RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 TRPM3Q9HCF6 1732 aaPredicted RBP12.7□□□□□ -0.38
COL4A3BP-202ENST00000357457 ADGRB1O14514 1584 aa12.69□□□□□ -0.38
COL4A3BP-202ENST00000357457 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
COL4A3BP-202ENST00000357457 PRR36Q9H6K5 1346 aa12.68□□□□□ -0.38
COL4A3BP-202ENST00000357457 ALS2Q96Q42 1657 aa12.68□□□□□ -0.38
COL4A3BP-202ENST00000357457 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
COL4A3BP-202ENST00000357457 BTG4Q9NY30 223 aa12.68□□□□□ -0.38
COL4A3BP-202ENST00000357457 TRAK1Q9UPV9 953 aa12.68□□□□□ -0.38
COL4A3BP-202ENST00000357457 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
COL4A3BP-202ENST00000357457 WASLO00401 505 aaPredicted RBP12.67□□□□□ -0.38
COL4A3BP-202ENST00000357457 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
COL4A3BP-202ENST00000357457 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
COL4A3BP-202ENST00000357457 COL14A1Q05707 1796 aaKnown RBP12.66□□□□□ -0.38
COL4A3BP-202ENST00000357457 BAG6P46379 1132 aa12.66□□□□□ -0.38
COL4A3BP-202ENST00000357457 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
COL4A3BP-202ENST00000357457 EIF3AQ14152 1382 aaKnown RBP12.66□□□□□ -0.38
COL4A3BP-202ENST00000357457 SPATA31A5Q5VU36 1347 aa12.65□□□□□ -0.38
COL4A3BP-202ENST00000357457 SPATA31A7Q8IWB4 1347 aa12.65□□□□□ -0.38
COL4A3BP-202ENST00000357457 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
COL4A3BP-202ENST00000357457 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
COL4A3BP-202ENST00000357457 LRP5O75197 1615 aa12.65□□□□□ -0.38
COL4A3BP-202ENST00000357457 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
COL4A3BP-202ENST00000357457 CRYBG1Q9Y4K1 1723 aa12.64□□□□□ -0.39
COL4A3BP-202ENST00000357457 RAB3GAP2Q9H2M9 1393 aa12.64□□□□□ -0.39
COL4A3BP-202ENST00000357457 HRCP23327 699 aa12.63□□□□□ -0.39
COL4A3BP-202ENST00000357457 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
COL4A3BP-202ENST00000357457 DCAF11Q8TEB1 546 aa12.63□□□□□ -0.39
COL4A3BP-202ENST00000357457 A0A0G2JS52 829 aa12.62□□□□□ -0.39
COL4A3BP-202ENST00000357457 MYT1Q01538 1121 aa12.62□□□□□ -0.39
COL4A3BP-202ENST00000357457 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
COL4A3BP-202ENST00000357457 KDM2AQ9Y2K7 1162 aa12.62□□□□□ -0.39
COL4A3BP-202ENST00000357457 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
COL4A3BP-202ENST00000357457 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
COL4A3BP-202ENST00000357457 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
COL4A3BP-202ENST00000357457 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
COL4A3BP-202ENST00000357457 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
COL4A3BP-202ENST00000357457 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
COL4A3BP-202ENST00000357457 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
COL4A3BP-202ENST00000357457 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
COL4A3BP-202ENST00000357457 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
COL4A3BP-202ENST00000357457 ATP7BP35670 1465 aa12.59□□□□□ -0.39
COL4A3BP-202ENST00000357457 KIAA0232Q92628 1395 aa12.58□□□□□ -0.4
COL4A3BP-202ENST00000357457 ITSN1Q15811 1721 aa12.58□□□□□ -0.4
COL4A3BP-202ENST00000357457 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
COL4A3BP-202ENST00000357457 ARHGEF28Q8N1W1 1705 aaKnown RBP12.58□□□□□ -0.4
COL4A3BP-202ENST00000357457 CAMKK2Q96RR4 588 aa12.58□□□□□ -0.4
COL4A3BP-202ENST00000357457 POLR3AO14802 1390 aaPredicted RBP12.57□□□□□ -0.4
COL4A3BP-202ENST00000357457 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
COL4A3BP-202ENST00000357457 PLEKHG3A1L390 1219 aa12.57□□□□□ -0.4
COL4A3BP-202ENST00000357457 CHRNA2Q15822 529 aa12.57□□□□□ -0.4
COL4A3BP-202ENST00000357457 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
COL4A3BP-202ENST00000357457 NBPF8Q3BBV2 869 aa12.57□□□□□ -0.4
COL4A3BP-202ENST00000357457 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
COL4A3BP-202ENST00000357457 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
COL4A3BP-202ENST00000357457 R3HDM1Q15032 1099 aaKnown RBP12.56□□□□□ -0.4
COL4A3BP-202ENST00000357457 BARGINQ6ZT62 677 aa12.56□□□□□ -0.4
COL4A3BP-202ENST00000357457 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
COL4A3BP-202ENST00000357457 ACEP12821 1306 aa12.55□□□□□ -0.4
COL4A3BP-202ENST00000357457 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
COL4A3BP-202ENST00000357457 TRIM37O94972 964 aa12.54□□□□□ -0.4
COL4A3BP-202ENST00000357457 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
COL4A3BP-202ENST00000357457 PARD3Q8TEW0 1356 aa12.54□□□□□ -0.4
COL4A3BP-202ENST00000357457 EVA1CP58658 441 aa12.53□□□□□ -0.4
COL4A3BP-202ENST00000357457 CPDO75976 1380 aa12.53□□□□□ -0.4
COL4A3BP-202ENST00000357457 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
COL4A3BP-202ENST00000357457 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.4
COL4A3BP-202ENST00000357457 CAMTA1Q9Y6Y1 1673 aa12.52□□□□□ -0.4
COL4A3BP-202ENST00000357457 KIAA1210Q9ULL0 1709 aa12.52□□□□□ -0.41
COL4A3BP-202ENST00000357457 APBA3O96018 575 aa12.52□□□□□ -0.41
COL4A3BP-202ENST00000357457 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
COL4A3BP-202ENST00000357457 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
COL4A3BP-202ENST00000357457 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
COL4A3BP-202ENST00000357457 USP19O94966 1318 aa12.52□□□□□ -0.41
COL4A3BP-202ENST00000357457 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
COL4A3BP-202ENST00000357457 LARP1Q6PKG0 1096 aaKnown RBP12.51□□□□□ -0.41
COL4A3BP-202ENST00000357457 TCP11L2Q8N4U5 519 aa12.51□□□□□ -0.41
COL4A3BP-202ENST00000357457 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
COL4A3BP-202ENST00000357457 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
COL4A3BP-202ENST00000357457 GCP02774 474 aa12.5□□□□□ -0.41
COL4A3BP-202ENST00000357457 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
COL4A3BP-202ENST00000357457 NRKQ7Z2Y5 1582 aa12.49□□□□□ -0.41
COL4A3BP-202ENST00000357457 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
COL4A3BP-202ENST00000357457 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
COL4A3BP-202ENST00000357457 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
COL4A3BP-202ENST00000357457 RREB1Q92766 1687 aa12.48□□□□□ -0.41
COL4A3BP-202ENST00000357457 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
COL4A3BP-202ENST00000357457 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
COL4A3BP-202ENST00000357457 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
COL4A3BP-202ENST00000357457 PARP4Q9UKK3 1724 aaKnown RBP12.46□□□□□ -0.41
COL4A3BP-202ENST00000357457 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
COL4A3BP-202ENST00000357457 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.42
COL4A3BP-202ENST00000357457 UTRNP46939 3433 aa12.46□□□□□ -0.42
COL4A3BP-202ENST00000357457 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
COL4A3BP-202ENST00000357457 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
COL4A3BP-202ENST00000357457 SRPK2P78362 688 aaKnown RBP12.45□□□□□ -0.42
COL4A3BP-202ENST00000357457 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
COL4A3BP-202ENST00000357457 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
COL4A3BP-202ENST00000357457 PLSCR1O15162 318 aa12.44□□□□□ -0.42
COL4A3BP-202ENST00000357457 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
COL4A3BP-202ENST00000357457 CRB1P82279 1406 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms