBP19.83■□□□□ 0.77
SCAF1-201ENST00000360565 NASPP49321 788 aaPredicted RBP19.83■□□□□ 0.77
SCAF1-201ENST00000360565 CCT4P50991 539 aaKnown RBP19.83■□□□□ 0.77
SCAF1-201ENST00000360565 MIS18AQ9NYP9 233 aa19.83■□□□□ 0.76
SCAF1-201ENST00000360565 TEX14Q8IWB6 1497 aa19.83■□□□□ 0.76
SCAF1-201ENST00000360565 MCM10Q7L590 875 aa19.83■□□□□ 0.76
SCAF1-201ENST00000360565 HSP90AA2PQ14568 343 aaPredicted RBP19.82■□□□□ 0.76
SCAF1-201ENST00000360565 TULP1O00294 542 aaPredicted RBP19.82■□□□□ 0.76
SCAF1-201ENST00000360565 ESCO1Q5FWF5 840 aa19.82■□□□□ 0.76
SCAF1-201ENST00000360565 RNF214Q8ND24 703 aa19.82■□□□□ 0.76
SCAF1-201ENST00000360565 TRAPPC8Q9Y2L5 1435 aa19.81■□□□□ 0.76
SCAF1-201ENST00000360565 FBLN1P23142 703 aa19.81■□□□□ 0.76
SCAF1-201ENST00000360565 NUP160Q12769 1436 aa19.81■□□□□ 0.76
SCAF1-201ENST00000360565 DISP1Q96F81 1524 aa19.81■□□□□ 0.76
SCAF1-201ENST00000360565 PRPF40AO75400 957 aaKnown RBP19.81■□□□□ 0.76
SCAF1-201ENST00000360565 ALDH1L2Q3SY69 923 aa19.81■□□□□ 0.76
SCAF1-201ENST00000360565 KDM5BQ9UGL1 1544 aa19.81■□□□□ 0.76
SCAF1-201ENST00000360565 PLEKHH1Q9ULM0 1364 aa19.81■□□□□ 0.76
SCAF1-201ENST00000360565 RPAP2Q8IXW5 612 aaPredicted RBP19.8■□□□□ 0.76
SCAF1-201ENST00000360565 CNTROBQ8N137 903 aa19.8■□□□□ 0.76
SCAF1-201ENST00000360565 FAM43AQ8N2R8 423 aa19.8■□□□□ 0.76
SCAF1-201ENST00000360565 LRRCC1Q9C099 1032 aa19.8■□□□□ 0.76
SCAF1-201ENST00000360565 PCDHB15Q9Y5E8 787 aa19.8■□□□□ 0.76
SCAF1-201ENST00000360565 DUOX2Q9NRD8 1548 aa19.79■□□□□ 0.76
SCAF1-201ENST00000360565 TPM4P67936 248 aa19.79■□□□□ 0.76
SCAF1-201ENST00000360565 DNMT1P26358 1616 aaKnown RBP19.79■□□□□ 0.76
SCAF1-201ENST00000360565 ASXL1Q8IXJ9 1541 aa19.78■□□□□ 0.76
SCAF1-201ENST00000360565 CARD14Q9BXL6 1004 aa19.78■□□□□ 0.76
SCAF1-201ENST00000360565 TBC1D2Q9BYX2 928 aa19.78■□□□□ 0.76
SCAF1-201ENST00000360565 IFT57Q9NWB7 429 aa19.78■□□□□ 0.76
SCAF1-201ENST00000360565 THEMISQ8N1K5 641 aaPredicted RBP19.78■□□□□ 0.76
SCAF1-201ENST00000360565 MAGI3Q5TCQ9 1506 aa19.78■□□□□ 0.76
SCAF1-201ENST00000360565 BECN2A8MW95 431 aa19.78■□□□□ 0.76
SCAF1-201ENST00000360565 EVA1CP58658 441 aa19.78■□□□□ 0.76
SCAF1-201ENST00000360565 PLEKHO1Q53GL0 409 aaPredicted RBP19.78■□□□□ 0.76
SCAF1-201ENST00000360565 ARHGEF12Q9NZN5 1544 aa19.77■□□□□ 0.76
SCAF1-201ENST00000360565 SRCIN1Q9C0H9 1055 aa19.77■□□□□ 0.76
SCAF1-201ENST00000360565 EXOC6BQ9Y2D4 811 aa19.77■□□□□ 0.76
SCAF1-201ENST00000360565 GOLGA6L19H0YKK7 550 aa19.77■□□□□ 0.76
SCAF1-201ENST00000360565 ISY1Q9ULR0 285 aaKnown RBP19.77■□□□□ 0.76
SCAF1-201ENST00000360565 MCM2P49736 904 aa19.77■□□□□ 0.75
SCAF1-201ENST00000360565 BICD2Q8TD16 824 aa19.77■□□□□ 0.75
SCAF1-201ENST00000360565 NEUROD6Q96NK8 337 aa19.76■□□□□ 0.75
SCAF1-201ENST00000360565 ZNF530Q6P9A1 599 aaPredicted RBP19.75■□□□□ 0.75
SCAF1-201ENST00000360565 IL1RAPL2Q9NP60 686 aa19.75■□□□□ 0.75
SCAF1-201ENST00000360565 WASLO00401 505 aaPredicted RBP19.75■□□□□ 0.75
SCAF1-201ENST00000360565 FSD1Q9BTV5 496 aa19.75■□□□□ 0.75
SCAF1-201ENST00000360565 UHRF1BP1Q6BDS2 1440 aa19.75■□□□□ 0.75
SCAF1-201ENST00000360565 SHANK2Q9UPX8 1470 aa19.75■□□□□ 0.75
SCAF1-201ENST00000360565 FYB1O15117 783 aa19.75■□□□□ 0.75
SCAF1-201ENST00000360565 CIZ1Q9ULV3 898 aaPredicted RBP19.75■□□□□ 0.75
SCAF1-201ENST00000360565 NSD2O96028 1365 aa19.74■□□□□ 0.75
SCAF1-201ENST00000360565 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
SCAF1-201ENST00000360565 GTF2E1P29083 439 aaPredicted RBP19.74■□□□□ 0.75
SCAF1-201ENST00000360565 SAMD9Q5K651 1589 aa19.74■□□□□ 0.75
SCAF1-201ENST00000360565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.74■□□□□ 0.75
SCAF1-201ENST00000360565 CCDC27Q2M243 656 aa19.74■□□□□ 0.75
SCAF1-201ENST00000360565 TNNQ9UQP3 1299 aa19.74■□□□□ 0.75
SCAF1-201ENST00000360565 LRRFIP1Q32MZ4 808 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms