RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 NRKQ7Z2Y5 1582 aa23.21■■□□□ 1.31
PDGFA-201ENST00000354513 ONECUT3O60422 494 aaPredicted RBP23.21■■□□□ 1.31
PDGFA-201ENST00000354513 SEPT12Q8IYM1 358 aa23.21■■□□□ 1.31
PDGFA-201ENST00000354513 TNS1Q9HBL0 1735 aaKnown RBP23.19■■□□□ 1.3
PDGFA-201ENST00000354513 CCDC125Q86Z20 511 aa23.18■■□□□ 1.3
PDGFA-201ENST00000354513 NUDT16Q96DE0 195 aaKnown RBP23.18■■□□□ 1.3
PDGFA-201ENST00000354513 RGPD1P0DJD0 1748 aa23.18■■□□□ 1.3
PDGFA-201ENST00000354513 TRPM1Q7Z4N2 1603 aa23.18■■□□□ 1.3
PDGFA-201ENST00000354513 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
PDGFA-201ENST00000354513 POLR3AO14802 1390 aaPredicted RBP23.17■■□□□ 1.3
PDGFA-201ENST00000354513 LMO7Q8WWI1 1683 aa23.17■■□□□ 1.3
PDGFA-201ENST00000354513 NGDNQ8NEJ9 315 aaKnown RBP23.16■■□□□ 1.3
PDGFA-201ENST00000354513 BTG4Q9NY30 223 aa23.16■■□□□ 1.3
PDGFA-201ENST00000354513 NBPF1Q3BBV0 1214 aa23.15■■□□□ 1.3
PDGFA-201ENST00000354513 CDK19Q9BWU1 502 aa23.14■■□□□ 1.3
PDGFA-201ENST00000354513 CCDC9Q9Y3X0 531 aaKnown RBP23.14■■□□□ 1.3
PDGFA-201ENST00000354513 DEFB132Q7Z7B7 95 aa23.12■■□□□ 1.29
PDGFA-201ENST00000354513 KRT27Q7Z3Y8 459 aa23.11■■□□□ 1.29
PDGFA-201ENST00000354513 PAK3O75914 559 aaPredicted RBP23.1■■□□□ 1.29
PDGFA-201ENST00000354513 FAM98CQ17RN3 349 aaKnown RBP23.1■■□□□ 1.29
PDGFA-201ENST00000354513 SPATA31A5Q5VU36 1347 aa23.1■■□□□ 1.29
PDGFA-201ENST00000354513 SPATA31A7Q8IWB4 1347 aa23.1■■□□□ 1.29
PDGFA-201ENST00000354513 KIAA0232Q92628 1395 aa23.1■■□□□ 1.29
PDGFA-201ENST00000354513 ZRANB1Q9UGI0 708 aa23.09■■□□□ 1.29
PDGFA-201ENST00000354513 ACEP12821 1306 aa23.09■■□□□ 1.29
PDGFA-201ENST00000354513 PLEKHG3A1L390 1219 aa23.08■■□□□ 1.28
PDGFA-201ENST00000354513 CAMTA1Q9Y6Y1 1673 aa23.07■■□□□ 1.28
PDGFA-201ENST00000354513 AKAP12Q02952 1782 aa23.07■■□□□ 1.28
PDGFA-201ENST00000354513 PIK3C2AO00443 1686 aa23.07■■□□□ 1.28
PDGFA-201ENST00000354513 LRP5O75197 1615 aa23.07■■□□□ 1.28
PDGFA-201ENST00000354513 PPIP5K1Q6PFW1 1433 aa23.06■■□□□ 1.28
PDGFA-201ENST00000354513 NBPF8Q3BBV2 869 aa23.06■■□□□ 1.28
PDGFA-201ENST00000354513 PRDM11Q9NQV5 511 aa23.06■■□□□ 1.28
PDGFA-201ENST00000354513 CCDC61Q9Y6R9 512 aa23.06■■□□□ 1.28
PDGFA-201ENST00000354513 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
PDGFA-201ENST00000354513 NUTM2GQ5VZR2 741 aa23.05■■□□□ 1.28
PDGFA-201ENST00000354513 WNK3Q9BYP7 1800 aa23.04■■□□□ 1.28
PDGFA-201ENST00000354513 USP19O94966 1318 aa23.04■■□□□ 1.28
PDGFA-201ENST00000354513 SPATA31A1Q5TZJ5 1347 aa23.03■■□□□ 1.28
PDGFA-201ENST00000354513 CENPJQ9HC77 1338 aaPredicted RBP23.03■■□□□ 1.28
PDGFA-201ENST00000354513 COL18A1P39060 1754 aa23.02■■□□□ 1.28
PDGFA-201ENST00000354513 FAM182BQ5T319 152 aa23.02■■□□□ 1.28
PDGFA-201ENST00000354513 SLIT3O75094 1523 aa23.02■■□□□ 1.28
PDGFA-201ENST00000354513 PARP4Q9UKK3 1724 aaKnown RBP23.02■■□□□ 1.27
PDGFA-201ENST00000354513 SSH2Q76I76 1423 aa23.01■■□□□ 1.27
PDGFA-201ENST00000354513 A0A0G2JS52 829 aa23.01■■□□□ 1.27
PDGFA-201ENST00000354513 MYT1Q01538 1121 aa23.01■■□□□ 1.27
PDGFA-201ENST00000354513 RREB1Q92766 1687 aa23.01■■□□□ 1.27
PDGFA-201ENST00000354513 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
PDGFA-201ENST00000354513 L3MBTL2Q969R5 705 aa23■■□□□ 1.27
PDGFA-201ENST00000354513 CPDO75976 1380 aa22.99■■□□□ 1.27
PDGFA-201ENST00000354513 RGPD5Q99666 1765 aa22.99■■□□□ 1.27
PDGFA-201ENST00000354513 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
PDGFA-201ENST00000354513 DISP2A7MBM2 1401 aa22.98■■□□□ 1.27
PDGFA-201ENST00000354513 USP6P35125 1406 aa22.98■■□□□ 1.27
PDGFA-201ENST00000354513 SF3B2Q13435 895 aaKnown RBP22.97■■□□□ 1.27
PDGFA-201ENST00000354513 SIN3AQ96ST3 1273 aa22.97■■□□□ 1.27
PDGFA-201ENST00000354513 SRPK2P78362 688 aaKnown RBP22.96■■□□□ 1.27
PDGFA-201ENST00000354513 NUP188Q5SRE5 1749 aa22.96■■□□□ 1.27
PDGFA-201ENST00000354513 MON2Q7Z3U7 1717 aa22.96■■□□□ 1.27
PDGFA-201ENST00000354513 COL5A2P05997 1499 aaPredicted RBP22.96■■□□□ 1.27
PDGFA-201ENST00000354513 PEAK1Q9H792 1746 aa22.95■■□□□ 1.26
PDGFA-201ENST00000354513 STRN4Q9NRL3 753 aa22.95■■□□□ 1.26
PDGFA-201ENST00000354513 LRRC37A3O60309 1634 aa22.94■■□□□ 1.26
PDGFA-201ENST00000354513 ABTB2Q8N961 1025 aa22.94■■□□□ 1.26
PDGFA-201ENST00000354513 SBF2Q86WG5 1849 aa22.94■■□□□ 1.26
PDGFA-201ENST00000354513 BRD4O60885 1362 aaPredicted RBP22.92■■□□□ 1.26
PDGFA-201ENST00000354513 BAG6P46379 1132 aa22.92■■□□□ 1.26
PDGFA-201ENST00000354513 USP54Q70EL1 1684 aa22.91■■□□□ 1.26
PDGFA-201ENST00000354513 EN1Q05925 392 aaPredicted RBP22.9■■□□□ 1.26
PDGFA-201ENST00000354513 LARP1Q6PKG0 1096 aaKnown RBP22.9■■□□□ 1.26
PDGFA-201ENST00000354513 BARGINQ6ZT62 677 aa22.89■■□□□ 1.26
PDGFA-201ENST00000354513 CABP1Q9NZU7 370 aa22.89■■□□□ 1.26
PDGFA-201ENST00000354513 GCP02774 474 aa22.88■■□□□ 1.25
PDGFA-201ENST00000354513 PSDA5PKW4 1024 aaPredicted RBP22.87■■□□□ 1.25
PDGFA-201ENST00000354513 NLRP13Q86W25 1043 aa22.87■■□□□ 1.25
PDGFA-201ENST00000354513 USP35Q9P2H5 1018 aa22.87■■□□□ 1.25
PDGFA-201ENST00000354513 ROCK2O75116 1388 aaKnown RBP22.86■■□□□ 1.25
PDGFA-201ENST00000354513 NFAT5O94916 1531 aa22.86■■□□□ 1.25
PDGFA-201ENST00000354513 RGPD3A6NKT7 1758 aaPredicted RBP22.85■■□□□ 1.25
PDGFA-201ENST00000354513 RGPD4Q7Z3J3 1758 aa22.85■■□□□ 1.25
PDGFA-201ENST00000354513 CRB1P82279 1406 aa22.84■■□□□ 1.25
PDGFA-201ENST00000354513 EVA1CP58658 441 aa22.83■■□□□ 1.25
PDGFA-201ENST00000354513 EZH2Q15910 746 aaKnown RBP22.83■■□□□ 1.25
PDGFA-201ENST00000354513 EVC2Q86UK5 1308 aa22.83■■□□□ 1.25
PDGFA-201ENST00000354513 CPSF1Q10570 1443 aaKnown RBP22.83■■□□□ 1.25
PDGFA-201ENST00000354513 TRIM37O94972 964 aa22.82■■□□□ 1.24
PDGFA-201ENST00000354513 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
PDGFA-201ENST00000354513 FAM196AQ6ZSG2 479 aa22.82■■□□□ 1.24
PDGFA-201ENST00000354513 TCP11L2Q8N4U5 519 aa22.82■■□□□ 1.24
PDGFA-201ENST00000354513 AATKQ6ZMQ8 1374 aa22.82■■□□□ 1.24
PDGFA-201ENST00000354513 LTN1O94822 1766 aa22.82■■□□□ 1.24
PDGFA-201ENST00000354513 CAMKK2Q96RR4 588 aa22.82■■□□□ 1.24
PDGFA-201ENST00000354513 NLRP6P59044 892 aa22.81■■□□□ 1.24
PDGFA-201ENST00000354513 CD163L1Q9NR16 1453 aa22.8■■□□□ 1.24
PDGFA-201ENST00000354513 SBNO2Q9Y2G9 1366 aa22.79■■□□□ 1.24
PDGFA-201ENST00000354513 TTC21BQ7Z4L5 1316 aa22.79■■□□□ 1.24
PDGFA-201ENST00000354513 THRAP3Q9Y2W1 955 aaKnown RBP22.79■■□□□ 1.24
PDGFA-201ENST00000354513 ABCC6O95255 1503 aa22.77■■□□□ 1.24
PDGFA-201ENST00000354513 R3HDM1Q15032 1099 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms