RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 TIAM1Q13009 1591 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 NEUROD6Q96NK8 337 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 CHMP4AQ9BY43 222 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 SULT6B1Q6IMI4 303 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 AEBP1Q8IUX7 1158 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 CKAP2LQ8IYA6 745 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 TSPY26PQ9H489 355 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 NUCB2P80303 420 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 TRIM27P14373 513 aa9.43□□□□□ -0.9
KPNA1-201ENST00000344337 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
KPNA1-201ENST00000344337 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
KPNA1-201ENST00000344337 EVC2Q86UK5 1308 aa9.43□□□□□ -0.9
KPNA1-201ENST00000344337 DISP3Q9P2K9 1392 aa9.43□□□□□ -0.9
KPNA1-201ENST00000344337 KRT24Q2M2I5 525 aa9.43□□□□□ -0.9
KPNA1-201ENST00000344337 SASS6Q6UVJ0 657 aa9.43□□□□□ -0.9
KPNA1-201ENST00000344337 EIF3AQ14152 1382 aaKnown RBP9.43□□□□□ -0.9
KPNA1-201ENST00000344337 IFIT2P09913 472 aaKnown RBP9.42□□□□□ -0.9
KPNA1-201ENST00000344337 DNAJC2Q99543 621 aaKnown RBP9.42□□□□□ -0.9
KPNA1-201ENST00000344337 TTC12Q9H892 705 aaPredicted RBP9.42□□□□□ -0.9
KPNA1-201ENST00000344337 FYB1O15117 783 aa9.42□□□□□ -0.9
KPNA1-201ENST00000344337 RAB11FIP4Q86YS3 637 aa9.42□□□□□ -0.9
KPNA1-201ENST00000344337 CCDC173Q0VFZ6 552 aa9.42□□□□□ -0.9
KPNA1-201ENST00000344337 HSP90AA4PQ58FG1 418 aa9.42□□□□□ -0.9
KPNA1-201ENST00000344337 PDE3AQ14432 1141 aa9.42□□□□□ -0.9
KPNA1-201ENST00000344337 ZGPATQ8N5A5 531 aaKnown RBP9.42□□□□□ -0.9
KPNA1-201ENST00000344337 C16orf45Q96MC5 204 aaPredicted RBP9.42□□□□□ -0.9
KPNA1-201ENST00000344337 PCF11O94913 1555 aaKnown RBP9.42□□□□□ -0.9
KPNA1-201ENST00000344337 RBM25P49756 843 aaKnown RBP9.42□□□□□ -0.9
KPNA1-201ENST00000344337 CGNQ9P2M7 1197 aaKnown RBP9.42□□□□□ -0.9
KPNA1-201ENST00000344337 FBXO3Q9UK99 471 aa9.42□□□□□ -0.9
KPNA1-201ENST00000344337 SMC2O95347 1197 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 ANXA1P04083 346 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 TXNDC2Q86VQ3 553 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 WAPLQ7Z5K2 1190 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 ATAD2Q6PL18 1390 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 TBC1D9Q6ZT07 1266 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 SYTL4Q96C24 671 aaPredicted RBP9.41□□□□□ -0.9
KPNA1-201ENST00000344337 CUX1P39880 1505 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 SRRTQ9BXP5 876 aaKnown RBP9.41□□□□□ -0.9
KPNA1-201ENST00000344337 RAD21O60216 631 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 CCDC83Q8IWF9 413 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 SDF4Q9BRK5 362 aa9.41□□□□□ -0.9
KPNA1-201ENST00000344337 TMPOP42166 694 aaKnown RBP9.4□□□□□ -0.9
KPNA1-201ENST00000344337 PPARDQ03181 441 aa9.4□□□□□ -0.9
KPNA1-201ENST00000344337 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.9
KPNA1-201ENST00000344337 GAS2L2Q8NHY3 880 aa9.4□□□□□ -0.9
KPNA1-201ENST00000344337 NOC3LQ8WTT2 800 aaKnown RBP9.4□□□□□ -0.9
KPNA1-201ENST00000344337 CCDC39Q9UFE4 941 aa9.4□□□□□ -0.9
KPNA1-201ENST00000344337 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
KPNA1-201ENST00000344337 HFM1A2PYH4 1435 aa9.4□□□□□ -0.9
KPNA1-201ENST00000344337 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.9
KPNA1-201ENST00000344337 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
KPNA1-201ENST00000344337 GIMAP6Q6P9H5 292 aa9.4□□□□□ -0.9
KPNA1-201ENST00000344337 USHBP1Q8N6Y0 703 aa9.4□□□□□ -0.91
KPNA1-201ENST00000344337 NCOA1Q15788 1441 aa9.4□□□□□ -0.91
KPNA1-201ENST00000344337 RRP9O43818 475 aaKnown RBP9.39□□□□□ -0.91
KPNA1-201ENST00000344337 MYL6BP14649 208 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 TEFQ10587 303 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 PRXQ9BXM0 1461 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 POLR3GO15318 223 aaPredicted RBP9.39□□□□□ -0.91
KPNA1-201ENST00000344337 HCLS1P14317 486 aaPredicted RBP9.39□□□□□ -0.91
KPNA1-201ENST00000344337 ZSCAN30Q86W11 494 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 GPATCH3Q96I76 525 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 GAPVD1Q14C86 1478 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 PPP4R3BQ5MIZ7 849 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 TBC1D32Q96NH3 1257 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 PLEKHH1Q9ULM0 1364 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 ERBINQ96RT1 1412 aa9.39□□□□□ -0.91
KPNA1-201ENST00000344337 SAMD1Q6SPF0 538 aaPredicted RBP9.39□□□□□ -0.91
KPNA1-201ENST00000344337 ANKRD30BQ9BXX2 1392 aa9.38□□□□□ -0.91
KPNA1-201ENST00000344337 BAG4O95429 457 aaKnown RBP9.38□□□□□ -0.91
KPNA1-201ENST00000344337 UBTFL1P0CB47 393 aaPredicted RBP9.38□□□□□ -0.91
KPNA1-201ENST00000344337 CARMIL2Q6F5E8 1435 aa9.38□□□□□ -0.91
KPNA1-201ENST00000344337 CASKIN1Q8WXD9 1431 aa9.38□□□□□ -0.91
KPNA1-201ENST00000344337 TPM2P07951 284 aa9.38□□□□□ -0.91
KPNA1-201ENST00000344337 CPA1P15085 419 aa9.38□□□□□ -0.91
KPNA1-201ENST00000344337 VGLL3A8MV65 326 aa9.37□□□□□ -0.91
KPNA1-201ENST00000344337 ZKSCAN1P17029 563 aaPredicted RBP9.37□□□□□ -0.91
KPNA1-201ENST00000344337 CCDC82Q8N4S0 544 aa9.37□□□□□ -0.91
KPNA1-201ENST00000344337 GPRASP1Q5JY77 1395 aa9.37□□□□□ -0.91
KPNA1-201ENST00000344337 CSPP1Q1MSJ5 1256 aa9.37□□□□□ -0.91
KPNA1-201ENST00000344337 NECAB1Q8N987 351 aa9.37□□□□□ -0.91
KPNA1-201ENST00000344337 JAKMIP1Q96N16 626 aaKnown RBP9.37□□□□□ -0.91
KPNA1-201ENST00000344337 FSD1Q9BTV5 496 aa9.37□□□□□ -0.91
KPNA1-201ENST00000344337 API5Q9BZZ5 524 aaKnown RBP9.37□□□□□ -0.91
KPNA1-201ENST00000344337 ZSWIM4Q9H7M6 989 aa9.37□□□□□ -0.91
KPNA1-201ENST00000344337 CASTP20810 708 aaKnown RBP9.36□□□□□ -0.91
KPNA1-201ENST00000344337 OTUD7AQ8TE49 926 aaPredicted RBP9.36□□□□□ -0.91
KPNA1-201ENST00000344337 EMILIN1Q9Y6C2 1016 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 KIAA1107Q9UPP5 1409 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 WASHC4Q2M389 1173 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 ZSCAN23Q3MJ62 389 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 PCMTD1Q96MG8 357 aaPredicted RBP9.36□□□□□ -0.91
KPNA1-201ENST00000344337 LRRC2Q9BYS8 371 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 BIN1O00499 593 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 NSD3Q9BZ95 1437 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 ERC2O15083 957 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 RRP12Q5JTH9 1297 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms