RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 TMEM131LA2VDJ0 1609 aa28.59■■■□□ 2.17
CCSER2-202ENST00000359979 SRPK2P78362 688 aaKnown RBP28.59■■■□□ 2.17
CCSER2-202ENST00000359979 DZIP1LQ8IYY4 767 aaKnown RBP28.58■■■□□ 2.17
CCSER2-202ENST00000359979 TMPOP42166 694 aaKnown RBP28.58■■■□□ 2.17
CCSER2-202ENST00000359979 UPF2Q9HAU5 1272 aaKnown RBP28.57■■■□□ 2.16
CCSER2-202ENST00000359979 FTSJ3Q8IY81 847 aaKnown RBP28.57■■■□□ 2.16
CCSER2-202ENST00000359979 PREX1Q8TCU6 1659 aa28.56■■■□□ 2.16
CCSER2-202ENST00000359979 CD163L1Q9NR16 1453 aa28.55■■■□□ 2.16
CCSER2-202ENST00000359979 SAFB2Q14151 953 aaKnown RBP eCLIP28.55■■■□□ 2.16
CCSER2-202ENST00000359979 GGNBP2Q9H3C7 697 aa28.55■■■□□ 2.16
CCSER2-202ENST00000359979 TRIM35Q9UPQ4 493 aa28.55■■■□□ 2.16
CCSER2-202ENST00000359979 YTHDC2Q9H6S0 1430 aaKnown RBP28.54■■■□□ 2.16
CCSER2-202ENST00000359979 U2SURPO15042 1029 aaKnown RBP28.54■■■□□ 2.16
CCSER2-202ENST00000359979 FYB1O15117 783 aa28.54■■■□□ 2.16
CCSER2-202ENST00000359979 FRAT2O75474 233 aaPredicted RBP28.54■■■□□ 2.16
CCSER2-202ENST00000359979 PNNQ9H307 717 aaKnown RBP28.54■■■□□ 2.16
CCSER2-202ENST00000359979 STK26Q9P289 416 aa28.54■■■□□ 2.16
CCSER2-202ENST00000359979 TBC1D32Q96NH3 1257 aa28.52■■■□□ 2.16
CCSER2-202ENST00000359979 PNPLA6Q8IY17 1366 aa28.52■■■□□ 2.16
CCSER2-202ENST00000359979 EXOSC9Q06265 439 aaKnown RBP28.52■■■□□ 2.16
CCSER2-202ENST00000359979 TSR2Q969E8 191 aaKnown RBP28.52■■■□□ 2.16
CCSER2-202ENST00000359979 SMC4Q9NTJ3 1288 aa28.52■■■□□ 2.16
CCSER2-202ENST00000359979 MYO5BQ9ULV0 1848 aa28.52■■■□□ 2.16
CCSER2-202ENST00000359979 HDAC1Q13547 482 aaPredicted RBP28.5■■■□□ 2.15
CCSER2-202ENST00000359979 PRAM1Q96QH2 718 aa28.5■■■□□ 2.15
CCSER2-202ENST00000359979 DDX19BQ9UMR2 479 aa28.5■■■□□ 2.15
CCSER2-202ENST00000359979 YEATS2Q9ULM3 1422 aa28.5■■■□□ 2.15
CCSER2-202ENST00000359979 HDGFL2Q7Z4V5 671 aaPredicted RBP28.49■■■□□ 2.15
CCSER2-202ENST00000359979 TRIM27P14373 513 aa28.48■■■□□ 2.15
CCSER2-202ENST00000359979 POGKQ9P215 609 aa28.48■■■□□ 2.15
CCSER2-202ENST00000359979 MINK1Q8N4C8 1332 aaPredicted RBP28.48■■■□□ 2.15
CCSER2-202ENST00000359979 ATF7IPQ6VMQ6 1270 aa28.47■■■□□ 2.15
CCSER2-202ENST00000359979 IL27Q8NEV9 243 aa28.47■■■□□ 2.15
CCSER2-202ENST00000359979 CDC42BPGQ6DT37 1551 aa28.47■■■□□ 2.15
CCSER2-202ENST00000359979 DIAPH1O60610 1272 aaKnown RBP28.47■■■□□ 2.15
CCSER2-202ENST00000359979 SSH1Q8WYL5 1049 aa28.47■■■□□ 2.15
CCSER2-202ENST00000359979 ARHGEF40Q8TER5 1519 aa28.46■■■□□ 2.15
CCSER2-202ENST00000359979 ALKQ9UM73 1620 aa28.45■■■□□ 2.14
CCSER2-202ENST00000359979 RIPK4P57078 832 aa28.44■■■□□ 2.14
CCSER2-202ENST00000359979 KIF20BQ96Q89 1820 aa28.43■■■□□ 2.14
CCSER2-202ENST00000359979 KIF16BQ96L93 1317 aa28.43■■■□□ 2.14
CCSER2-202ENST00000359979 FCHSD2O94868 740 aa28.41■■■□□ 2.14
CCSER2-202ENST00000359979 IPO8O15397 1037 aaKnown RBP28.41■■■□□ 2.14
CCSER2-202ENST00000359979 ALDH1L2Q3SY69 923 aa28.41■■■□□ 2.14
CCSER2-202ENST00000359979 CDK19Q9BWU1 502 aa28.41■■■□□ 2.14
CCSER2-202ENST00000359979 ANTXR1Q9H6X2 564 aa28.41■■■□□ 2.14
CCSER2-202ENST00000359979 ITPRIPQ8IWB1 547 aa28.4■■■□□ 2.14
CCSER2-202ENST00000359979 NOB1Q9ULX3 412 aaKnown RBP28.4■■■□□ 2.14
CCSER2-202ENST00000359979 DLC1Q96QB1 1528 aa28.39■■■□□ 2.14
CCSER2-202ENST00000359979 SMC5Q8IY18 1101 aa28.39■■■□□ 2.13
CCSER2-202ENST00000359979 ZNF428Q96B54 188 aa28.38■■■□□ 2.13
CCSER2-202ENST00000359979 ATP7BP35670 1465 aa28.37■■■□□ 2.13
CCSER2-202ENST00000359979 TBC1D2Q9BYX2 928 aa28.36■■■□□ 2.13
CCSER2-202ENST00000359979 ZBTB40Q9NUA8 1239 aa28.36■■■□□ 2.13
CCSER2-202ENST00000359979 PPIP5K1Q6PFW1 1433 aa28.36■■■□□ 2.13
CCSER2-202ENST00000359979 BRPF1P55201 1214 aaPredicted RBP28.36■■■□□ 2.13
CCSER2-202ENST00000359979 CABP1Q9NZU7 370 aa28.36■■■□□ 2.13
CCSER2-202ENST00000359979 LRRC7Q96NW7 1537 aa28.35■■■□□ 2.13
CCSER2-202ENST00000359979 FAM135BQ49AJ0 1406 aa28.35■■■□□ 2.13
CCSER2-202ENST00000359979 TMEM57Q8N5G2 664 aa28.34■■■□□ 2.13
CCSER2-202ENST00000359979 SLKQ9H2G2 1235 aaPredicted RBP28.33■■■□□ 2.13
CCSER2-202ENST00000359979 RSPH6AQ9H0K4 717 aa28.32■■■□□ 2.12
CCSER2-202ENST00000359979 BRPF3Q9ULD4 1205 aa28.31■■■□□ 2.12
CCSER2-202ENST00000359979 PPP6R1Q9UPN7 881 aa28.31■■■□□ 2.12
CCSER2-202ENST00000359979 FBXO31Q5XUX0 539 aaPredicted RBP28.31■■■□□ 2.12
CCSER2-202ENST00000359979 C22orf23Q9BZE7 217 aa28.3■■■□□ 2.12
CCSER2-202ENST00000359979 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
CCSER2-202ENST00000359979 POLKQ9UBT6 870 aa28.29■■■□□ 2.12
CCSER2-202ENST00000359979 REREQ9P2R6 1566 aa28.28■■■□□ 2.12
CCSER2-202ENST00000359979 CALD1Q05682 793 aaKnown RBP28.28■■■□□ 2.12
CCSER2-202ENST00000359979 STAG3Q9UJ98 1225 aa28.28■■■□□ 2.12
CCSER2-202ENST00000359979 PRKAR2BP31323 418 aa28.27■■■□□ 2.12
CCSER2-202ENST00000359979 CHMP4BQ9H444 224 aaKnown RBP28.27■■■□□ 2.12
CCSER2-202ENST00000359979 NUCB1Q02818 461 aa28.26■■■□□ 2.11
CCSER2-202ENST00000359979 AGLP35573 1532 aa28.26■■■□□ 2.11
CCSER2-202ENST00000359979 NFE2L2Q16236 605 aa28.25■■■□□ 2.11
CCSER2-202ENST00000359979 ARHGAP45Q92619 1136 aa28.25■■■□□ 2.11
CCSER2-202ENST00000359979 A2ML1A8K2U0 1454 aa28.25■■■□□ 2.11
CCSER2-202ENST00000359979 SETD1AO15047 1707 aaKnown RBP28.24■■■□□ 2.11
CCSER2-202ENST00000359979 MFAP1P55081 439 aaKnown RBP28.23■■■□□ 2.11
CCSER2-202ENST00000359979 PIK3R4Q99570 1358 aa28.23■■■□□ 2.11
CCSER2-202ENST00000359979 SPATA31D1Q6ZQQ2 1576 aa28.22■■■□□ 2.11
CCSER2-202ENST00000359979 EDC4Q6P2E9 1401 aaKnown RBP28.22■■■□□ 2.11
CCSER2-202ENST00000359979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.22■■■□□ 2.11
CCSER2-202ENST00000359979 CPSF1Q10570 1443 aaKnown RBP28.21■■■□□ 2.11
CCSER2-202ENST00000359979 RTN4Q9NQC3 1192 aaKnown RBP28.21■■■□□ 2.11
CCSER2-202ENST00000359979 PTCH1Q13635 1447 aa28.2■■■□□ 2.11
CCSER2-202ENST00000359979 CDK12Q9NYV4 1490 aaPredicted RBP28.2■■■□□ 2.11
CCSER2-202ENST00000359979 RIMS2Q9UQ26 1411 aa28.2■■■□□ 2.1
CCSER2-202ENST00000359979 IFT57Q9NWB7 429 aa28.2■■■□□ 2.1
CCSER2-202ENST00000359979 AATKQ6ZMQ8 1374 aa28.19■■■□□ 2.1
CCSER2-202ENST00000359979 VAMP4O75379 141 aa28.19■■■□□ 2.1
CCSER2-202ENST00000359979 GNAI1P63096 354 aa28.19■■■□□ 2.1
CCSER2-202ENST00000359979 CHD1LQ86WJ1 897 aa28.19■■■□□ 2.1
CCSER2-202ENST00000359979 WAPLQ7Z5K2 1190 aa28.17■■■□□ 2.1
CCSER2-202ENST00000359979 MRPL50Q8N5N7 158 aaKnown RBP28.17■■■□□ 2.1
CCSER2-202ENST00000359979 IL13P35225 146 aa28.17■■■□□ 2.1
CCSER2-202ENST00000359979 RBM25P49756 843 aaKnown RBP28.17■■■□□ 2.1
CCSER2-202ENST00000359979 GCC1Q96CN9 775 aa28.17■■■□□ 2.1
CCSER2-202ENST00000359979 CHMP5Q9NZZ3 219 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms