RNA–Protein interactions for RNA: ENST00000350771.7

H2AFV-204, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-204ENST00000350771 CABP1Q9NZU7 370 aa36.47■■■■□ 3.43
H2AFV-204ENST00000350771 BRD4O60885 1362 aaPredicted RBP36.43■■■■□ 3.42
H2AFV-204ENST00000350771 QTRT2Q9H974 415 aaKnown RBP36.43■■■■□ 3.42
H2AFV-204ENST00000350771 AKAP12Q02952 1782 aa36.43■■■■□ 3.42
H2AFV-204ENST00000350771 ABCA3Q99758 1704 aa36.42■■■■□ 3.42
H2AFV-204ENST00000350771 RBM6P78332 1123 aaKnown RBP36.41■■■■□ 3.42
H2AFV-204ENST00000350771 MARF1Q9Y4F3 1742 aaKnown RBP36.39■■■■□ 3.42
H2AFV-204ENST00000350771 USP6P35125 1406 aa36.39■■■■□ 3.42
H2AFV-204ENST00000350771 CPSF1Q10570 1443 aaKnown RBP36.39■■■■□ 3.42
H2AFV-204ENST00000350771 SSH2Q76I76 1423 aa36.38■■■■□ 3.41
H2AFV-204ENST00000350771 CRYBG1Q9Y4K1 1723 aa36.38■■■■□ 3.41
H2AFV-204ENST00000350771 CD163L1Q9NR16 1453 aa36.35■■■■□ 3.41
H2AFV-204ENST00000350771 TMF1P82094 1093 aa36.34■■■■□ 3.41
H2AFV-204ENST00000350771 FNBP4Q8N3X1 1017 aaPredicted RBP36.34■■■■□ 3.41
H2AFV-204ENST00000350771 USP21Q9UK80 565 aa36.34■■■■□ 3.41
H2AFV-204ENST00000350771 NINLQ9Y2I6 1382 aa36.33■■■■□ 3.41
H2AFV-204ENST00000350771 ZNF692Q9BU19 519 aaPredicted RBP36.33■■■■□ 3.41
H2AFV-204ENST00000350771 MON2Q7Z3U7 1717 aa36.33■■■■□ 3.41
H2AFV-204ENST00000350771 NRKQ7Z2Y5 1582 aa36.32■■■■□ 3.41
H2AFV-204ENST00000350771 PAK3O75914 559 aaPredicted RBP36.32■■■■□ 3.4
H2AFV-204ENST00000350771 EIF4G2P78344 907 aaKnown RBP eCLIP36.31■■■■□ 3.4
H2AFV-204ENST00000350771 LMOD2Q6P5Q4 547 aa36.31■■■■□ 3.4
H2AFV-204ENST00000350771 TRPC5Q9UL62 973 aaPredicted RBP36.3■■■■□ 3.4
H2AFV-204ENST00000350771 UPF1Q92900 1129 aaKnown RBP eCLIP36.29■■■■□ 3.4
H2AFV-204ENST00000350771 CABLES1Q8TDN4 633 aa36.27■■■■□ 3.4
H2AFV-204ENST00000350771 RGS12O14924 1447 aa36.25■■■■□ 3.39
H2AFV-204ENST00000350771 HSPA5P11021 654 aaKnown RBP36.25■■■■□ 3.39
H2AFV-204ENST00000350771 CDCA8Q53HL2 280 aa36.25■■■■□ 3.39
H2AFV-204ENST00000350771 SLC12A5Q9H2X9 1139 aa36.25■■■■□ 3.39
H2AFV-204ENST00000350771 PHRF1Q9P1Y6 1649 aaKnown RBP36.25■■■■□ 3.39
H2AFV-204ENST00000350771 PIK3C2AO00443 1686 aa36.24■■■■□ 3.39
H2AFV-204ENST00000350771 KTN1Q86UP2 1357 aaKnown RBP36.24■■■■□ 3.39
H2AFV-204ENST00000350771 TMC1Q8TDI8 760 aa36.22■■■■□ 3.39
H2AFV-204ENST00000350771 ATRNO75882 1429 aa36.21■■■■□ 3.39
H2AFV-204ENST00000350771 USP19O94966 1318 aa36.21■■■■□ 3.39
H2AFV-204ENST00000350771 ABTB2Q8N961 1025 aa36.21■■■■□ 3.39
H2AFV-204ENST00000350771 A0A1W2PP64 1363 aa36.2■■■■□ 3.39
H2AFV-204ENST00000350771 TTC21BQ7Z4L5 1316 aa36.2■■■■□ 3.39
H2AFV-204ENST00000350771 TTC21AQ8NDW8 1320 aa36.19■■■■□ 3.38
H2AFV-204ENST00000350771 MYOM1P52179 1685 aa36.19■■■■□ 3.38
H2AFV-204ENST00000350771 TERF2IPQ9NYB0 399 aa36.18■■■■□ 3.38
H2AFV-204ENST00000350771 SLIT2O94813 1529 aa36.18■■■■□ 3.38
H2AFV-204ENST00000350771 HDGFL2Q7Z4V5 671 aaPredicted RBP36.17■■■■□ 3.38
H2AFV-204ENST00000350771 BCL9LQ86UU0 1499 aa36.17■■■■□ 3.38
H2AFV-204ENST00000350771 HAP1P54257 671 aaPredicted RBP36.16■■■■□ 3.38
H2AFV-204ENST00000350771 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.16■■■■□ 3.38
H2AFV-204ENST00000350771 EDC4Q6P2E9 1401 aaKnown RBP36.16■■■■□ 3.38
H2AFV-204ENST00000350771 USP54Q70EL1 1684 aa36.15■■■■□ 3.38
H2AFV-204ENST00000350771 ANKRD36BQ8N2N9 1353 aa36.15■■■■□ 3.38
H2AFV-204ENST00000350771 SLIT3O75094 1523 aa36.14■■■■□ 3.38
H2AFV-204ENST00000350771 NUTM2GQ5VZR2 741 aa36.14■■■■□ 3.38
H2AFV-204ENST00000350771 NLRP13Q86W25 1043 aa36.14■■■■□ 3.38
H2AFV-204ENST00000350771 NWD2Q9ULI1 1742 aa36.14■■■■□ 3.38
H2AFV-204ENST00000350771 PLCH1Q4KWH8 1693 aa36.13■■■■□ 3.37
H2AFV-204ENST00000350771 COL14A1Q05707 1796 aaKnown RBP36.11■■■■□ 3.37
H2AFV-204ENST00000350771 PLEKHG5O94827 1062 aa36.1■■■■□ 3.37
H2AFV-204ENST00000350771 USP31Q70CQ4 1352 aa36.08■■■■□ 3.37
H2AFV-204ENST00000350771 UNC5CLQ8IV45 518 aa36.08■■■■□ 3.37
H2AFV-204ENST00000350771 FAM83GA6ND36 823 aa36.07■■■■□ 3.36
H2AFV-204ENST00000350771 NLRP6P59044 892 aa36.07■■■■□ 3.36
H2AFV-204ENST00000350771 GJD4Q96KN9 370 aaPredicted RBP36.07■■■■□ 3.36
H2AFV-204ENST00000350771 CPDO75976 1380 aa36.06■■■■□ 3.36
H2AFV-204ENST00000350771 GCP02774 474 aa36.04■■■■□ 3.36
H2AFV-204ENST00000350771 NRAPQ86VF7 1730 aa36.04■■■■□ 3.36
H2AFV-204ENST00000350771 KIAA0232Q92628 1395 aa36.03■■■■□ 3.36
H2AFV-204ENST00000350771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.01■■■■□ 3.36
H2AFV-204ENST00000350771 PRDM11Q9NQV5 511 aa35.99■■■■□ 3.35
H2AFV-204ENST00000350771 LMO7Q8WWI1 1683 aa35.98■■■■□ 3.35
H2AFV-204ENST00000350771 C11orf95C9JLR9 678 aaPredicted RBP35.98■■■■□ 3.35
H2AFV-204ENST00000350771 NME9Q86XW9 330 aa35.98■■■■□ 3.35
H2AFV-204ENST00000350771 OVOS2A0A0J9YW53 1432 aa35.98■■■■□ 3.35
H2AFV-204ENST00000350771 OVOS2Q6IE36 1432 aa35.98■■■■□ 3.35
H2AFV-204ENST00000350771 NFAT5O94916 1531 aa35.98■■■■□ 3.35
H2AFV-204ENST00000350771 ZC3H6P61129 1189 aaKnown RBP35.96■■■■□ 3.35
H2AFV-204ENST00000350771 KCNH5Q8NCM2 988 aa35.94■■■■□ 3.34
H2AFV-204ENST00000350771 ZRANB1Q9UGI0 708 aa35.94■■■■□ 3.34
H2AFV-204ENST00000350771 GLI3P10071 1580 aa35.93■■■■□ 3.34
H2AFV-204ENST00000350771 BTG4Q9NY30 223 aa35.92■■■■□ 3.34
H2AFV-204ENST00000350771 VPS72Q15906 364 aa35.91■■■■□ 3.34
H2AFV-204ENST00000350771 CARD14Q9BXL6 1004 aa35.91■■■■□ 3.34
H2AFV-204ENST00000350771 COL18A1P39060 1754 aa35.9■■■■□ 3.34
H2AFV-204ENST00000350771 CHRNA2Q15822 529 aa35.89■■■■□ 3.34
H2AFV-204ENST00000350771 AATKQ6ZMQ8 1374 aa35.89■■■■□ 3.34
H2AFV-204ENST00000350771 CAMTA1Q9Y6Y1 1673 aa35.88■■■■□ 3.33
H2AFV-204ENST00000350771 KIF20BQ96Q89 1820 aa35.88■■■■□ 3.33
H2AFV-204ENST00000350771 KIF7Q2M1P5 1343 aa35.87■■■■□ 3.33
H2AFV-204ENST00000350771 ABCC6O95255 1503 aa35.87■■■■□ 3.33
H2AFV-204ENST00000350771 NSD3Q9BZ95 1437 aa35.86■■■■□ 3.33
H2AFV-204ENST00000350771 ARHGEF25Q86VW2 580 aa35.86■■■■□ 3.33
H2AFV-204ENST00000350771 CCDC125Q86Z20 511 aa35.86■■■■□ 3.33
H2AFV-204ENST00000350771 CCDC9Q9Y3X0 531 aaKnown RBP35.86■■■■□ 3.33
H2AFV-204ENST00000350771 BRWD3Q6RI45 1802 aa35.85■■■■□ 3.33
H2AFV-204ENST00000350771 FYB1O15117 783 aa35.84■■■■□ 3.33
H2AFV-204ENST00000350771 POLR3GLQ9BT43 218 aa35.84■■■■□ 3.33
H2AFV-204ENST00000350771 EP400Q96L91 3159 aa35.81■■■■□ 3.32
H2AFV-204ENST00000350771 COG3Q96JB2 828 aa35.8■■■■□ 3.32
H2AFV-204ENST00000350771 COL5A2P05997 1499 aaPredicted RBP35.8■■■■□ 3.32
H2AFV-204ENST00000350771 LTN1O94822 1766 aa35.79■■■■□ 3.32
H2AFV-204ENST00000350771 ONECUT3O60422 494 aaPredicted RBP35.78■■■■□ 3.32
H2AFV-204ENST00000350771 SEPT12Q8IYM1 358 aa35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms