RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 K7ELQ4 463 aaPredicted RBP22.06■■□□□ 1.12
KDM1A-201ENST00000356634 IPO8O15397 1037 aaKnown RBP22.05■■□□□ 1.12
KDM1A-201ENST00000356634 TPM2P07951 284 aa22.05■■□□□ 1.12
KDM1A-201ENST00000356634 CCDC173Q0VFZ6 552 aa22.05■■□□□ 1.12
KDM1A-201ENST00000356634 NCOA3Q9Y6Q9 1424 aa22.05■■□□□ 1.12
KDM1A-201ENST00000356634 ZCCHC11Q5TAX3 1644 aaKnown RBP22.05■■□□□ 1.12
KDM1A-201ENST00000356634 CT47B1P0C2W7 299 aaPredicted RBP22.04■■□□□ 1.12
KDM1A-201ENST00000356634 RIPK4P57078 832 aa22.04■■□□□ 1.12
KDM1A-201ENST00000356634 RBM10P98175 930 aaKnown RBP22.04■■□□□ 1.12
KDM1A-201ENST00000356634 GAS2L2Q8NHY3 880 aa22.04■■□□□ 1.12
KDM1A-201ENST00000356634 STK26Q9P289 416 aa22.04■■□□□ 1.12
KDM1A-201ENST00000356634 ABCA6Q8N139 1617 aa22.03■■□□□ 1.12
KDM1A-201ENST00000356634 FANCAO15360 1455 aa22.03■■□□□ 1.12
KDM1A-201ENST00000356634 PTMSP20962 102 aa22.03■■□□□ 1.12
KDM1A-201ENST00000356634 NPM1P06748 294 aaKnown RBP eCLIP22.02■■□□□ 1.12
KDM1A-201ENST00000356634 ZSCAN30Q86W11 494 aa22.02■■□□□ 1.12
KDM1A-201ENST00000356634 GGNBP2Q9H3C7 697 aa22.02■■□□□ 1.12
KDM1A-201ENST00000356634 TBC1D9Q6ZT07 1266 aa22.01■■□□□ 1.11
KDM1A-201ENST00000356634 KIF2CQ99661 725 aa22.01■■□□□ 1.11
KDM1A-201ENST00000356634 TRIM35Q9UPQ4 493 aa22.01■■□□□ 1.11
KDM1A-201ENST00000356634 BMP2KLQ5H9B9 411 aa22.01■■□□□ 1.11
KDM1A-201ENST00000356634 CABP2Q9NPB3 220 aa22.01■■□□□ 1.11
KDM1A-201ENST00000356634 KIF16BQ96L93 1317 aa22.01■■□□□ 1.11
KDM1A-201ENST00000356634 MCTP1Q6DN14 999 aa22.01■■□□□ 1.11
KDM1A-201ENST00000356634 NOS1P29475 1434 aa22.01■■□□□ 1.11
KDM1A-201ENST00000356634 MAP3K4Q9Y6R4 1608 aa22■■□□□ 1.11
KDM1A-201ENST00000356634 CAVIN1Q6NZI2 390 aaKnown RBP21.99■■□□□ 1.11
KDM1A-201ENST00000356634 ARID3AQ99856 593 aa21.98■■□□□ 1.11
KDM1A-201ENST00000356634 BAG4O95429 457 aaKnown RBP21.98■■□□□ 1.11
KDM1A-201ENST00000356634 ELL2O00472 640 aaPredicted RBP21.97■■□□□ 1.11
KDM1A-201ENST00000356634 PDCL3Q9H2J4 239 aa21.97■■□□□ 1.11
KDM1A-201ENST00000356634 ADGRL1O94910 1474 aa21.97■■□□□ 1.11
KDM1A-201ENST00000356634 R3HCC1Q9Y3T6 440 aaKnown RBP21.97■■□□□ 1.11
KDM1A-201ENST00000356634 SBNO2Q9Y2G9 1366 aa21.96■■□□□ 1.11
KDM1A-201ENST00000356634 CALD1Q05682 793 aaKnown RBP21.96■■□□□ 1.11
KDM1A-201ENST00000356634 FAM13BQ9NYF5 915 aa21.96■■□□□ 1.11
KDM1A-201ENST00000356634 ABCC1P33527 1531 aa21.96■■□□□ 1.11
KDM1A-201ENST00000356634 KIAA1210Q9ULL0 1709 aa21.96■■□□□ 1.11
KDM1A-201ENST00000356634 KLHL40Q2TBA0 621 aa21.96■■□□□ 1.11
KDM1A-201ENST00000356634 CD109Q6YHK3 1445 aa21.95■■□□□ 1.1
KDM1A-201ENST00000356634 PPP1R9BQ96SB3 815 aa21.94■■□□□ 1.1
KDM1A-201ENST00000356634 MYOM2P54296 1465 aa21.94■■□□□ 1.1
KDM1A-201ENST00000356634 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.93■■□□□ 1.1
KDM1A-201ENST00000356634 PLEKHF1Q96S99 279 aa21.93■■□□□ 1.1
KDM1A-201ENST00000356634 AK9Q5TCS8 1911 aa21.93■■□□□ 1.1
KDM1A-201ENST00000356634 EVC2Q86UK5 1308 aa21.93■■□□□ 1.1
KDM1A-201ENST00000356634 SHROOM2Q13796 1616 aa21.93■■□□□ 1.1
KDM1A-201ENST00000356634 SRPK2P78362 688 aaKnown RBP21.93■■□□□ 1.1
KDM1A-201ENST00000356634 ABCC11Q96J66 1382 aa21.93■■□□□ 1.1
KDM1A-201ENST00000356634 TET3O43151 1660 aa21.92■■□□□ 1.1
KDM1A-201ENST00000356634 OFD1O75665 1012 aa21.92■■□□□ 1.1
KDM1A-201ENST00000356634 ASXL2Q76L83 1435 aa21.91■■□□□ 1.1
KDM1A-201ENST00000356634 XPCQ01831 940 aaPredicted RBP21.91■■□□□ 1.1
KDM1A-201ENST00000356634 GCC1Q96CN9 775 aa21.91■■□□□ 1.1
KDM1A-201ENST00000356634 CDC45O75419 566 aa21.9■■□□□ 1.1
KDM1A-201ENST00000356634 C14orf93Q9H972 538 aaKnown RBP21.9■■□□□ 1.1
KDM1A-201ENST00000356634 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
KDM1A-201ENST00000356634 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.1
KDM1A-201ENST00000356634 PKP1Q13835 747 aa21.89■■□□□ 1.1
KDM1A-201ENST00000356634 ZSCAN23Q3MJ62 389 aa21.89■■□□□ 1.1
KDM1A-201ENST00000356634 FOXD4L5Q5VV16 416 aaPredicted RBP21.89■■□□□ 1.09
KDM1A-201ENST00000356634 FOXD4L4Q8WXT5 416 aaPredicted RBP21.89■■□□□ 1.09
KDM1A-201ENST00000356634 ZFYVE16Q7Z3T8 1539 aa21.89■■□□□ 1.09
KDM1A-201ENST00000356634 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
KDM1A-201ENST00000356634 PRPF40AO75400 957 aaKnown RBP21.88■■□□□ 1.09
KDM1A-201ENST00000356634 APBB1O00213 710 aa21.88■■□□□ 1.09
KDM1A-201ENST00000356634 ZBTB7BO15156 539 aaPredicted RBP21.88■■□□□ 1.09
KDM1A-201ENST00000356634 RBM27Q9P2N5 1060 aaKnown RBP21.88■■□□□ 1.09
KDM1A-201ENST00000356634 ANKRD36BQ8N2N9 1353 aa21.88■■□□□ 1.09
KDM1A-201ENST00000356634 DIAPH1O60610 1272 aaKnown RBP21.87■■□□□ 1.09
KDM1A-201ENST00000356634 RBSNQ9H1K0 784 aa21.87■■□□□ 1.09
KDM1A-201ENST00000356634 KIF1BO60333 1816 aa21.87■■□□□ 1.09
KDM1A-201ENST00000356634 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
KDM1A-201ENST00000356634 ALDH1L2Q3SY69 923 aa21.86■■□□□ 1.09
KDM1A-201ENST00000356634 FBLN1P23142 703 aa21.85■■□□□ 1.09
KDM1A-201ENST00000356634 PRIM1P49642 420 aaKnown RBP21.85■■□□□ 1.09
KDM1A-201ENST00000356634 NUCB2P80303 420 aa21.85■■□□□ 1.09
KDM1A-201ENST00000356634 IL16Q14005 1332 aa21.85■■□□□ 1.09
KDM1A-201ENST00000356634 CHAMP1Q96JM3 812 aa21.85■■□□□ 1.09
KDM1A-201ENST00000356634 QRICH2Q9H0J4 1663 aa21.85■■□□□ 1.09
KDM1A-201ENST00000356634 ATP7AQ04656 1500 aa21.84■■□□□ 1.09
KDM1A-201ENST00000356634 RABEP1Q15276 862 aa21.84■■□□□ 1.09
KDM1A-201ENST00000356634 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
KDM1A-201ENST00000356634 MLECQ14165 292 aa21.83■■□□□ 1.09
KDM1A-201ENST00000356634 SIRT2Q8IXJ6 389 aa21.83■■□□□ 1.09
KDM1A-201ENST00000356634 TSPYL6Q8N831 410 aa21.83■■□□□ 1.09
KDM1A-201ENST00000356634 NSD2O96028 1365 aa21.83■■□□□ 1.09
KDM1A-201ENST00000356634 UQCRHLA0A096LP55 91 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 UQCRHP07919 91 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 GSPT1P15170 499 aaKnown RBP21.82■■□□□ 1.08
KDM1A-201ENST00000356634 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
KDM1A-201ENST00000356634 ADGRB2O60241 1585 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 HMOX1P09601 288 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 ZNF445P59923 1031 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 RNF214Q8ND24 703 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 LMBRD1Q9NUN5 540 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
KDM1A-201ENST00000356634 ZGPATQ8N5A5 531 aaKnown RBP21.82■■□□□ 1.08
KDM1A-201ENST00000356634 A0A1W2PP64 1363 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms