RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 K7ELQ4 463 aaPredicted RBP17.32■□□□□ 0.36
NUP98-203ENST00000359171 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
NUP98-203ENST00000359171 TCP11L2Q8N4U5 519 aa17.32■□□□□ 0.36
NUP98-203ENST00000359171 LUC7LQ9NQ29 371 aaKnown RBP17.32■□□□□ 0.36
NUP98-203ENST00000359171 DACH1Q9UI36 760 aa17.32■□□□□ 0.36
NUP98-203ENST00000359171 ZFYVE27Q5T4F4 411 aa17.31■□□□□ 0.36
NUP98-203ENST00000359171 TXLNBQ8N3L3 684 aa17.31■□□□□ 0.36
NUP98-203ENST00000359171 SPC24Q8NBT2 197 aa17.31■□□□□ 0.36
NUP98-203ENST00000359171 UQCRHLA0A096LP55 91 aa17.31■□□□□ 0.36
NUP98-203ENST00000359171 UQCRHP07919 91 aa17.31■□□□□ 0.36
NUP98-203ENST00000359171 PDCL2Q8N4E4 241 aa17.31■□□□□ 0.36
NUP98-203ENST00000359171 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
NUP98-203ENST00000359171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.31■□□□□ 0.367e-10■■■■■ 30.5
NUP98-203ENST00000359171 SERPINC1P01008 464 aa17.3■□□□□ 0.36
NUP98-203ENST00000359171 TNMDQ9H2S6 317 aa17.3■□□□□ 0.36
NUP98-203ENST00000359171 KRT85P78386 507 aa17.3■□□□□ 0.36
NUP98-203ENST00000359171 ANKRD1Q15327 319 aa17.3■□□□□ 0.36
NUP98-203ENST00000359171 FBXO3Q9UK99 471 aa17.3■□□□□ 0.36
NUP98-203ENST00000359171 PPFIBP1Q86W92 1011 aa17.3■□□□□ 0.36
NUP98-203ENST00000359171 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
NUP98-203ENST00000359171 CBFA2T2O43439 604 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 SMARCA2P51531 1590 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 EVA1CP58658 441 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 TBC1D2BQ9UPU7 963 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 MYOM3Q5VTT5 1437 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 HMOX1P09601 288 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 TAF3Q5VWG9 929 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 CDCA7LQ96GN5 454 aa17.29■□□□□ 0.36
NUP98-203ENST00000359171 ZRSR2Q15696 482 aaKnown RBP17.28■□□□□ 0.36
NUP98-203ENST00000359171 CYP46A1Q9Y6A2 500 aa17.28■□□□□ 0.36
NUP98-203ENST00000359171 MCM4P33991 863 aa17.28■□□□□ 0.36
NUP98-203ENST00000359171 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
NUP98-203ENST00000359171 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
NUP98-203ENST00000359171 PDIA4P13667 645 aaKnown RBP17.27■□□□□ 0.36
NUP98-203ENST00000359171 ZSCAN30Q86W11 494 aa17.27■□□□□ 0.35
NUP98-203ENST00000359171 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
NUP98-203ENST00000359171 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
NUP98-203ENST00000359171 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
NUP98-203ENST00000359171 RAPGEF4Q8WZA2 1011 aa17.26■□□□□ 0.35
NUP98-203ENST00000359171 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
NUP98-203ENST00000359171 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
NUP98-203ENST00000359171 CEP57L1Q8IYX8 460 aa17.25■□□□□ 0.35
NUP98-203ENST00000359171 CCDC181Q5TID7 509 aa17.25■□□□□ 0.35
NUP98-203ENST00000359171 CDK5RAP3Q96JB5 506 aa17.25■□□□□ 0.35
NUP98-203ENST00000359171 IQCEQ6IPM2 695 aa17.25■□□□□ 0.35
NUP98-203ENST00000359171 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
NUP98-203ENST00000359171 GNAI2P04899 355 aa17.24■□□□□ 0.35
NUP98-203ENST00000359171 SKIDA1Q1XH10 827 aa17.24■□□□□ 0.35
NUP98-203ENST00000359171 MTHFSP49914 203 aa17.24■□□□□ 0.35
NUP98-203ENST00000359171 KIF2AO00139 706 aaPredicted RBP17.24■□□□□ 0.35
NUP98-203ENST00000359171 SYCP1Q15431 976 aa17.24■□□□□ 0.35
NUP98-203ENST00000359171 PLCD4Q9BRC7 762 aa17.24■□□□□ 0.35
NUP98-203ENST00000359171 STIM1Q13586 685 aa17.24■□□□□ 0.35
NUP98-203ENST00000359171 AIMP1Q12904 312 aaKnown RBP17.23■□□□□ 0.35
NUP98-203ENST00000359171 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
NUP98-203ENST00000359171 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
NUP98-203ENST00000359171 ME1P48163 572 aa17.23■□□□□ 0.35
NUP98-203ENST00000359171 RBM33Q96EV2 1170 aaKnown RBP17.23■□□□□ 0.35
NUP98-203ENST00000359171 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
NUP98-203ENST00000359171 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
NUP98-203ENST00000359171 DNAJC2Q99543 621 aaKnown RBP17.22■□□□□ 0.35
NUP98-203ENST00000359171 DEF6Q9H4E7 631 aa17.22■□□□□ 0.35
NUP98-203ENST00000359171 NEFHP12036 1026 aa17.22■□□□□ 0.35
NUP98-203ENST00000359171 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
NUP98-203ENST00000359171 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.35
NUP98-203ENST00000359171 NUP62CLQ9H1M0 184 aa17.21■□□□□ 0.35
NUP98-203ENST00000359171 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.35
NUP98-203ENST00000359171 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
NUP98-203ENST00000359171 SLC3A2P08195 630 aaKnown RBP17.21■□□□□ 0.34
NUP98-203ENST00000359171 UBXN4Q92575 508 aa17.21■□□□□ 0.34
NUP98-203ENST00000359171 PSME1Q06323 249 aa17.2■□□□□ 0.34
NUP98-203ENST00000359171 TOP2AP11388 1531 aaKnown RBP17.2■□□□□ 0.34
NUP98-203ENST00000359171 GBP3Q9H0R5 595 aa17.2■□□□□ 0.34
NUP98-203ENST00000359171 PPP6R1Q9UPN7 881 aa17.2■□□□□ 0.34
NUP98-203ENST00000359171 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
NUP98-203ENST00000359171 INCENPQ9NQS7 918 aa17.2■□□□□ 0.34
NUP98-203ENST00000359171 SRCIN1Q9C0H9 1055 aa17.2■□□□□ 0.34
NUP98-203ENST00000359171 CFAP45Q9UL16 551 aa17.2■□□□□ 0.34
NUP98-203ENST00000359171 FYB1O15117 783 aa17.19■□□□□ 0.34
NUP98-203ENST00000359171 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
NUP98-203ENST00000359171 CCT4P50991 539 aaKnown RBP17.19■□□□□ 0.34
NUP98-203ENST00000359171 KRT18P05783 430 aaKnown RBP17.19■□□□□ 0.34
NUP98-203ENST00000359171 SPATA32Q96LK8 384 aa17.19■□□□□ 0.34
NUP98-203ENST00000359171 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
NUP98-203ENST00000359171 SMG6Q86US8 1419 aaKnown RBP17.19■□□□□ 0.34
NUP98-203ENST00000359171 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
NUP98-203ENST00000359171 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
NUP98-203ENST00000359171 NOB1Q9ULX3 412 aaKnown RBP17.18■□□□□ 0.34
NUP98-203ENST00000359171 SMTNL1A8MU46 457 aa17.18■□□□□ 0.34
NUP98-203ENST00000359171 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
NUP98-203ENST00000359171 SEPT7Q16181 437 aaKnown RBP17.17■□□□□ 0.34
NUP98-203ENST00000359171 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
NUP98-203ENST00000359171 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
NUP98-203ENST00000359171 TMCO3Q6UWJ1 677 aa17.17■□□□□ 0.34
NUP98-203ENST00000359171 MPNDQ8N594 471 aa17.17■□□□□ 0.34
NUP98-203ENST00000359171 CCDC102AQ96A19 550 aa17.17■□□□□ 0.34
NUP98-203ENST00000359171 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
NUP98-203ENST00000359171 MSH5O43196 834 aa17.16■□□□□ 0.34
NUP98-203ENST00000359171 ATF7IPQ6VMQ6 1270 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms