RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 NGDNQ8NEJ9 315 aaKnown RBP27.67■■■□□ 2.02
FAM3A-202ENST00000359889 CHD2O14647 1828 aaKnown RBP27.66■■■□□ 2.02
FAM3A-202ENST00000359889 USP6P35125 1406 aa27.66■■■□□ 2.02
FAM3A-202ENST00000359889 AKAP12Q02952 1782 aa27.66■■■□□ 2.02
FAM3A-202ENST00000359889 AATKQ6ZMQ8 1374 aa27.65■■■□□ 2.02
FAM3A-202ENST00000359889 DIAPH1O60610 1272 aaKnown RBP27.64■■■□□ 2.02
FAM3A-202ENST00000359889 GOLGA2Q08379 1002 aa27.64■■■□□ 2.02
FAM3A-202ENST00000359889 SHPRHQ149N8 1683 aa27.64■■■□□ 2.01
FAM3A-202ENST00000359889 TTC21AQ8NDW8 1320 aa27.63■■■□□ 2.01
FAM3A-202ENST00000359889 PNNQ9H307 717 aaKnown RBP27.63■■■□□ 2.01
FAM3A-202ENST00000359889 PNPLA6Q8IY17 1366 aa27.63■■■□□ 2.01
FAM3A-202ENST00000359889 PMFBP1Q8TBY8 1022 aa27.62■■■□□ 2.01
FAM3A-202ENST00000359889 CDCA7LQ96GN5 454 aa27.62■■■□□ 2.01
FAM3A-202ENST00000359889 POLKQ9UBT6 870 aa27.62■■■□□ 2.01
FAM3A-202ENST00000359889 NKTRP30414 1462 aaKnown RBP27.62■■■□□ 2.01
FAM3A-202ENST00000359889 U2SURPO15042 1029 aaKnown RBP27.61■■■□□ 2.01
FAM3A-202ENST00000359889 ZNF521Q96K83 1311 aa27.61■■■□□ 2.01
FAM3A-202ENST00000359889 C14orf37Q86TY3 774 aa27.61■■■□□ 2.01
FAM3A-202ENST00000359889 PELP1Q8IZL8 1130 aaKnown RBP27.6■■■□□ 2.01
FAM3A-202ENST00000359889 ADGRL3Q9HAR2 1447 aa27.6■■■□□ 2.01
FAM3A-202ENST00000359889 PPM1GO15355 546 aaPredicted RBP27.59■■■□□ 2.01
FAM3A-202ENST00000359889 COL3A1P02461 1466 aaPredicted RBP27.59■■■□□ 2.01
FAM3A-202ENST00000359889 NCBP3Q53F19 620 aaKnown RBP27.58■■■□□ 2.01
FAM3A-202ENST00000359889 RCAN3Q9UKA8 241 aa27.58■■■□□ 2.01
FAM3A-202ENST00000359889 ZRANB1Q9UGI0 708 aa27.58■■■□□ 2.01
FAM3A-202ENST00000359889 RNF123Q5XPI4 1314 aa27.57■■■□□ 2
FAM3A-202ENST00000359889 FMN2Q9NZ56 1722 aa27.56■■■□□ 2
FAM3A-202ENST00000359889 TCP11L2Q8N4U5 519 aa27.55■■■□□ 2
FAM3A-202ENST00000359889 SSH2Q76I76 1423 aa27.55■■■□□ 2
FAM3A-202ENST00000359889 NRKQ7Z2Y5 1582 aa27.55■■■□□ 2
FAM3A-202ENST00000359889 NWD1Q149M9 1564 aa27.54■■■□□ 2
FAM3A-202ENST00000359889 IRX6P78412 446 aaPredicted RBP27.54■■■□□ 2
FAM3A-202ENST00000359889 E9PSI1 815 aa27.53■■■□□ 2
FAM3A-202ENST00000359889 PROSER2Q86WR7 435 aaPredicted RBP27.53■■■□□ 2
FAM3A-202ENST00000359889 MAPK8IP3Q9UPT6 1336 aa27.53■■■□□ 2
FAM3A-202ENST00000359889 SLFN5Q08AF3 891 aa27.53■■■□□ 2
FAM3A-202ENST00000359889 CDK12Q9NYV4 1490 aaPredicted RBP27.52■■■□□ 2
FAM3A-202ENST00000359889 OVOS2A0A0J9YW53 1432 aa27.52■■■□□ 2
FAM3A-202ENST00000359889 OVOS2Q6IE36 1432 aa27.52■■■□□ 2
FAM3A-202ENST00000359889 PHF8Q9UPP1 1060 aa27.52■■■□□ 2
FAM3A-202ENST00000359889 EMILIN1Q9Y6C2 1016 aa27.52■■■□□ 2
FAM3A-202ENST00000359889 NEFMP07197 916 aa27.51■■□□□ 1.99
FAM3A-202ENST00000359889 CCDC27Q2M243 656 aa27.51■■□□□ 1.99
FAM3A-202ENST00000359889 WWC1Q8IX03 1113 aa27.5■■□□□ 1.99
FAM3A-202ENST00000359889 NALCNQ8IZF0 1738 aa27.5■■□□□ 1.99
FAM3A-202ENST00000359889 FBLN1P23142 703 aa27.5■■□□□ 1.99
FAM3A-202ENST00000359889 RBM33Q96EV2 1170 aaKnown RBP27.5■■□□□ 1.99
FAM3A-202ENST00000359889 IQSEC2Q5JU85 1478 aa27.49■■□□□ 1.99
FAM3A-202ENST00000359889 FCHSD2O94868 740 aa27.49■■□□□ 1.99
FAM3A-202ENST00000359889 DUSP27Q5VZP5 1158 aa27.49■■□□□ 1.99
FAM3A-202ENST00000359889 KDM4FA0A1W2PPD8 638 aa27.48■■□□□ 1.99
FAM3A-202ENST00000359889 USP31Q70CQ4 1352 aa27.48■■□□□ 1.99
FAM3A-202ENST00000359889 RRS1Q15050 365 aaKnown RBP27.47■■□□□ 1.99
FAM3A-202ENST00000359889 NEUROD2Q15784 382 aa27.47■■□□□ 1.99
FAM3A-202ENST00000359889 WDR63Q8IWG1 891 aa27.47■■□□□ 1.99
FAM3A-202ENST00000359889 TRMT2AQ8IZ69 625 aaKnown RBP27.46■■□□□ 1.99
FAM3A-202ENST00000359889 PLEKHF1Q96S99 279 aa27.46■■□□□ 1.99
FAM3A-202ENST00000359889 RRP7AQ9Y3A4 280 aaKnown RBP27.46■■□□□ 1.99
FAM3A-202ENST00000359889 RRP1P56182 461 aaKnown RBP27.45■■□□□ 1.99
FAM3A-202ENST00000359889 PPP4R2Q9NY27 417 aa27.45■■□□□ 1.99
FAM3A-202ENST00000359889 ESCO1Q5FWF5 840 aa27.44■■□□□ 1.98
FAM3A-202ENST00000359889 HSPA2P54652 639 aa27.44■■□□□ 1.98
FAM3A-202ENST00000359889 PHF23Q9BUL5 403 aaPredicted RBP27.44■■□□□ 1.98
FAM3A-202ENST00000359889 C19orf44Q9H6X5 657 aa27.44■■□□□ 1.98
FAM3A-202ENST00000359889 IL13P35225 146 aa27.43■■□□□ 1.98
FAM3A-202ENST00000359889 RGPD8O14715 1765 aaPredicted RBP27.42■■□□□ 1.98
FAM3A-202ENST00000359889 NLRP6P59044 892 aa27.41■■□□□ 1.98
FAM3A-202ENST00000359889 PAK3O75914 559 aaPredicted RBP27.41■■□□□ 1.98
FAM3A-202ENST00000359889 PSME1Q06323 249 aa27.41■■□□□ 1.98
FAM3A-202ENST00000359889 MAP2P11137 1827 aaKnown RBP27.4■■□□□ 1.98
FAM3A-202ENST00000359889 NCOA3Q9Y6Q9 1424 aa27.4■■□□□ 1.98
FAM3A-202ENST00000359889 TMPOP42166 694 aaKnown RBP27.39■■□□□ 1.98
FAM3A-202ENST00000359889 ABTB2Q8N961 1025 aa27.38■■□□□ 1.97
FAM3A-202ENST00000359889 RSPH6AQ9H0K4 717 aa27.38■■□□□ 1.97
FAM3A-202ENST00000359889 PRKAR2BP31323 418 aa27.37■■□□□ 1.97
FAM3A-202ENST00000359889 MYH16Q9H6N6 1097 aa27.37■■□□□ 1.97
FAM3A-202ENST00000359889 SOX12O15370 315 aa27.36■■□□□ 1.97
FAM3A-202ENST00000359889 ATF3P18847 181 aa27.36■■□□□ 1.97
FAM3A-202ENST00000359889 SPINK5Q9NQ38 1064 aaPredicted RBP27.36■■□□□ 1.97
FAM3A-202ENST00000359889 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.35■■□□□ 1.97
FAM3A-202ENST00000359889 LMTK3Q96Q04 1460 aa27.34■■□□□ 1.97
FAM3A-202ENST00000359889 RIPK4P57078 832 aa27.33■■□□□ 1.97
FAM3A-202ENST00000359889 SBNO1A3KN83 1393 aa27.33■■□□□ 1.97
FAM3A-202ENST00000359889 TMEM94Q12767 1356 aa27.33■■□□□ 1.97
FAM3A-202ENST00000359889 MAP3K19Q56UN5 1328 aa27.33■■□□□ 1.96
FAM3A-202ENST00000359889 HMOX1P09601 288 aa27.33■■□□□ 1.96
FAM3A-202ENST00000359889 AMPHP49418 695 aa27.33■■□□□ 1.96
FAM3A-202ENST00000359889 DMRT2Q9Y5R5 561 aa27.33■■□□□ 1.96
FAM3A-202ENST00000359889 LRRC7Q96NW7 1537 aa27.32■■□□□ 1.96
FAM3A-202ENST00000359889 FLT4P35916 1363 aa27.32■■□□□ 1.96
FAM3A-202ENST00000359889 KIF24Q5T7B8 1368 aa27.32■■□□□ 1.96
FAM3A-202ENST00000359889 EIF4A2Q14240 407 aaKnown RBP27.32■■□□□ 1.96
FAM3A-202ENST00000359889 DCCP43146 1447 aa27.31■■□□□ 1.96
FAM3A-202ENST00000359889 PIK3C2AO00443 1686 aa27.31■■□□□ 1.96
FAM3A-202ENST00000359889 IL16Q14005 1332 aa27.3■■□□□ 1.96
FAM3A-202ENST00000359889 ORAI2Q96SN7 254 aa27.3■■□□□ 1.96
FAM3A-202ENST00000359889 NFE2L2Q16236 605 aa27.28■■□□□ 1.96
FAM3A-202ENST00000359889 NUTM2GQ5VZR2 741 aa27.28■■□□□ 1.96
FAM3A-202ENST00000359889 C1orf167Q5SNV9 1468 aa27.28■■□□□ 1.96
FAM3A-202ENST00000359889 HSP90AB2PQ58FF8 381 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms