RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 CLTCL1P53675 1640 aa9.55□□□□□ -0.88
CD46-204ENST00000357714 KIF16BQ96L93 1317 aa9.55□□□□□ -0.88
CD46-204ENST00000357714 ZNF518AQ6AHZ1 1483 aa9.55□□□□□ -0.88
CD46-204ENST00000357714 CEP152O94986 1710 aa9.55□□□□□ -0.88
CD46-204ENST00000357714 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
CD46-204ENST00000357714 RIPK4P57078 832 aa9.54□□□□□ -0.88
CD46-204ENST00000357714 PDCL3Q9H2J4 239 aa9.54□□□□□ -0.88
CD46-204ENST00000357714 NCBP3Q53F19 620 aaKnown RBP9.54□□□□□ -0.88
CD46-204ENST00000357714 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
CD46-204ENST00000357714 TBC1D9Q6ZT07 1266 aa9.53□□□□□ -0.88
CD46-204ENST00000357714 KIF2CQ99661 725 aa9.53□□□□□ -0.88
CD46-204ENST00000357714 C1orf115Q9H7X2 142 aa9.53□□□□□ -0.88
CD46-204ENST00000357714 BAG4O95429 457 aaKnown RBP9.53□□□□□ -0.88
CD46-204ENST00000357714 CALD1Q05682 793 aaKnown RBP9.53□□□□□ -0.88
CD46-204ENST00000357714 KLHL40Q2TBA0 621 aa9.53□□□□□ -0.88
CD46-204ENST00000357714 PPP1R9BQ96SB3 815 aa9.53□□□□□ -0.88
CD46-204ENST00000357714 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
CD46-204ENST00000357714 SAFB2Q14151 953 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■■□□□ 13.1
CD46-204ENST00000357714 MCTP1Q6DN14 999 aa9.53□□□□□ -0.88
CD46-204ENST00000357714 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.53□□□□□ -0.88
CD46-204ENST00000357714 ARID3AQ99856 593 aa9.53□□□□□ -0.88
CD46-204ENST00000357714 RBM10P98175 930 aaKnown RBP9.52□□□□□ -0.89
CD46-204ENST00000357714 CAVIN1Q6NZI2 390 aaKnown RBP9.52□□□□□ -0.89
CD46-204ENST00000357714 ERCC6L2Q5T890 1561 aa9.52□□□□□ -0.89
CD46-204ENST00000357714 UGGT1Q9NYU2 1555 aa9.52□□□□□ -0.89
CD46-204ENST00000357714 NOS1P29475 1434 aa9.52□□□□□ -0.89
CD46-204ENST00000357714 OFD1O75665 1012 aa9.52□□□□□ -0.89
CD46-204ENST00000357714 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
CD46-204ENST00000357714 ABCC11Q96J66 1382 aa9.51□□□□□ -0.89
CD46-204ENST00000357714 GCC1Q96CN9 775 aa9.51□□□□□ -0.89
CD46-204ENST00000357714 CABP2Q9NPB3 220 aa9.51□□□□□ -0.89
CD46-204ENST00000357714 R3HCC1Q9Y3T6 440 aaKnown RBP9.51□□□□□ -0.89
CD46-204ENST00000357714 SHPRHQ149N8 1683 aa9.51□□□□□ -0.89
CD46-204ENST00000357714 MYOM2P54296 1465 aa9.51□□□□□ -0.89
CD46-204ENST00000357714 EVC2Q86UK5 1308 aa9.51□□□□□ -0.89
CD46-204ENST00000357714 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
CD46-204ENST00000357714 CHMP4BQ9H444 224 aaKnown RBP9.51□□□□□ -0.89
CD46-204ENST00000357714 UHRF1BP1LA0JNW5 1464 aa9.5□□□□□ -0.89
CD46-204ENST00000357714 CDC45O75419 566 aa9.5□□□□□ -0.89
CD46-204ENST00000357714 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
CD46-204ENST00000357714 PLEKHF1Q96S99 279 aa9.5□□□□□ -0.89
CD46-204ENST00000357714 SENP3Q9H4L4 574 aaPredicted RBP9.5□□□□□ -0.89
CD46-204ENST00000357714 C14orf93Q9H972 538 aaKnown RBP9.5□□□□□ -0.89
CD46-204ENST00000357714 ABCA6Q8N139 1617 aa9.5□□□□□ -0.89
CD46-204ENST00000357714 MAP3K4Q9Y6R4 1608 aa9.5□□□□□ -0.89
CD46-204ENST00000357714 NUCB2P80303 420 aa9.5□□□□□ -0.89
CD46-204ENST00000357714 IL16Q14005 1332 aa9.49□□□□□ -0.89
CD46-204ENST00000357714 ALDH1L2Q3SY69 923 aa9.49□□□□□ -0.89
CD46-204ENST00000357714 CD109Q6YHK3 1445 aa9.49□□□□□ -0.89
CD46-204ENST00000357714 ABCC1P33527 1531 aa9.49□□□□□ -0.89
CD46-204ENST00000357714 ELL2O00472 640 aaPredicted RBP9.49□□□□□ -0.89
CD46-204ENST00000357714 SRPK2P78362 688 aaKnown RBP9.49□□□□□ -0.89
CD46-204ENST00000357714 KIAA1210Q9ULL0 1709 aa9.49□□□□□ -0.89
CD46-204ENST00000357714 NSD2O96028 1365 aa9.49□□□□□ -0.89
CD46-204ENST00000357714 RABEP1Q15276 862 aa9.49□□□□□ -0.89
CD46-204ENST00000357714 ZSCAN23Q3MJ62 389 aa9.49□□□□□ -0.89
CD46-204ENST00000357714 ANKRD36BQ8N2N9 1353 aa9.48□□□□□ -0.89
CD46-204ENST00000357714 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
CD46-204ENST00000357714 DIAPH1O60610 1272 aaKnown RBP9.48□□□□□ -0.89
CD46-204ENST00000357714 XPCQ01831 940 aaPredicted RBP9.48□□□□□ -0.89
CD46-204ENST00000357714 ADGRL1O94910 1474 aa9.48□□□□□ -0.89
CD46-204ENST00000357714 ZNF445P59923 1031 aa9.48□□□□□ -0.89
CD46-204ENST00000357714 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
CD46-204ENST00000357714 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
CD46-204ENST00000357714 TET3O43151 1660 aa9.47□□□□□ -0.89
CD46-204ENST00000357714 CLEC17AQ6ZS10 378 aa9.47□□□□□ -0.89
CD46-204ENST00000357714 RBSNQ9H1K0 784 aa9.47□□□□□ -0.89
CD46-204ENST00000357714 PPIP5K1Q6PFW1 1433 aa9.47□□□□□ -0.89
CD46-204ENST00000357714 PRIM1P49642 420 aaKnown RBP9.46□□□□□ -0.89
CD46-204ENST00000357714 PKP1Q13835 747 aa9.46□□□□□ -0.89
CD46-204ENST00000357714 STK26Q9P289 416 aa9.46□□□□□ -0.89
CD46-204ENST00000357714 NOL7Q9UMY1 257 aaKnown RBP9.46□□□□□ -0.89
CD46-204ENST00000357714 ZFYVE16Q7Z3T8 1539 aa9.46□□□□□ -0.9
CD46-204ENST00000357714 UQCRHLA0A096LP55 91 aa9.46□□□□□ -0.9
CD46-204ENST00000357714 UQCRHP07919 91 aa9.46□□□□□ -0.9
CD46-204ENST00000357714 HS1BP3Q53T59 392 aa9.46□□□□□ -0.9
CD46-204ENST00000357714 LMBRD1Q9NUN5 540 aa9.46□□□□□ -0.9
CD46-204ENST00000357714 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
CD46-204ENST00000357714 TERF1P54274 439 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 MAP7D2Q96T17 732 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 THUMPD2Q9BTF0 503 aaKnown RBP9.45□□□□□ -0.9
CD46-204ENST00000357714 PRDM4Q9UKN5 801 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 ST18O60284 1047 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 FOXD4L5Q5VV16 416 aaPredicted RBP9.45□□□□□ -0.9
CD46-204ENST00000357714 GGT6Q6P531 493 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 SIRT2Q8IXJ6 389 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 FOXD4L4Q8WXT5 416 aaPredicted RBP9.45□□□□□ -0.9
CD46-204ENST00000357714 ZNF428Q96B54 188 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
CD46-204ENST00000357714 GSPT1P15170 499 aaKnown RBP9.45□□□□□ -0.9
CD46-204ENST00000357714 ZCCHC11Q5TAX3 1644 aaKnown RBP9.44□□□□□ -0.9
CD46-204ENST00000357714 APBB1O00213 710 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 PTMAP06454 111 aaKnown RBP9.44□□□□□ -0.9
CD46-204ENST00000357714 TERF2IPQ9NYB0 399 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 ADGRB2O60241 1585 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 FYB1O15117 783 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 VAMP4O75379 141 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 CASC1Q6TDU7 716 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 ZGPATQ8N5A5 531 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms