RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 KIF20BQ96Q89 1820 aa24.23■■□□□ 1.47
RBM38-202ENST00000344785 NME9Q86XW9 330 aa24.22■■□□□ 1.47
RBM38-202ENST00000344785 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
RBM38-202ENST00000344785 PTPRUQ92729 1446 aa24.22■■□□□ 1.47
RBM38-202ENST00000344785 POLKQ9UBT6 870 aa24.2■■□□□ 1.47
RBM38-202ENST00000344785 CCDC61Q9Y6R9 512 aa24.2■■□□□ 1.47
RBM38-202ENST00000344785 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.19■■□□□ 1.46
RBM38-202ENST00000344785 CCDC27Q2M243 656 aa24.19■■□□□ 1.46
RBM38-202ENST00000344785 FER1L4A9Z1Z3 1794 aa24.18■■□□□ 1.46
RBM38-202ENST00000344785 WDR63Q8IWG1 891 aa24.18■■□□□ 1.46
RBM38-202ENST00000344785 ADGRB2O60241 1585 aa24.17■■□□□ 1.46
RBM38-202ENST00000344785 ARHGAP23Q9P227 1491 aa24.17■■□□□ 1.46
RBM38-202ENST00000344785 EDC4Q6P2E9 1401 aaKnown RBP24.17■■□□□ 1.46
RBM38-202ENST00000344785 DIAPH1O60610 1272 aaKnown RBP24.16■■□□□ 1.46
RBM38-202ENST00000344785 NUTM2FA1L443 756 aa24.16■■□□□ 1.46
RBM38-202ENST00000344785 PPM1GO15355 546 aaPredicted RBP24.16■■□□□ 1.46
RBM38-202ENST00000344785 SLIT1O75093 1534 aa24.15■■□□□ 1.46
RBM38-202ENST00000344785 EID1Q9Y6B2 187 aa24.15■■□□□ 1.46
RBM38-202ENST00000344785 SKAP1Q86WV1 359 aa24.15■■□□□ 1.46
RBM38-202ENST00000344785 CDC42BPGQ6DT37 1551 aa24.15■■□□□ 1.46
RBM38-202ENST00000344785 EMILIN1Q9Y6C2 1016 aa24.14■■□□□ 1.45
RBM38-202ENST00000344785 TMPOP42166 694 aaKnown RBP24.13■■□□□ 1.45
RBM38-202ENST00000344785 TRIM35Q9UPQ4 493 aa24.13■■□□□ 1.45
RBM38-202ENST00000344785 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.12■■□□□ 1.45
RBM38-202ENST00000344785 AMOTL2Q9Y2J4 779 aa24.12■■□□□ 1.45
RBM38-202ENST00000344785 NCBP3Q53F19 620 aaKnown RBP24.11■■□□□ 1.45
RBM38-202ENST00000344785 MAP2P11137 1827 aaKnown RBP24.11■■□□□ 1.45
RBM38-202ENST00000344785 MON2Q7Z3U7 1717 aa24.09■■□□□ 1.45
RBM38-202ENST00000344785 MSH5O43196 834 aa24.09■■□□□ 1.45
RBM38-202ENST00000344785 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
RBM38-202ENST00000344785 TBX22Q9Y458 520 aa24.09■■□□□ 1.45
RBM38-202ENST00000344785 RARSP54136 660 aaKnown RBP24.09■■□□□ 1.45
RBM38-202ENST00000344785 AKAP12Q02952 1782 aa24.07■■□□□ 1.44
RBM38-202ENST00000344785 RRS1Q15050 365 aaKnown RBP24.07■■□□□ 1.44
RBM38-202ENST00000344785 TSR2Q969E8 191 aaKnown RBP24.07■■□□□ 1.44
RBM38-202ENST00000344785 KDM2BQ8NHM5 1336 aa24.07■■□□□ 1.44
RBM38-202ENST00000344785 FANCIQ9NVI1 1328 aa24.07■■□□□ 1.44
RBM38-202ENST00000344785 ACEP12821 1306 aa24.06■■□□□ 1.44
RBM38-202ENST00000344785 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
RBM38-202ENST00000344785 ZNF692Q9BU19 519 aaPredicted RBP24.05■■□□□ 1.44
RBM38-202ENST00000344785 MAPK8IP3Q9UPT6 1336 aa24.05■■□□□ 1.44
RBM38-202ENST00000344785 COG3Q96JB2 828 aa24.05■■□□□ 1.44
RBM38-202ENST00000344785 BCL2L13Q9BXK5 485 aa24.05■■□□□ 1.44
RBM38-202ENST00000344785 TNNQ9UQP3 1299 aa24.05■■□□□ 1.44
RBM38-202ENST00000344785 PLEKHG3A1L390 1219 aa24.04■■□□□ 1.44
RBM38-202ENST00000344785 IL13P35225 146 aa24.04■■□□□ 1.44
RBM38-202ENST00000344785 RIPK4P57078 832 aa24.04■■□□□ 1.44
RBM38-202ENST00000344785 PANK1Q8TE04 598 aa24.04■■□□□ 1.44
RBM38-202ENST00000344785 LRRC7Q96NW7 1537 aa24.03■■□□□ 1.44
RBM38-202ENST00000344785 FCHSD2O94868 740 aa24.03■■□□□ 1.44
RBM38-202ENST00000344785 HMOX1P09601 288 aa24.03■■□□□ 1.44
RBM38-202ENST00000344785 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
RBM38-202ENST00000344785 PHACTR3Q96KR7 559 aa24.03■■□□□ 1.44
RBM38-202ENST00000344785 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
RBM38-202ENST00000344785 TTC21BQ7Z4L5 1316 aa24.02■■□□□ 1.44
RBM38-202ENST00000344785 MYH16Q9H6N6 1097 aa24.02■■□□□ 1.44
RBM38-202ENST00000344785 ITSN1Q15811 1721 aa24.02■■□□□ 1.44
RBM38-202ENST00000344785 FRAT1Q92837 279 aaPredicted RBP24.02■■□□□ 1.44
RBM38-202ENST00000344785 TOPAZ1Q8N9V7 1692 aa24.02■■□□□ 1.44
RBM38-202ENST00000344785 PDE3AQ14432 1141 aa24■■□□□ 1.43
RBM38-202ENST00000344785 COG6Q9Y2V7 657 aa23.99■■□□□ 1.43
RBM38-202ENST00000344785 RLBP1P12271 317 aa23.99■■□□□ 1.43
RBM38-202ENST00000344785 PMFBP1Q8TBY8 1022 aa23.99■■□□□ 1.43
RBM38-202ENST00000344785 CDK12Q9NYV4 1490 aaPredicted RBP23.98■■□□□ 1.43
RBM38-202ENST00000344785 TCERG1O14776 1098 aaKnown RBP23.98■■□□□ 1.43
RBM38-202ENST00000344785 PTCH1Q13635 1447 aa23.98■■□□□ 1.43
RBM38-202ENST00000344785 KCNA6P17658 529 aa23.98■■□□□ 1.43
RBM38-202ENST00000344785 EXOSC9Q06265 439 aaKnown RBP23.98■■□□□ 1.43
RBM38-202ENST00000344785 NRKQ7Z2Y5 1582 aa23.97■■□□□ 1.43
RBM38-202ENST00000344785 USP6P35125 1406 aa23.97■■□□□ 1.43
RBM38-202ENST00000344785 CEP170BQ9Y4F5 1589 aaPredicted RBP23.96■■□□□ 1.43
RBM38-202ENST00000344785 CANXP27824 592 aaKnown RBP23.96■■□□□ 1.43
RBM38-202ENST00000344785 RIMS1Q86UR5 1692 aaKnown RBP23.96■■□□□ 1.43
RBM38-202ENST00000344785 SSH2Q76I76 1423 aa23.95■■□□□ 1.42
RBM38-202ENST00000344785 CENPQQ7L2Z9 268 aaPredicted RBP23.95■■□□□ 1.42
RBM38-202ENST00000344785 PNNQ9H307 717 aaKnown RBP23.95■■□□□ 1.42
RBM38-202ENST00000344785 OVOS2A0A0J9YW53 1432 aa23.93■■□□□ 1.42
RBM38-202ENST00000344785 OVOS2Q6IE36 1432 aa23.93■■□□□ 1.42
RBM38-202ENST00000344785 IGHDP01880 384 aa23.93■■□□□ 1.42
RBM38-202ENST00000344785 THUMPD2Q9BTF0 503 aaKnown RBP23.93■■□□□ 1.42
RBM38-202ENST00000344785 IL16Q14005 1332 aa23.93■■□□□ 1.42
RBM38-202ENST00000344785 XRN1Q8IZH2 1706 aaKnown RBP23.93■■□□□ 1.42
RBM38-202ENST00000344785 DIP2AQ14689 1571 aa23.92■■□□□ 1.42
RBM38-202ENST00000344785 RGPD8O14715 1765 aaPredicted RBP23.92■■□□□ 1.42
RBM38-202ENST00000344785 PDE4AP27815 886 aa23.91■■□□□ 1.42
RBM38-202ENST00000344785 NFE2L2Q16236 605 aa23.91■■□□□ 1.42
RBM38-202ENST00000344785 CLUAP1Q96AJ1 413 aa23.91■■□□□ 1.42
RBM38-202ENST00000344785 SOX12O15370 315 aa23.89■■□□□ 1.41
RBM38-202ENST00000344785 MS4A1P11836 297 aa23.89■■□□□ 1.41
RBM38-202ENST00000344785 EIF4A2Q14240 407 aaKnown RBP23.89■■□□□ 1.41
RBM38-202ENST00000344785 SSH1Q8WYL5 1049 aa23.89■■□□□ 1.41
RBM38-202ENST00000344785 AEBP1Q8IUX7 1158 aa23.88■■□□□ 1.41
RBM38-202ENST00000344785 RBM33Q96EV2 1170 aaKnown RBP23.88■■□□□ 1.41
RBM38-202ENST00000344785 BACH2Q9BYV9 841 aa23.88■■□□□ 1.41
RBM38-202ENST00000344785 HSP90AB2PQ58FF8 381 aa23.87■■□□□ 1.41
RBM38-202ENST00000344785 USP31Q70CQ4 1352 aa23.86■■□□□ 1.41
RBM38-202ENST00000344785 CT47B1P0C2W7 299 aaPredicted RBP23.86■■□□□ 1.41
RBM38-202ENST00000344785 NGDNQ8NEJ9 315 aaKnown RBP23.86■■□□□ 1.41
RBM38-202ENST00000344785 PEAK1Q9H792 1746 aa23.86■■□□□ 1.41
RBM38-202ENST00000344785 LAS1LQ9Y4W2 734 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms