RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
RPE-201ENST00000354506 TBC1D32Q96NH3 1257 aa12.24□□□□□ -0.45
RPE-201ENST00000354506 PREX1Q8TCU6 1659 aa12.24□□□□□ -0.45
RPE-201ENST00000354506 CDC42BPGQ6DT37 1551 aa12.24□□□□□ -0.45
RPE-201ENST00000354506 MFAP1P55081 439 aaKnown RBP12.24□□□□□ -0.45
RPE-201ENST00000354506 TSR2Q969E8 191 aaKnown RBP12.24□□□□□ -0.45
RPE-201ENST00000354506 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
RPE-201ENST00000354506 IL16Q14005 1332 aa12.23□□□□□ -0.45
RPE-201ENST00000354506 FYB1O15117 783 aa12.23□□□□□ -0.45
RPE-201ENST00000354506 U2AF1L5P0DN76 240 aaPredicted RBP12.23□□□□□ -0.45
RPE-201ENST00000354506 TMPOP42166 694 aaKnown RBP12.23□□□□□ -0.45
RPE-201ENST00000354506 U2AF1Q01081 240 aaKnown RBP eCLIP12.23□□□□□ -0.45
RPE-201ENST00000354506 SLC52A1Q9NWF4 448 aa12.23□□□□□ -0.45
RPE-201ENST00000354506 HDAC1Q13547 482 aaPredicted RBP12.22□□□□□ -0.45
RPE-201ENST00000354506 ZKSCAN2Q63HK3 967 aa12.22□□□□□ -0.45
RPE-201ENST00000354506 RAPGEF3O95398 923 aa12.22□□□□□ -0.45
RPE-201ENST00000354506 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
RPE-201ENST00000354506 PANK2Q9BZ23 570 aa12.22□□□□□ -0.45
RPE-201ENST00000354506 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.45
RPE-201ENST00000354506 DZIP1LQ8IYY4 767 aaKnown RBP12.21□□□□□ -0.45
RPE-201ENST00000354506 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.46
RPE-201ENST00000354506 KIF20BQ96Q89 1820 aa12.2□□□□□ -0.46
RPE-201ENST00000354506 TRIM27P14373 513 aa12.2□□□□□ -0.46
RPE-201ENST00000354506 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
RPE-201ENST00000354506 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
RPE-201ENST00000354506 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
RPE-201ENST00000354506 EXOSC9Q06265 439 aaKnown RBP12.19□□□□□ -0.46
RPE-201ENST00000354506 SSH1Q8WYL5 1049 aa12.19□□□□□ -0.46
RPE-201ENST00000354506 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
RPE-201ENST00000354506 GGNBP2Q9H3C7 697 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 FBLN1P23142 703 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 BECN1Q14457 450 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 PPIP5K1Q6PFW1 1433 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 YEATS2Q9ULM3 1422 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 RRAGDQ9NQL2 400 aaPredicted RBP12.18□□□□□ -0.46
RPE-201ENST00000354506 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
RPE-201ENST00000354506 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
RPE-201ENST00000354506 STK26Q9P289 416 aa12.17□□□□□ -0.46
RPE-201ENST00000354506 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
RPE-201ENST00000354506 FTSJ3Q8IY81 847 aaKnown RBP12.16□□□□□ -0.46
RPE-201ENST00000354506 NOB1Q9ULX3 412 aaKnown RBP12.16□□□□□ -0.46
RPE-201ENST00000354506 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
RPE-201ENST00000354506 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
RPE-201ENST00000354506 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
RPE-201ENST00000354506 UPF2Q9HAU5 1272 aaKnown RBP12.16□□□□□ -0.46
RPE-201ENST00000354506 TERF2IPQ9NYB0 399 aa12.16□□□□□ -0.46
RPE-201ENST00000354506 FAM135BQ49AJ0 1406 aa12.16□□□□□ -0.46
RPE-201ENST00000354506 SRPK2P78362 688 aaKnown RBP12.15□□□□□ -0.46
RPE-201ENST00000354506 ITPRIPQ8IWB1 547 aa12.15□□□□□ -0.46
RPE-201ENST00000354506 SMC4Q9NTJ3 1288 aa12.15□□□□□ -0.46
RPE-201ENST00000354506 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
RPE-201ENST00000354506 ALDH1L2Q3SY69 923 aa12.15□□□□□ -0.46
RPE-201ENST00000354506 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
RPE-201ENST00000354506 FCHSD2O94868 740 aa12.14□□□□□ -0.47
RPE-201ENST00000354506 RIPK4P57078 832 aa12.14□□□□□ -0.47
RPE-201ENST00000354506 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
RPE-201ENST00000354506 TMEM57Q8N5G2 664 aa12.14□□□□□ -0.47
RPE-201ENST00000354506 CDK19Q9BWU1 502 aa12.13□□□□□ -0.47
RPE-201ENST00000354506 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
RPE-201ENST00000354506 RIMBP3CA6NJZ7 1639 aa12.13□□□□□ -0.47
RPE-201ENST00000354506 RIMBP3BA6NNM3 1639 aa12.13□□□□□ -0.47
RPE-201ENST00000354506 RIMBP3Q9UFD9 1639 aa12.13□□□□□ -0.47
RPE-201ENST00000354506 NAP1L5Q96NT1 182 aaPredicted RBP12.13□□□□□ -0.47
RPE-201ENST00000354506 PNNQ9H307 717 aaKnown RBP12.13□□□□□ -0.47
RPE-201ENST00000354506 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
RPE-201ENST00000354506 ATP7BP35670 1465 aa12.13□□□□□ -0.47
RPE-201ENST00000354506 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
RPE-201ENST00000354506 NUCB1Q02818 461 aa12.12□□□□□ -0.47
RPE-201ENST00000354506 MINK1Q8N4C8 1332 aaPredicted RBP12.12□□□□□ -0.47
RPE-201ENST00000354506 MAP2P11137 1827 aaKnown RBP12.12□□□□□ -0.47
RPE-201ENST00000354506 ZNF428Q96B54 188 aa12.12□□□□□ -0.47
RPE-201ENST00000354506 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
RPE-201ENST00000354506 LNPKQ9C0E8 428 aa12.12□□□□□ -0.47
RPE-201ENST00000354506 REREQ9P2R6 1566 aa12.11□□□□□ -0.47
RPE-201ENST00000354506 DDIT3P35638 169 aa12.11□□□□□ -0.47
RPE-201ENST00000354506 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
RPE-201ENST00000354506 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
RPE-201ENST00000354506 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
RPE-201ENST00000354506 CPSF1Q10570 1443 aaKnown RBP12.11□□□□□ -0.47
RPE-201ENST00000354506 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
RPE-201ENST00000354506 ZNF692Q9BU19 519 aaPredicted RBP12.1□□□□□ -0.47
RPE-201ENST00000354506 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
RPE-201ENST00000354506 HDGFL2Q7Z4V5 671 aaPredicted RBP12.1□□□□□ -0.47
RPE-201ENST00000354506 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
RPE-201ENST00000354506 IPO8O15397 1037 aaKnown RBP12.1□□□□□ -0.47
RPE-201ENST00000354506 ZNF853P0CG23 659 aa12.1□□□□□ -0.47
RPE-201ENST00000354506 XRCC6P12956 609 aaKnown RBP eCLIP12.1□□□□□ -0.47
RPE-201ENST00000354506 FBXO31Q5XUX0 539 aaPredicted RBP12.1□□□□□ -0.47
RPE-201ENST00000354506 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
RPE-201ENST00000354506 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
RPE-201ENST00000354506 VAMP4O75379 141 aa12.09□□□□□ -0.47
RPE-201ENST00000354506 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
RPE-201ENST00000354506 SPATA31D1Q6ZQQ2 1576 aa12.09□□□□□ -0.47
RPE-201ENST00000354506 NRXN3Q9Y4C0 1643 aa12.09□□□□□ -0.47
RPE-201ENST00000354506 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
RPE-201ENST00000354506 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
RPE-201ENST00000354506 APBB1O00213 710 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms