RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 MYBBP1AQ9BQG0 1328 aaKnown RBP14.54□□□□□ -0.08
TRAPPC4-201ENST00000359005 KNDC1Q76NI1 1749 aa14.54□□□□□ -0.08
TRAPPC4-201ENST00000359005 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
TRAPPC4-201ENST00000359005 PSME1Q06323 249 aa14.53□□□□□ -0.08
TRAPPC4-201ENST00000359005 BRD4O60885 1362 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC4-201ENST00000359005 NPC1L1Q9UHC9 1359 aa14.52□□□□□ -0.08
TRAPPC4-201ENST00000359005 TMC1Q8TDI8 760 aa14.52□□□□□ -0.09
TRAPPC4-201ENST00000359005 UPF1Q92900 1129 aaKnown RBP eCLIP14.52□□□□□ -0.09
TRAPPC4-201ENST00000359005 CDK19Q9BWU1 502 aa14.52□□□□□ -0.09
TRAPPC4-201ENST00000359005 BCL9LQ86UU0 1499 aa14.51□□□□□ -0.09
TRAPPC4-201ENST00000359005 LMOD2Q6P5Q4 547 aa14.51□□□□□ -0.09
TRAPPC4-201ENST00000359005 NUDT16Q96DE0 195 aaKnown RBP14.51□□□□□ -0.09
TRAPPC4-201ENST00000359005 FMN2Q9NZ56 1722 aa14.51□□□□□ -0.09
TRAPPC4-201ENST00000359005 ATAD2Q6PL18 1390 aa14.5□□□□□ -0.09
TRAPPC4-201ENST00000359005 PER1O15534 1290 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC4-201ENST00000359005 NLRP13Q86W25 1043 aa14.5□□□□□ -0.09
TRAPPC4-201ENST00000359005 ANKARQ7Z5J8 1434 aa14.49□□□□□ -0.09
TRAPPC4-201ENST00000359005 RGS12O14924 1447 aa14.49□□□□□ -0.09
TRAPPC4-201ENST00000359005 SBNO1A3KN83 1393 aa14.48□□□□□ -0.09
TRAPPC4-201ENST00000359005 USP32Q8NFA0 1604 aa14.48□□□□□ -0.09
TRAPPC4-201ENST00000359005 PARD3Q8TEW0 1356 aa14.48□□□□□ -0.09
TRAPPC4-201ENST00000359005 FAM83GA6ND36 823 aa14.48□□□□□ -0.09
TRAPPC4-201ENST00000359005 TRPC5Q9UL62 973 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC4-201ENST00000359005 TNS3Q68CZ2 1445 aa14.48□□□□□ -0.09
TRAPPC4-201ENST00000359005 NGDNQ8NEJ9 315 aaKnown RBP14.47□□□□□ -0.09
TRAPPC4-201ENST00000359005 ATRNO75882 1429 aa14.47□□□□□ -0.09
TRAPPC4-201ENST00000359005 MYOM1P52179 1685 aa14.46□□□□□ -0.09
TRAPPC4-201ENST00000359005 COL22A1Q8NFW1 1626 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC4-201ENST00000359005 UNC5CLQ8IV45 518 aa14.46□□□□□ -0.09
TRAPPC4-201ENST00000359005 ADGRB2O60241 1585 aa14.45□□□□□ -0.1
TRAPPC4-201ENST00000359005 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
TRAPPC4-201ENST00000359005 SRCAPQ6ZRS2 3230 aa14.45□□□□□ -0.1
TRAPPC4-201ENST00000359005 GJD4Q96KN9 370 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC4-201ENST00000359005 CABP2Q9NPB3 220 aa14.45□□□□□ -0.1
TRAPPC4-201ENST00000359005 TERF2IPQ9NYB0 399 aa14.45□□□□□ -0.1
TRAPPC4-201ENST00000359005 CDK12Q9NYV4 1490 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-201ENST00000359005 NSD2O96028 1365 aa14.44□□□□□ -0.1
TRAPPC4-201ENST00000359005 ATP7BP35670 1465 aa14.44□□□□□ -0.1
TRAPPC4-201ENST00000359005 ACEP12821 1306 aa14.43□□□□□ -0.1
TRAPPC4-201ENST00000359005 RGPD8O14715 1765 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC4-201ENST00000359005 SLIT2O94813 1529 aa14.43□□□□□ -0.1
TRAPPC4-201ENST00000359005 TULP4Q9NRJ4 1543 aa14.43□□□□□ -0.1
TRAPPC4-201ENST00000359005 PLEKHG3A1L390 1219 aa14.43□□□□□ -0.1
TRAPPC4-201ENST00000359005 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC4-201ENST00000359005 NUTM2GQ5VZR2 741 aa14.43□□□□□ -0.1
TRAPPC4-201ENST00000359005 CCDC61Q9Y6R9 512 aa14.43□□□□□ -0.1
TRAPPC4-201ENST00000359005 CGNL1Q0VF96 1302 aa14.42□□□□□ -0.1
TRAPPC4-201ENST00000359005 HNRNPUQ00839 825 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAPPC4-201ENST00000359005 CC2D1BQ5T0F9 858 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-201ENST00000359005 HDGFL2Q7Z4V5 671 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC4-201ENST00000359005 FAM9BQ8IZU0 186 aa14.42□□□□□ -0.1
TRAPPC4-201ENST00000359005 INSRP06213 1382 aa14.42□□□□□ -0.1
TRAPPC4-201ENST00000359005 ANKRD36BQ8N2N9 1353 aa14.42□□□□□ -0.1
TRAPPC4-201ENST00000359005 HAP1P54257 671 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-201ENST00000359005 ARHGEF10O15013 1369 aa14.41□□□□□ -0.1
TRAPPC4-201ENST00000359005 EP400Q96L91 3159 aa14.4□□□□□ -0.1
TRAPPC4-201ENST00000359005 KIF1AQ12756 1690 aa14.4□□□□□ -0.1
TRAPPC4-201ENST00000359005 CNGB1Q14028 1251 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-201ENST00000359005 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-201ENST00000359005 POLR3AO14802 1390 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-201ENST00000359005 VPS72Q15906 364 aa14.39□□□□□ -0.11
TRAPPC4-201ENST00000359005 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
TRAPPC4-201ENST00000359005 BTG4Q9NY30 223 aa14.38□□□□□ -0.11
TRAPPC4-201ENST00000359005 CHRNA2Q15822 529 aa14.37□□□□□ -0.11
TRAPPC4-201ENST00000359005 PNISRQ8TF01 805 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-201ENST00000359005 ZBED9Q6R2W3 1325 aa14.37□□□□□ -0.11
TRAPPC4-201ENST00000359005 NSD3Q9BZ95 1437 aa14.36□□□□□ -0.11
TRAPPC4-201ENST00000359005 ONECUT3O60422 494 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-201ENST00000359005 ZC3H6P61129 1189 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-201ENST00000359005 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
TRAPPC4-201ENST00000359005 SEPT12Q8IYM1 358 aa14.36□□□□□ -0.11
TRAPPC4-201ENST00000359005 WDR43Q15061 677 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRAPPC4-201ENST00000359005 SLC12A5Q9H2X9 1139 aa14.35□□□□□ -0.11
TRAPPC4-201ENST00000359005 TRPM3Q9HCF6 1732 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-201ENST00000359005 PPP2R1AP30153 589 aa14.34□□□□□ -0.11
TRAPPC4-201ENST00000359005 ABTB2Q8N961 1025 aa14.34□□□□□ -0.11
TRAPPC4-201ENST00000359005 CFAP53Q96M91 514 aa14.34□□□□□ -0.11
TRAPPC4-201ENST00000359005 CCDC9Q9Y3X0 531 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-201ENST00000359005 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
TRAPPC4-201ENST00000359005 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.11
TRAPPC4-201ENST00000359005 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-201ENST00000359005 PRDM11Q9NQV5 511 aa14.33□□□□□ -0.12
TRAPPC4-201ENST00000359005 GLI3P10071 1580 aa14.33□□□□□ -0.12
TRAPPC4-201ENST00000359005 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-201ENST00000359005 CCDC184Q52MB2 194 aa14.32□□□□□ -0.12
TRAPPC4-201ENST00000359005 NEFLP07196 543 aa14.31□□□□□ -0.12
TRAPPC4-201ENST00000359005 NGEFQ8N5V2 710 aa14.31□□□□□ -0.12
TRAPPC4-201ENST00000359005 CARD14Q9BXL6 1004 aa14.31□□□□□ -0.12
TRAPPC4-201ENST00000359005 ALS2Q96Q42 1657 aa14.3□□□□□ -0.12
TRAPPC4-201ENST00000359005 GCP02774 474 aa14.3□□□□□ -0.12
TRAPPC4-201ENST00000359005 SPATA31A5Q5VU36 1347 aa14.3□□□□□ -0.12
TRAPPC4-201ENST00000359005 SPATA31A7Q8IWB4 1347 aa14.3□□□□□ -0.12
TRAPPC4-201ENST00000359005 SSH2Q76I76 1423 aa14.3□□□□□ -0.12
TRAPPC4-201ENST00000359005 FAM182BQ5T319 152 aa14.29□□□□□ -0.12
TRAPPC4-201ENST00000359005 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
TRAPPC4-201ENST00000359005 USP19O94966 1318 aa14.29□□□□□ -0.12
TRAPPC4-201ENST00000359005 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
TRAPPC4-201ENST00000359005 PDE3BQ13370 1112 aa14.28□□□□□ -0.12
TRAPPC4-201ENST00000359005 STRN4Q9NRL3 753 aa14.28□□□□□ -0.12
TRAPPC4-201ENST00000359005 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms