RNA–Protein interactions for RNA: ENST00000352127.11

XRCC3-201, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-201ENST00000352127 FRAT2O75474 233 aaPredicted RBP22.68■■□□□ 1.22
XRCC3-201ENST00000352127 SSH1Q8WYL5 1049 aa22.68■■□□□ 1.22
XRCC3-201ENST00000352127 PREX1Q8TCU6 1659 aa22.67■■□□□ 1.22
XRCC3-201ENST00000352127 MVPQ14764 893 aaKnown RBP22.67■■□□□ 1.22
XRCC3-201ENST00000352127 ZKSCAN2Q63HK3 967 aa22.67■■□□□ 1.22
XRCC3-201ENST00000352127 IL27Q8NEV9 243 aa22.67■■□□□ 1.22
XRCC3-201ENST00000352127 TERF2IPQ9NYB0 399 aa22.67■■□□□ 1.22
XRCC3-201ENST00000352127 VIRMAQ69YN4 1812 aaKnown RBP22.66■■□□□ 1.22
XRCC3-201ENST00000352127 COL3A1P02461 1466 aaPredicted RBP22.66■■□□□ 1.22
XRCC3-201ENST00000352127 RIPK4P57078 832 aa22.66■■□□□ 1.22
XRCC3-201ENST00000352127 DZIP1LQ8IYY4 767 aaKnown RBP22.66■■□□□ 1.22
XRCC3-201ENST00000352127 TRIM27P14373 513 aa22.66■■□□□ 1.22
XRCC3-201ENST00000352127 MLECQ14165 292 aa22.64■■□□□ 1.22
XRCC3-201ENST00000352127 ZFYVE9O95405 1425 aa22.64■■□□□ 1.21
XRCC3-201ENST00000352127 NLRP1Q9C000 1473 aa22.64■■□□□ 1.21
XRCC3-201ENST00000352127 ATAD2Q6PL18 1390 aa22.63■■□□□ 1.21
XRCC3-201ENST00000352127 DIAPH1O60610 1272 aaKnown RBP22.63■■□□□ 1.21
XRCC3-201ENST00000352127 ITPRIPQ8IWB1 547 aa22.63■■□□□ 1.21
XRCC3-201ENST00000352127 RWDD1Q9H446 243 aaPredicted RBP22.62■■□□□ 1.21
XRCC3-201ENST00000352127 NOB1Q9ULX3 412 aaKnown RBP22.62■■□□□ 1.21
XRCC3-201ENST00000352127 HDGFL2Q7Z4V5 671 aaPredicted RBP22.61■■□□□ 1.21
XRCC3-201ENST00000352127 SLKQ9H2G2 1235 aaPredicted RBP22.61■■□□□ 1.21
XRCC3-201ENST00000352127 RTN4Q9NQC3 1192 aaKnown RBP22.61■■□□□ 1.21
XRCC3-201ENST00000352127 THUMPD2Q9BTF0 503 aaKnown RBP22.6■■□□□ 1.21
XRCC3-201ENST00000352127 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
XRCC3-201ENST00000352127 HMOX1P09601 288 aa22.6■■□□□ 1.21
XRCC3-201ENST00000352127 FAM69CQ0P6D2 419 aa22.58■■□□□ 1.21
XRCC3-201ENST00000352127 ZRANB1Q9UGI0 708 aa22.58■■□□□ 1.21
XRCC3-201ENST00000352127 GSE1Q14687 1217 aa22.58■■□□□ 1.21
XRCC3-201ENST00000352127 TMEM57Q8N5G2 664 aa22.58■■□□□ 1.21
XRCC3-201ENST00000352127 PRKAR2BP31323 418 aa22.57■■□□□ 1.2
XRCC3-201ENST00000352127 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
XRCC3-201ENST00000352127 ATF7IPQ6VMQ6 1270 aa22.56■■□□□ 1.2
XRCC3-201ENST00000352127 PHACTR3Q96KR7 559 aa22.56■■□□□ 1.2
XRCC3-201ENST00000352127 ARHGEF40Q8TER5 1519 aa22.56■■□□□ 1.2
XRCC3-201ENST00000352127 POLKQ9UBT6 870 aa22.55■■□□□ 1.2
XRCC3-201ENST00000352127 EMILIN1Q9Y6C2 1016 aa22.55■■□□□ 1.2
XRCC3-201ENST00000352127 TSPOAP1O95153 1857 aa22.55■■□□□ 1.2
XRCC3-201ENST00000352127 SPRYD3Q8NCJ5 442 aa22.54■■□□□ 1.2
XRCC3-201ENST00000352127 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
XRCC3-201ENST00000352127 AAMPQ13685 434 aa22.53■■□□□ 1.2
XRCC3-201ENST00000352127 ELL2O00472 640 aaPredicted RBP22.52■■□□□ 1.2
XRCC3-201ENST00000352127 BRPF3Q9ULD4 1205 aa22.52■■□□□ 1.2
XRCC3-201ENST00000352127 CLTCQ00610 1675 aaKnown RBP22.52■■□□□ 1.2
XRCC3-201ENST00000352127 LRRC7Q96NW7 1537 aa22.52■■□□□ 1.2
XRCC3-201ENST00000352127 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
XRCC3-201ENST00000352127 NME9Q86XW9 330 aa22.51■■□□□ 1.19
XRCC3-201ENST00000352127 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
XRCC3-201ENST00000352127 PNPLA6Q8IY17 1366 aa22.51■■□□□ 1.19
XRCC3-201ENST00000352127 TBC1D32Q96NH3 1257 aa22.51■■□□□ 1.19
XRCC3-201ENST00000352127 CT47B1P0C2W7 299 aaPredicted RBP22.5■■□□□ 1.19
XRCC3-201ENST00000352127 DDX19BQ9UMR2 479 aa22.5■■□□□ 1.19
XRCC3-201ENST00000352127 MFAP1P55081 439 aaKnown RBP22.49■■□□□ 1.19
XRCC3-201ENST00000352127 KIF20BQ96Q89 1820 aa22.49■■□□□ 1.19
XRCC3-201ENST00000352127 MED14O60244 1454 aa22.49■■□□□ 1.19
XRCC3-201ENST00000352127 TXNDC2Q86VQ3 553 aa22.48■■□□□ 1.19
XRCC3-201ENST00000352127 UPF2Q9HAU5 1272 aaKnown RBP22.48■■□□□ 1.19
XRCC3-201ENST00000352127 TSPYL6Q8N831 410 aa22.48■■□□□ 1.19
XRCC3-201ENST00000352127 TBC1D2Q9BYX2 928 aa22.48■■□□□ 1.19
XRCC3-201ENST00000352127 IL16Q14005 1332 aa22.47■■□□□ 1.19
XRCC3-201ENST00000352127 FCHSD2O94868 740 aa22.47■■□□□ 1.19
XRCC3-201ENST00000352127 BECN1Q14457 450 aa22.47■■□□□ 1.19
XRCC3-201ENST00000352127 C1orf115Q9H7X2 142 aa22.47■■□□□ 1.19
XRCC3-201ENST00000352127 RRS1Q15050 365 aaKnown RBP22.46■■□□□ 1.19
XRCC3-201ENST00000352127 ZBTB40Q9NUA8 1239 aa22.46■■□□□ 1.19
XRCC3-201ENST00000352127 MAP2P11137 1827 aaKnown RBP22.46■■□□□ 1.19
XRCC3-201ENST00000352127 A2ML1A8K2U0 1454 aa22.46■■□□□ 1.19
XRCC3-201ENST00000352127 RIMS2Q9UQ26 1411 aa22.46■■□□□ 1.19
XRCC3-201ENST00000352127 HDAC1Q13547 482 aaPredicted RBP22.45■■□□□ 1.18
XRCC3-201ENST00000352127 LNPKQ9C0E8 428 aa22.45■■□□□ 1.18
XRCC3-201ENST00000352127 FAM135BQ49AJ0 1406 aa22.44■■□□□ 1.18
XRCC3-201ENST00000352127 METP08581 1390 aa22.43■■□□□ 1.18
XRCC3-201ENST00000352127 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
XRCC3-201ENST00000352127 DCTN1Q14203 1278 aa22.42■■□□□ 1.18
XRCC3-201ENST00000352127 KIF16BQ96L93 1317 aa22.42■■□□□ 1.18
XRCC3-201ENST00000352127 NFE2L2Q16236 605 aa22.42■■□□□ 1.18
XRCC3-201ENST00000352127 SMC5Q8IY18 1101 aa22.42■■□□□ 1.18
XRCC3-201ENST00000352127 PPIP5K1Q6PFW1 1433 aa22.41■■□□□ 1.18
XRCC3-201ENST00000352127 ANTXR1Q9H6X2 564 aa22.41■■□□□ 1.18
XRCC3-201ENST00000352127 NUTM2FA1L443 756 aa22.41■■□□□ 1.18
XRCC3-201ENST00000352127 WASLO00401 505 aaPredicted RBP22.41■■□□□ 1.18
XRCC3-201ENST00000352127 PNNQ9H307 717 aaKnown RBP22.41■■□□□ 1.18
XRCC3-201ENST00000352127 C22orf23Q9BZE7 217 aa22.4■■□□□ 1.18
XRCC3-201ENST00000352127 IPO8O15397 1037 aaKnown RBP22.4■■□□□ 1.18
XRCC3-201ENST00000352127 IL13P35225 146 aa22.4■■□□□ 1.18
XRCC3-201ENST00000352127 VAMP4O75379 141 aa22.39■■□□□ 1.17
XRCC3-201ENST00000352127 MBIPQ9NS73 344 aa22.39■■□□□ 1.17
XRCC3-201ENST00000352127 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.17
XRCC3-201ENST00000352127 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.17
XRCC3-201ENST00000352127 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.17
XRCC3-201ENST00000352127 NUDT16Q96DE0 195 aaKnown RBP22.38■■□□□ 1.17
XRCC3-201ENST00000352127 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
XRCC3-201ENST00000352127 ALDH1L2Q3SY69 923 aa22.37■■□□□ 1.17
XRCC3-201ENST00000352127 ATP7BP35670 1465 aa22.37■■□□□ 1.17
XRCC3-201ENST00000352127 CPS1P31327 1500 aa22.36■■□□□ 1.17
XRCC3-201ENST00000352127 MRPL50Q8N5N7 158 aaKnown RBP22.36■■□□□ 1.17
XRCC3-201ENST00000352127 C8orf58Q8NAV2 365 aa22.36■■□□□ 1.17
XRCC3-201ENST00000352127 ZMYM3Q14202 1370 aa22.36■■□□□ 1.17
XRCC3-201ENST00000352127 CDC42BPGQ6DT37 1551 aa22.35■■□□□ 1.17
XRCC3-201ENST00000352127 DIP2BQ9P265 1576 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms