RNA–Protein interactions for RNA: ENST00000357884.8

C19orf47-201, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 5

Gene C19orf47, Length 1,774 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-201ENST00000357884 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.42■■□□□ 1.18
C19orf47-201ENST00000357884 CPSF1Q10570 1443 aaKnown RBP22.41■■□□□ 1.18
C19orf47-201ENST00000357884 SLFN5Q08AF3 891 aa22.4■■□□□ 1.18
C19orf47-201ENST00000357884 STRCP1A6NGW2 1772 aa22.4■■□□□ 1.18
C19orf47-201ENST00000357884 NCBP3Q53F19 620 aaKnown RBP22.4■■□□□ 1.18
C19orf47-201ENST00000357884 TCERG1O14776 1098 aaKnown RBP22.39■■□□□ 1.17
C19orf47-201ENST00000357884 NWD1Q149M9 1564 aa22.39■■□□□ 1.17
C19orf47-201ENST00000357884 CDC42BPGQ6DT37 1551 aa22.39■■□□□ 1.17
C19orf47-201ENST00000357884 C14orf37Q86TY3 774 aa22.38■■□□□ 1.17
C19orf47-201ENST00000357884 MSH5O43196 834 aa22.38■■□□□ 1.17
C19orf47-201ENST00000357884 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.38■■□□□ 1.17
C19orf47-201ENST00000357884 EDC4Q6P2E9 1401 aaKnown RBP22.37■■□□□ 1.17
C19orf47-201ENST00000357884 MS4A1P11836 297 aa22.36■■□□□ 1.17
C19orf47-201ENST00000357884 ZNF692Q9BU19 519 aaPredicted RBP22.36■■□□□ 1.17
C19orf47-201ENST00000357884 FYB1O15117 783 aa22.35■■□□□ 1.17
C19orf47-201ENST00000357884 E9PSI1 815 aa22.35■■□□□ 1.17
C19orf47-201ENST00000357884 NKTRP30414 1462 aaKnown RBP22.35■■□□□ 1.17
C19orf47-201ENST00000357884 PRR36Q9H6K5 1346 aa22.35■■□□□ 1.17
C19orf47-201ENST00000357884 ANKRD26Q9UPS8 1709 aa22.35■■□□□ 1.17
C19orf47-201ENST00000357884 TOPAZ1Q8N9V7 1692 aa22.34■■□□□ 1.17
C19orf47-201ENST00000357884 PLEKHG3A1L390 1219 aa22.33■■□□□ 1.16
C19orf47-201ENST00000357884 ANKARQ7Z5J8 1434 aa22.32■■□□□ 1.16
C19orf47-201ENST00000357884 TMEM94Q12767 1356 aa22.32■■□□□ 1.16
C19orf47-201ENST00000357884 SHPRHQ149N8 1683 aa22.32■■□□□ 1.16
C19orf47-201ENST00000357884 CFAP53Q96M91 514 aa22.31■■□□□ 1.16
C19orf47-201ENST00000357884 APAF1O14727 1248 aa22.3■■□□□ 1.16
C19orf47-201ENST00000357884 KIF20BQ96Q89 1820 aa22.3■■□□□ 1.16
C19orf47-201ENST00000357884 MON2Q7Z3U7 1717 aa22.3■■□□□ 1.16
C19orf47-201ENST00000357884 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
C19orf47-201ENST00000357884 NUTM2FA1L443 756 aa22.29■■□□□ 1.16
C19orf47-201ENST00000357884 CRBNQ96SW2 442 aa22.29■■□□□ 1.16
C19orf47-201ENST00000357884 AKAP12Q02952 1782 aa22.28■■□□□ 1.16
C19orf47-201ENST00000357884 MTHFSP49914 203 aa22.27■■□□□ 1.16
C19orf47-201ENST00000357884 ITSN1Q15811 1721 aa22.27■■□□□ 1.16
C19orf47-201ENST00000357884 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
C19orf47-201ENST00000357884 TNNT2P45379 298 aaPredicted RBP22.27■■□□□ 1.16
C19orf47-201ENST00000357884 C19orf44Q9H6X5 657 aa22.27■■□□□ 1.16
C19orf47-201ENST00000357884 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
C19orf47-201ENST00000357884 ADGRL3Q9HAR2 1447 aa22.26■■□□□ 1.15
C19orf47-201ENST00000357884 IQSEC2Q5JU85 1478 aa22.25■■□□□ 1.15
C19orf47-201ENST00000357884 PLIN1O60240 522 aa22.25■■□□□ 1.15
C19orf47-201ENST00000357884 CCDC146Q8IYE0 955 aa22.25■■□□□ 1.15
C19orf47-201ENST00000357884 RUNDC1Q96C34 613 aa22.25■■□□□ 1.15
C19orf47-201ENST00000357884 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
C19orf47-201ENST00000357884 CCDC27Q2M243 656 aa22.25■■□□□ 1.15
C19orf47-201ENST00000357884 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.24■■□□□ 1.15
C19orf47-201ENST00000357884 ACEP12821 1306 aa22.24■■□□□ 1.15
C19orf47-201ENST00000357884 ERICH6Q7L0X2 663 aa22.23■■□□□ 1.15
C19orf47-201ENST00000357884 USP6P35125 1406 aa22.22■■□□□ 1.15
C19orf47-201ENST00000357884 NCOA3Q9Y6Q9 1424 aa22.22■■□□□ 1.15
C19orf47-201ENST00000357884 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
C19orf47-201ENST00000357884 ATF3P18847 181 aa22.22■■□□□ 1.15
C19orf47-201ENST00000357884 ANP32AP39687 249 aaKnown RBP22.22■■□□□ 1.15
C19orf47-201ENST00000357884 WWC1Q8IX03 1113 aa22.22■■□□□ 1.15
C19orf47-201ENST00000357884 KDM2BQ8NHM5 1336 aa22.22■■□□□ 1.15
C19orf47-201ENST00000357884 FMN2Q9NZ56 1722 aa22.21■■□□□ 1.15
C19orf47-201ENST00000357884 MSH6P52701 1360 aa22.21■■□□□ 1.15
C19orf47-201ENST00000357884 NRKQ7Z2Y5 1582 aa22.21■■□□□ 1.15
C19orf47-201ENST00000357884 CENPQQ7L2Z9 268 aaPredicted RBP22.21■■□□□ 1.15
C19orf47-201ENST00000357884 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
C19orf47-201ENST00000357884 AATKQ6ZMQ8 1374 aa22.21■■□□□ 1.15
C19orf47-201ENST00000357884 LTBP4Q8N2S1 1624 aa22.21■■□□□ 1.15
C19orf47-201ENST00000357884 COG3Q96JB2 828 aa22.19■■□□□ 1.14
C19orf47-201ENST00000357884 PNPLA6Q8IY17 1366 aa22.19■■□□□ 1.14
C19orf47-201ENST00000357884 SSH2Q76I76 1423 aa22.19■■□□□ 1.14
C19orf47-201ENST00000357884 TTC21BQ7Z4L5 1316 aa22.18■■□□□ 1.14
C19orf47-201ENST00000357884 TTC21AQ8NDW8 1320 aa22.18■■□□□ 1.14
C19orf47-201ENST00000357884 PDE3AQ14432 1141 aa22.17■■□□□ 1.14
C19orf47-201ENST00000357884 NME9Q86XW9 330 aa22.17■■□□□ 1.14
C19orf47-201ENST00000357884 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
C19orf47-201ENST00000357884 C20orf194Q5TEA3 1177 aa22.17■■□□□ 1.14
C19orf47-201ENST00000357884 CADPS2Q86UW7 1296 aa22.17■■□□□ 1.14
C19orf47-201ENST00000357884 IPO9Q96P70 1041 aaKnown RBP22.17■■□□□ 1.14
C19orf47-201ENST00000357884 BACH2Q9BYV9 841 aa22.17■■□□□ 1.14
C19orf47-201ENST00000357884 COL3A1P02461 1466 aaPredicted RBP22.17■■□□□ 1.14
C19orf47-201ENST00000357884 AAMPQ13685 434 aa22.16■■□□□ 1.14
C19orf47-201ENST00000357884 PDE4AP27815 886 aa22.15■■□□□ 1.14
C19orf47-201ENST00000357884 NGDNQ8NEJ9 315 aaKnown RBP22.15■■□□□ 1.14
C19orf47-201ENST00000357884 NOP58Q9Y2X3 529 aaKnown RBP22.15■■□□□ 1.14
C19orf47-201ENST00000357884 RGPD8O14715 1765 aaPredicted RBP22.15■■□□□ 1.14
C19orf47-201ENST00000357884 TCP11L2Q8N4U5 519 aa22.13■■□□□ 1.13
C19orf47-201ENST00000357884 OVOS2A0A0J9YW53 1432 aa22.13■■□□□ 1.13
C19orf47-201ENST00000357884 OVOS2Q6IE36 1432 aa22.13■■□□□ 1.13
C19orf47-201ENST00000357884 ESCO1Q5FWF5 840 aa22.12■■□□□ 1.13
C19orf47-201ENST00000357884 PMFBP1Q8TBY8 1022 aa22.12■■□□□ 1.13
C19orf47-201ENST00000357884 POLKQ9UBT6 870 aa22.12■■□□□ 1.13
C19orf47-201ENST00000357884 DCCP43146 1447 aa22.12■■□□□ 1.13
C19orf47-201ENST00000357884 CDK12Q9NYV4 1490 aaPredicted RBP22.1■■□□□ 1.13
C19orf47-201ENST00000357884 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
C19orf47-201ENST00000357884 ORAI2Q96SN7 254 aa22.1■■□□□ 1.13
C19orf47-201ENST00000357884 USP31Q70CQ4 1352 aa22.09■■□□□ 1.13
C19orf47-201ENST00000357884 CT47B1P0C2W7 299 aaPredicted RBP22.09■■□□□ 1.13
C19orf47-201ENST00000357884 U2AF1L5P0DN76 240 aaPredicted RBP22.08■■□□□ 1.13
C19orf47-201ENST00000357884 U2AF1Q01081 240 aaKnown RBP eCLIP22.08■■□□□ 1.13
C19orf47-201ENST00000357884 SLAIN2Q9P270 581 aa22.08■■□□□ 1.13
C19orf47-201ENST00000357884 PHF8Q9UPP1 1060 aa22.07■■□□□ 1.12
C19orf47-201ENST00000357884 MST1RQ04912 1400 aa22.07■■□□□ 1.12
C19orf47-201ENST00000357884 C1orf167Q5SNV9 1468 aa22.07■■□□□ 1.12
C19orf47-201ENST00000357884 PNNQ9H307 717 aaKnown RBP22.07■■□□□ 1.12
C19orf47-201ENST00000357884 ZRANB1Q9UGI0 708 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms