RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 EGFL6Q8IUX8 553 aa14.94□□□□□ -0.02
CTNNB1-201ENST00000349496 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
CTNNB1-201ENST00000349496 OGFRQ9NZT2 677 aa14.94□□□□□ -0.02
CTNNB1-201ENST00000349496 GTF2F1P35269 517 aaKnown RBP eCLIP14.93□□□□□ -0.022e-18■■■■■ 80.7
CTNNB1-201ENST00000349496 PRIMPOLQ96LW4 560 aa14.93□□□□□ -0.02
CTNNB1-201ENST00000349496 CALRP27797 417 aaKnown RBP14.93□□□□□ -0.02
CTNNB1-201ENST00000349496 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.93□□□□□ -0.02
CTNNB1-201ENST00000349496 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
CTNNB1-201ENST00000349496 RNF214Q8ND24 703 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 CCDC172P0C7W6 258 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 SEMA3FQ13275 785 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 MBD5Q9P267 1494 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 CAPN2P17655 700 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 PPP1R9BQ96SB3 815 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 BCL2L12Q9HB09 334 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 DIAPH3Q9NSV4 1193 aa14.92□□□□□ -0.02
CTNNB1-201ENST00000349496 FEZ1Q99689 392 aa14.91□□□□□ -0.02
CTNNB1-201ENST00000349496 NCAPGQ9BPX3 1015 aa14.91□□□□□ -0.02
CTNNB1-201ENST00000349496 C20orf194Q5TEA3 1177 aa14.91□□□□□ -0.02
CTNNB1-201ENST00000349496 KIF3BO15066 747 aa14.9□□□□□ -0.02
CTNNB1-201ENST00000349496 RNF123Q5XPI4 1314 aa14.9□□□□□ -0.02
CTNNB1-201ENST00000349496 MPHOSPH10O00566 681 aaKnown RBP14.9□□□□□ -0.02
CTNNB1-201ENST00000349496 SATB1Q01826 763 aa14.9□□□□□ -0.02
CTNNB1-201ENST00000349496 CTR9Q6PD62 1173 aa14.9□□□□□ -0.02
CTNNB1-201ENST00000349496 SLC26A8Q96RN1 970 aa14.9□□□□□ -0.02
CTNNB1-201ENST00000349496 CT47A1Q5JQC4 288 aaPredicted RBP14.89□□□□□ -0.03
CTNNB1-201ENST00000349496 TESK2Q96S53 571 aa14.89□□□□□ -0.03
CTNNB1-201ENST00000349496 PLA2R1Q13018 1463 aa14.89□□□□□ -0.03
CTNNB1-201ENST00000349496 MYBBP1AQ9BQG0 1328 aaKnown RBP14.89□□□□□ -0.03
CTNNB1-201ENST00000349496 CDC42BPAQ5VT25 1732 aa14.89□□□□□ -0.03
CTNNB1-201ENST00000349496 HS1BP3Q53T59 392 aa14.89□□□□□ -0.03
CTNNB1-201ENST00000349496 ADAMTS8Q9UP79 889 aa14.89□□□□□ -0.03
CTNNB1-201ENST00000349496 MCM5P33992 734 aa14.88□□□□□ -0.03
CTNNB1-201ENST00000349496 CAVIN1Q6NZI2 390 aaKnown RBP14.88□□□□□ -0.03
CTNNB1-201ENST00000349496 FEZ2Q9UHY8 353 aaPredicted RBP14.88□□□□□ -0.03
CTNNB1-201ENST00000349496 SAFB2Q14151 953 aaKnown RBP eCLIP14.88□□□□□ -0.03
CTNNB1-201ENST00000349496 FAM212AQ96EL1 285 aa14.88□□□□□ -0.03
CTNNB1-201ENST00000349496 PER1O15534 1290 aaPredicted RBP14.88□□□□□ -0.03
CTNNB1-201ENST00000349496 HMGB1P09429 215 aaKnown RBP14.88□□□□□ -0.03
CTNNB1-201ENST00000349496 MAP2K1Q02750 393 aaPredicted RBP14.87□□□□□ -0.03
CTNNB1-201ENST00000349496 NEUROD2Q15784 382 aa14.87□□□□□ -0.03
CTNNB1-201ENST00000349496 ICE2Q659A1 982 aa14.87□□□□□ -0.03
CTNNB1-201ENST00000349496 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
CTNNB1-201ENST00000349496 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
CTNNB1-201ENST00000349496 ZNF710Q8N1W2 664 aa14.87□□□□□ -0.03
CTNNB1-201ENST00000349496 ARHGEF12Q9NZN5 1544 aa14.86□□□□□ -0.03
CTNNB1-201ENST00000349496 ABCA8O94911 1581 aa14.86□□□□□ -0.03
CTNNB1-201ENST00000349496 CFAP70Q5T0N1 1121 aa14.86□□□□□ -0.03
CTNNB1-201ENST00000349496 CDCA8Q53HL2 280 aa14.86□□□□□ -0.03
CTNNB1-201ENST00000349496 PIK3R5Q8WYR1 880 aa14.86□□□□□ -0.03
CTNNB1-201ENST00000349496 CALR3Q96L12 384 aaKnown RBP14.86□□□□□ -0.03
CTNNB1-201ENST00000349496 FAM135AQ9P2D6 1515 aa14.86□□□□□ -0.03
CTNNB1-201ENST00000349496 ADGRL2O95490 1459 aa14.86□□□□□ -0.03
CTNNB1-201ENST00000349496 RNF217Q8TC41 542 aa14.85□□□□□ -0.03
CTNNB1-201ENST00000349496 KDM5CP41229 1560 aa14.85□□□□□ -0.03
CTNNB1-201ENST00000349496 SAMD9LQ8IVG5 1584 aa14.85□□□□□ -0.03
CTNNB1-201ENST00000349496 LRCH2Q5VUJ6 765 aa14.84□□□□□ -0.03
CTNNB1-201ENST00000349496 CCDC141Q6ZP82 1450 aa14.84□□□□□ -0.03
CTNNB1-201ENST00000349496 DHX16O60231 1041 aaKnown RBP14.84□□□□□ -0.03
CTNNB1-201ENST00000349496 KRT222Q8N1A0 295 aa14.84□□□□□ -0.03
CTNNB1-201ENST00000349496 SPAG9O60271 1321 aaKnown RBP14.84□□□□□ -0.03
CTNNB1-201ENST00000349496 EFCAB2Q5VUJ9 269 aa14.84□□□□□ -0.03
CTNNB1-201ENST00000349496 GGT6Q6P531 493 aa14.84□□□□□ -0.03
CTNNB1-201ENST00000349496 NLRP13Q86W25 1043 aa14.84□□□□□ -0.03
CTNNB1-201ENST00000349496 BIRC2Q13490 618 aa14.83□□□□□ -0.03
CTNNB1-201ENST00000349496 NOM1Q5C9Z4 860 aaKnown RBP14.83□□□□□ -0.03
CTNNB1-201ENST00000349496 ANTXR1Q9H6X2 564 aa14.83□□□□□ -0.03
CTNNB1-201ENST00000349496 TTC37Q6PGP7 1564 aa14.83□□□□□ -0.04
CTNNB1-201ENST00000349496 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.04
CTNNB1-201ENST00000349496 PPP2R5AQ15172 486 aa14.83□□□□□ -0.04
CTNNB1-201ENST00000349496 TMEM132EQ6IEE7 984 aa14.83□□□□□ -0.04
CTNNB1-201ENST00000349496 SEC24BO95487 1268 aa14.82□□□□□ -0.04
CTNNB1-201ENST00000349496 A2MP01023 1474 aa14.82□□□□□ -0.04
CTNNB1-201ENST00000349496 RALGAPBQ86X10 1494 aa14.82□□□□□ -0.04
CTNNB1-201ENST00000349496 PRAG1Q86YV5 1406 aa14.82□□□□□ -0.04
CTNNB1-201ENST00000349496 TEX35Q5T0J7 233 aa14.82□□□□□ -0.04
CTNNB1-201ENST00000349496 ZNF853P0CG23 659 aa14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 HNRNPH2P55795 449 aaKnown RBP14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 TMF1P82094 1093 aa14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 TERF2Q15554 542 aa14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 IRF6O14896 467 aa14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 E2F4Q16254 413 aa14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 DNAJC21Q5F1R6 531 aaKnown RBP14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 CEP120Q8N960 986 aa14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 TNPO1Q92973 898 aaKnown RBP14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 NOL10Q9BSC4 688 aaKnown RBP14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 ITSN2Q9NZM3 1697 aa14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 NOLC1Q14978 699 aaKnown RBP eCLIP14.81□□□□□ -0.045e-10■■■■■ 31.5
CTNNB1-201ENST00000349496 ZNF513Q8N8E2 541 aaPredicted RBP14.81□□□□□ -0.04
CTNNB1-201ENST00000349496 ANAPC15P60006 121 aa14.8□□□□□ -0.04
CTNNB1-201ENST00000349496 RAD51AP2Q09MP3 1159 aa14.8□□□□□ -0.04
CTNNB1-201ENST00000349496 RRP7AQ9Y3A4 280 aaKnown RBP14.8□□□□□ -0.04
CTNNB1-201ENST00000349496 SH3BP1Q9Y3L3 701 aa14.8□□□□□ -0.04
CTNNB1-201ENST00000349496 KNSTRNQ9Y448 316 aa14.8□□□□□ -0.04
CTNNB1-201ENST00000349496 MRVI1Q9Y6F6 885 aa14.8□□□□□ -0.04
CTNNB1-201ENST00000349496 GYS2P54840 703 aa14.8□□□□□ -0.04
CTNNB1-201ENST00000349496 NINLQ9Y2I6 1382 aa14.79□□□□□ -0.04
CTNNB1-201ENST00000349496 CWC15Q9P013 229 aaKnown RBP14.79□□□□□ -0.04
CTNNB1-201ENST00000349496 TRAK1Q9UPV9 953 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms