RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 KTN1Q86UP2 1357 aaKnown RBP22.14■■□□□ 1.13
FDPS-201ENST00000356657 ALS2Q96Q42 1657 aa22.13■■□□□ 1.13
FDPS-201ENST00000356657 A0A1W2PP64 1363 aa22.13■■□□□ 1.13
FDPS-201ENST00000356657 EDC4Q6P2E9 1401 aaKnown RBP22.13■■□□□ 1.13
FDPS-201ENST00000356657 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
FDPS-201ENST00000356657 COL22A1Q8NFW1 1626 aaPredicted RBP22.12■■□□□ 1.13
FDPS-201ENST00000356657 SSH2Q76I76 1423 aa22.11■■□□□ 1.13
FDPS-201ENST00000356657 DDX17Q92841 729 aaKnown RBP22.11■■□□□ 1.13
FDPS-201ENST00000356657 SPATA31A3Q5VYP0 1347 aa22.11■■□□□ 1.13
FDPS-201ENST00000356657 WASHC2AQ641Q2 1341 aa22.11■■□□□ 1.13
FDPS-201ENST00000356657 TTC21AQ8NDW8 1320 aa22.11■■□□□ 1.13
FDPS-201ENST00000356657 POLR3GLQ9BT43 218 aa22.09■■□□□ 1.13
FDPS-201ENST00000356657 XPCQ01831 940 aaPredicted RBP22.07■■□□□ 1.12
FDPS-201ENST00000356657 PNPLA6Q8IY17 1366 aa22.07■■□□□ 1.12
FDPS-201ENST00000356657 USP54Q70EL1 1684 aa22.06■■□□□ 1.12
FDPS-201ENST00000356657 SPATA31A6Q5VVP1 1343 aa22.05■■□□□ 1.12
FDPS-201ENST00000356657 TTC21BQ7Z4L5 1316 aa22.05■■□□□ 1.12
FDPS-201ENST00000356657 PAK3O75914 559 aaPredicted RBP22.04■■□□□ 1.12
FDPS-201ENST00000356657 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
FDPS-201ENST00000356657 MEX3CQ5U5Q3 659 aaKnown RBP22.03■■□□□ 1.12
FDPS-201ENST00000356657 KIF20BQ96Q89 1820 aa22.02■■□□□ 1.12
FDPS-201ENST00000356657 ABTB2Q8N961 1025 aa22.01■■□□□ 1.11
FDPS-201ENST00000356657 CRYBG1Q9Y4K1 1723 aa22■■□□□ 1.11
FDPS-201ENST00000356657 NSD3Q9BZ95 1437 aa22■■□□□ 1.11
FDPS-201ENST00000356657 USP31Q70CQ4 1352 aa22■■□□□ 1.11
FDPS-201ENST00000356657 NUTM2BA6NNL0 878 aaPredicted RBP22■■□□□ 1.11
FDPS-201ENST00000356657 NUTM2EB1AL46 878 aaPredicted RBP22■■□□□ 1.11
FDPS-201ENST00000356657 NLRP13Q86W25 1043 aa22■■□□□ 1.11
FDPS-201ENST00000356657 NUTM2AQ8IVF1 878 aaPredicted RBP22■■□□□ 1.11
FDPS-201ENST00000356657 ABCA3Q99758 1704 aa22■■□□□ 1.11
FDPS-201ENST00000356657 CGNL1Q0VF96 1302 aa21.99■■□□□ 1.11
FDPS-201ENST00000356657 PANK3Q9H999 370 aa21.99■■□□□ 1.11
FDPS-201ENST00000356657 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
FDPS-201ENST00000356657 LMOD2Q6P5Q4 547 aa21.98■■□□□ 1.11
FDPS-201ENST00000356657 LRP6O75581 1613 aa21.98■■□□□ 1.11
FDPS-201ENST00000356657 NSD2O96028 1365 aa21.98■■□□□ 1.11
FDPS-201ENST00000356657 PHRF1Q9P1Y6 1649 aaKnown RBP21.97■■□□□ 1.11
FDPS-201ENST00000356657 USP19O94966 1318 aa21.97■■□□□ 1.11
FDPS-201ENST00000356657 ANKRD26Q9UPS8 1709 aa21.96■■□□□ 1.11
FDPS-201ENST00000356657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.11
FDPS-201ENST00000356657 CARD14Q9BXL6 1004 aa21.96■■□□□ 1.11
FDPS-201ENST00000356657 KNSTRNQ9Y448 316 aa21.96■■□□□ 1.11
FDPS-201ENST00000356657 SLIT3O75094 1523 aa21.96■■□□□ 1.11
FDPS-201ENST00000356657 MARF1Q9Y4F3 1742 aaKnown RBP21.95■■□□□ 1.1
FDPS-201ENST00000356657 OVOS2A0A0J9YW53 1432 aa21.95■■□□□ 1.1
FDPS-201ENST00000356657 OVOS2Q6IE36 1432 aa21.95■■□□□ 1.1
FDPS-201ENST00000356657 NLRP6P59044 892 aa21.95■■□□□ 1.1
FDPS-201ENST00000356657 ILDR2Q71H61 639 aa21.95■■□□□ 1.1
FDPS-201ENST00000356657 NPC1L1Q9UHC9 1359 aa21.93■■□□□ 1.1
FDPS-201ENST00000356657 KCNH5Q8NCM2 988 aa21.92■■□□□ 1.1
FDPS-201ENST00000356657 COG3Q96JB2 828 aa21.91■■□□□ 1.1
FDPS-201ENST00000356657 FYB1O15117 783 aa21.9■■□□□ 1.1
FDPS-201ENST00000356657 HAP1P54257 671 aaPredicted RBP21.9■■□□□ 1.1
FDPS-201ENST00000356657 NME9Q86XW9 330 aa21.9■■□□□ 1.1
FDPS-201ENST00000356657 PER1O15534 1290 aaPredicted RBP21.9■■□□□ 1.1
FDPS-201ENST00000356657 CPDO75976 1380 aa21.88■■□□□ 1.09
FDPS-201ENST00000356657 ADAMTS2O95450 1211 aa21.87■■□□□ 1.09
FDPS-201ENST00000356657 ABCC6O95255 1503 aa21.87■■□□□ 1.09
FDPS-201ENST00000356657 NFAT5O94916 1531 aa21.86■■□□□ 1.09
FDPS-201ENST00000356657 GCP02774 474 aa21.86■■□□□ 1.09
FDPS-201ENST00000356657 NUTM2GQ5VZR2 741 aa21.86■■□□□ 1.09
FDPS-201ENST00000356657 C8orf37Q96NL8 207 aa21.86■■□□□ 1.09
FDPS-201ENST00000356657 RGS17Q9UGC6 210 aaPredicted RBP21.86■■□□□ 1.09
FDPS-201ENST00000356657 AMER1Q5JTC6 1135 aaPredicted RBP21.85■■□□□ 1.09
FDPS-201ENST00000356657 COL14A1Q05707 1796 aaKnown RBP21.85■■□□□ 1.09
FDPS-201ENST00000356657 PLEKHG5O94827 1062 aa21.84■■□□□ 1.09
FDPS-201ENST00000356657 CABLES1Q8TDN4 633 aa21.83■■□□□ 1.09
FDPS-201ENST00000356657 GGNBP2Q9H3C7 697 aa21.83■■□□□ 1.09
FDPS-201ENST00000356657 NWD2Q9ULI1 1742 aa21.83■■□□□ 1.09
FDPS-201ENST00000356657 ZNF772Q68DY9 489 aaPredicted RBP21.83■■□□□ 1.08
FDPS-201ENST00000356657 LTN1O94822 1766 aa21.81■■□□□ 1.08
FDPS-201ENST00000356657 KIF24Q5T7B8 1368 aa21.81■■□□□ 1.08
FDPS-201ENST00000356657 AATKQ6ZMQ8 1374 aa21.81■■□□□ 1.08
FDPS-201ENST00000356657 DDX10Q13206 875 aaKnown RBP21.81■■□□□ 1.08
FDPS-201ENST00000356657 AFF2P51816 1311 aa21.8■■□□□ 1.08
FDPS-201ENST00000356657 NGLY1Q96IV0 654 aa21.8■■□□□ 1.08
FDPS-201ENST00000356657 KIAA0232Q92628 1395 aa21.79■■□□□ 1.08
FDPS-201ENST00000356657 PLCH1Q4KWH8 1693 aa21.79■■□□□ 1.08
FDPS-201ENST00000356657 POTEAQ6S8J7 498 aa21.79■■□□□ 1.08
FDPS-201ENST00000356657 PRDM11Q9NQV5 511 aa21.79■■□□□ 1.08
FDPS-201ENST00000356657 ZRANB1Q9UGI0 708 aa21.79■■□□□ 1.08
FDPS-201ENST00000356657 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.79■■□□□ 1.08
FDPS-201ENST00000356657 RTL1A6NKG5 1358 aa21.78■■□□□ 1.08
FDPS-201ENST00000356657 ARHGEF25Q86VW2 580 aa21.77■■□□□ 1.08
FDPS-201ENST00000356657 LMO7Q8WWI1 1683 aa21.77■■□□□ 1.08
FDPS-201ENST00000356657 SLIT2O94813 1529 aa21.77■■□□□ 1.08
FDPS-201ENST00000356657 MORC1Q86VD1 984 aa21.77■■□□□ 1.07
FDPS-201ENST00000356657 MAP2P11137 1827 aaKnown RBP21.76■■□□□ 1.07
FDPS-201ENST00000356657 COL18A1P39060 1754 aa21.75■■□□□ 1.07
FDPS-201ENST00000356657 ZC3H6P61129 1189 aaKnown RBP21.75■■□□□ 1.07
FDPS-201ENST00000356657 FNBP4Q8N3X1 1017 aaPredicted RBP21.75■■□□□ 1.07
FDPS-201ENST00000356657 BLMP54132 1417 aaPredicted RBP21.74■■□□□ 1.07
FDPS-201ENST00000356657 SMG6Q86US8 1419 aaKnown RBP21.73■■□□□ 1.07
FDPS-201ENST00000356657 SOCS7O14512 581 aa21.73■■□□□ 1.07
FDPS-201ENST00000356657 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
FDPS-201ENST00000356657 NRAPQ86VF7 1730 aa21.72■■□□□ 1.07
FDPS-201ENST00000356657 FAM83GA6ND36 823 aa21.71■■□□□ 1.07
FDPS-201ENST00000356657 SOX12O15370 315 aa21.71■■□□□ 1.07
FDPS-201ENST00000356657 USP21Q9UK80 565 aa21.71■■□□□ 1.07
FDPS-201ENST00000356657 MAP3K19Q56UN5 1328 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms