RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 BRD4O60885 1362 aaPredicted RBP28.24■■■□□ 2.11
CLTA-202ENST00000345519 ACEP12821 1306 aa28.24■■■□□ 2.11
CLTA-202ENST00000345519 NGDNQ8NEJ9 315 aaKnown RBP28.24■■■□□ 2.11
CLTA-202ENST00000345519 C8orf37Q96NL8 207 aa28.24■■■□□ 2.11
CLTA-202ENST00000345519 USP54Q70EL1 1684 aa28.23■■■□□ 2.11
CLTA-202ENST00000345519 PIK3C2AO00443 1686 aa28.23■■■□□ 2.11
CLTA-202ENST00000345519 ADAMTS2O95450 1211 aa28.22■■■□□ 2.11
CLTA-202ENST00000345519 SRPK2P78362 688 aaKnown RBP28.22■■■□□ 2.11
CLTA-202ENST00000345519 CABP2Q9NPB3 220 aa28.22■■■□□ 2.11
CLTA-202ENST00000345519 ATRNO75882 1429 aa28.21■■■□□ 2.11
CLTA-202ENST00000345519 SSH2Q76I76 1423 aa28.21■■■□□ 2.11
CLTA-202ENST00000345519 ATAD2Q6PL18 1390 aa28.2■■■□□ 2.1
CLTA-202ENST00000345519 USP6P35125 1406 aa28.19■■■□□ 2.1
CLTA-202ENST00000345519 NGLY1Q96IV0 654 aa28.17■■■□□ 2.1
CLTA-202ENST00000345519 CPSF1Q10570 1443 aaKnown RBP28.16■■■□□ 2.1
CLTA-202ENST00000345519 TESK2Q96S53 571 aa28.14■■■□□ 2.1
CLTA-202ENST00000345519 GLI3P10071 1580 aa28.14■■■□□ 2.1
CLTA-202ENST00000345519 CD163L1Q9NR16 1453 aa28.14■■■□□ 2.09
CLTA-202ENST00000345519 PUS7Q96PZ0 661 aaKnown RBP28.13■■■□□ 2.09
CLTA-202ENST00000345519 LMO7Q8WWI1 1683 aa28.13■■■□□ 2.09
CLTA-202ENST00000345519 SLIT3O75094 1523 aa28.13■■■□□ 2.09
CLTA-202ENST00000345519 CABLES1Q8TDN4 633 aa28.12■■■□□ 2.09
CLTA-202ENST00000345519 USP21Q9UK80 565 aa28.12■■■□□ 2.09
CLTA-202ENST00000345519 EP400Q96L91 3159 aa28.11■■■□□ 2.09
CLTA-202ENST00000345519 RGS12O14924 1447 aa28.11■■■□□ 2.09
CLTA-202ENST00000345519 CABP1Q9NZU7 370 aa28.11■■■□□ 2.09
CLTA-202ENST00000345519 RXRBP28702 533 aa28.1■■■□□ 2.09
CLTA-202ENST00000345519 USP19O94966 1318 aa28.1■■■□□ 2.09
CLTA-202ENST00000345519 USP47Q96K76 1375 aa28.1■■■□□ 2.09
CLTA-202ENST00000345519 RBM6P78332 1123 aaKnown RBP28.09■■■□□ 2.09
CLTA-202ENST00000345519 QTRT2Q9H974 415 aaKnown RBP28.09■■■□□ 2.09
CLTA-202ENST00000345519 LMOD2Q6P5Q4 547 aa28.08■■■□□ 2.09
CLTA-202ENST00000345519 TRPC5Q9UL62 973 aaPredicted RBP28.08■■■□□ 2.09
CLTA-202ENST00000345519 MYOM1P52179 1685 aa28.07■■■□□ 2.08
CLTA-202ENST00000345519 PAK3O75914 559 aaPredicted RBP28.06■■■□□ 2.08
CLTA-202ENST00000345519 BRWD3Q6RI45 1802 aa28.06■■■□□ 2.08
CLTA-202ENST00000345519 ST20-MTHFSA0A0A6YYL1 179 aa28.05■■■□□ 2.08
CLTA-202ENST00000345519 SLC24A1O60721 1099 aa28.05■■■□□ 2.08
CLTA-202ENST00000345519 CCER1Q8TC90 406 aaPredicted RBP28.05■■■□□ 2.08
CLTA-202ENST00000345519 NINLQ9Y2I6 1382 aa28.04■■■□□ 2.08
CLTA-202ENST00000345519 UNC5CLQ8IV45 518 aa28.04■■■□□ 2.08
CLTA-202ENST00000345519 COL18A1P39060 1754 aa28.04■■■□□ 2.08
CLTA-202ENST00000345519 ZNF692Q9BU19 519 aaPredicted RBP28.03■■■□□ 2.08
CLTA-202ENST00000345519 CPDO75976 1380 aa28.02■■■□□ 2.08
CLTA-202ENST00000345519 FAM83GA6ND36 823 aa28.01■■■□□ 2.07
CLTA-202ENST00000345519 HAP1P54257 671 aaPredicted RBP28.01■■■□□ 2.07
CLTA-202ENST00000345519 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
CLTA-202ENST00000345519 TTC21AQ8NDW8 1320 aa27.98■■■□□ 2.07
CLTA-202ENST00000345519 KTN1Q86UP2 1357 aaKnown RBP27.98■■■□□ 2.07
CLTA-202ENST00000345519 KIAA0232Q92628 1395 aa27.98■■■□□ 2.07
CLTA-202ENST00000345519 NFAT5O94916 1531 aa27.97■■■□□ 2.07
CLTA-202ENST00000345519 GJD4Q96KN9 370 aaPredicted RBP27.97■■■□□ 2.07
CLTA-202ENST00000345519 THSD7AQ9UPZ6 1657 aa27.97■■■□□ 2.07
CLTA-202ENST00000345519 VPS72Q15906 364 aa27.96■■■□□ 2.07
CLTA-202ENST00000345519 ABCC6O95255 1503 aa27.96■■■□□ 2.07
CLTA-202ENST00000345519 LTN1O94822 1766 aa27.96■■■□□ 2.07
CLTA-202ENST00000345519 RGPD5Q99666 1765 aa27.96■■■□□ 2.07
CLTA-202ENST00000345519 TTC21BQ7Z4L5 1316 aa27.95■■■□□ 2.07
CLTA-202ENST00000345519 EDC4Q6P2E9 1401 aaKnown RBP27.95■■■□□ 2.07
CLTA-202ENST00000345519 NLRP13Q86W25 1043 aa27.95■■■□□ 2.06
CLTA-202ENST00000345519 A0A1W2PP64 1363 aa27.95■■■□□ 2.06
CLTA-202ENST00000345519 CAMTA1Q9Y6Y1 1673 aa27.94■■■□□ 2.06
CLTA-202ENST00000345519 WNK3Q9BYP7 1800 aa27.92■■■□□ 2.06
CLTA-202ENST00000345519 USP31Q70CQ4 1352 aa27.92■■■□□ 2.06
CLTA-202ENST00000345519 KIF20BQ96Q89 1820 aa27.91■■■□□ 2.06
CLTA-202ENST00000345519 NUTM2GQ5VZR2 741 aa27.91■■■□□ 2.06
CLTA-202ENST00000345519 PRDM11Q9NQV5 511 aa27.9■■■□□ 2.06
CLTA-202ENST00000345519 BTG4Q9NY30 223 aa27.9■■■□□ 2.06
CLTA-202ENST00000345519 PLEKHG5O94827 1062 aa27.89■■■□□ 2.06
CLTA-202ENST00000345519 GCP02774 474 aa27.89■■■□□ 2.06
CLTA-202ENST00000345519 SLC12A5Q9H2X9 1139 aa27.89■■■□□ 2.06
CLTA-202ENST00000345519 ONECUT3O60422 494 aaPredicted RBP27.88■■■□□ 2.05
CLTA-202ENST00000345519 TMF1P82094 1093 aa27.88■■■□□ 2.05
CLTA-202ENST00000345519 ANKRD36BQ8N2N9 1353 aa27.87■■■□□ 2.05
CLTA-202ENST00000345519 OVOS2A0A0J9YW53 1432 aa27.87■■■□□ 2.05
CLTA-202ENST00000345519 OVOS2Q6IE36 1432 aa27.87■■■□□ 2.05
CLTA-202ENST00000345519 NLRP6P59044 892 aa27.86■■■□□ 2.05
CLTA-202ENST00000345519 COL5A2P05997 1499 aaPredicted RBP27.86■■■□□ 2.05
CLTA-202ENST00000345519 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
CLTA-202ENST00000345519 ZC3H6P61129 1189 aaKnown RBP27.84■■■□□ 2.05
CLTA-202ENST00000345519 AATKQ6ZMQ8 1374 aa27.84■■■□□ 2.05
CLTA-202ENST00000345519 PARP4Q9UKK3 1724 aaKnown RBP27.84■■■□□ 2.05
CLTA-202ENST00000345519 HDGFL2Q7Z4V5 671 aaPredicted RBP27.83■■■□□ 2.05
CLTA-202ENST00000345519 SPATA31A5Q5VU36 1347 aa27.83■■■□□ 2.05
CLTA-202ENST00000345519 SPATA31A7Q8IWB4 1347 aa27.83■■■□□ 2.05
CLTA-202ENST00000345519 TMC1Q8TDI8 760 aa27.82■■■□□ 2.04
CLTA-202ENST00000345519 CHRNA2Q15822 529 aa27.81■■■□□ 2.04
CLTA-202ENST00000345519 CDCA8Q53HL2 280 aa27.81■■■□□ 2.04
CLTA-202ENST00000345519 UPF1Q92900 1129 aaKnown RBP eCLIP27.8■■■□□ 2.04
CLTA-202ENST00000345519 KCNH5Q8NCM2 988 aa27.79■■■□□ 2.04
CLTA-202ENST00000345519 ANKRD26Q9UPS8 1709 aa27.78■■■□□ 2.04
CLTA-202ENST00000345519 FAM208AQ9UK61 1670 aaKnown RBP27.78■■■□□ 2.04
CLTA-202ENST00000345519 SPATA31A1Q5TZJ5 1347 aa27.77■■■□□ 2.04
CLTA-202ENST00000345519 ARHGEF25Q86VW2 580 aa27.76■■■□□ 2.03
CLTA-202ENST00000345519 NME9Q86XW9 330 aa27.74■■■□□ 2.03
CLTA-202ENST00000345519 EIF4G2P78344 907 aaKnown RBP eCLIP27.73■■■□□ 2.03
CLTA-202ENST00000345519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.73■■■□□ 2.03
CLTA-202ENST00000345519 CRB1P82279 1406 aa27.73■■■□□ 2.03
CLTA-202ENST00000345519 LRRC37A3O60309 1634 aa27.72■■■□□ 2.03
CLTA-202ENST00000345519 SEPT12Q8IYM1 358 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms