RNA–Protein interactions for RNA: ENST00000343619.8

ATP6V0A1-202, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP6V0A1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-202ENST00000343619 NUDCQ9Y266 331 aa12.55□□□□□ -0.4
ATP6V0A1-202ENST00000343619 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
ATP6V0A1-202ENST00000343619 ATF3P18847 181 aa12.55□□□□□ -0.4
ATP6V0A1-202ENST00000343619 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
ATP6V0A1-202ENST00000343619 PSME1Q06323 249 aa12.54□□□□□ -0.4
ATP6V0A1-202ENST00000343619 RRS1Q15050 365 aaKnown RBP12.54□□□□□ -0.4
ATP6V0A1-202ENST00000343619 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
ATP6V0A1-202ENST00000343619 APAF1O14727 1248 aa12.53□□□□□ -0.4
ATP6V0A1-202ENST00000343619 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
ATP6V0A1-202ENST00000343619 NLRP6P59044 892 aa12.53□□□□□ -0.4
ATP6V0A1-202ENST00000343619 EMILIN1Q9Y6C2 1016 aa12.53□□□□□ -0.4
ATP6V0A1-202ENST00000343619 FOXO3O43524 673 aa12.53□□□□□ -0.4
ATP6V0A1-202ENST00000343619 ORAI2Q96SN7 254 aa12.52□□□□□ -0.4
ATP6V0A1-202ENST00000343619 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
ATP6V0A1-202ENST00000343619 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.41
ATP6V0A1-202ENST00000343619 CPSF1Q10570 1443 aaKnown RBP12.51□□□□□ -0.41
ATP6V0A1-202ENST00000343619 DIAPH1O60610 1272 aaKnown RBP12.51□□□□□ -0.41
ATP6V0A1-202ENST00000343619 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
ATP6V0A1-202ENST00000343619 POLR3AO14802 1390 aaPredicted RBP12.51□□□□□ -0.41
ATP6V0A1-202ENST00000343619 TMEM94Q12767 1356 aa12.5□□□□□ -0.41
ATP6V0A1-202ENST00000343619 POLKQ9UBT6 870 aa12.5□□□□□ -0.41
ATP6V0A1-202ENST00000343619 XRN1Q8IZH2 1706 aaKnown RBP12.5□□□□□ -0.41
ATP6V0A1-202ENST00000343619 AEBP2Q6ZN18 517 aaPredicted RBP12.5□□□□□ -0.41
ATP6V0A1-202ENST00000343619 ADGRL3Q9HAR2 1447 aa12.49□□□□□ -0.41
ATP6V0A1-202ENST00000343619 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
ATP6V0A1-202ENST00000343619 NEFMP07197 916 aa12.49□□□□□ -0.41
ATP6V0A1-202ENST00000343619 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
ATP6V0A1-202ENST00000343619 CDC42BPGQ6DT37 1551 aa12.49□□□□□ -0.41
ATP6V0A1-202ENST00000343619 USP6P35125 1406 aa12.49□□□□□ -0.41
ATP6V0A1-202ENST00000343619 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
ATP6V0A1-202ENST00000343619 NKTRP30414 1462 aaKnown RBP12.48□□□□□ -0.41
ATP6V0A1-202ENST00000343619 MAPK8IP3Q9UPT6 1336 aa12.48□□□□□ -0.41
ATP6V0A1-202ENST00000343619 CHD2O14647 1828 aaKnown RBP12.48□□□□□ -0.41
ATP6V0A1-202ENST00000343619 HMOX1P09601 288 aa12.47□□□□□ -0.41
ATP6V0A1-202ENST00000343619 AMPHP49418 695 aa12.47□□□□□ -0.41
ATP6V0A1-202ENST00000343619 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
ATP6V0A1-202ENST00000343619 ADGRB2O60241 1585 aa12.47□□□□□ -0.41
ATP6V0A1-202ENST00000343619 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
ATP6V0A1-202ENST00000343619 TTC21AQ8NDW8 1320 aa12.46□□□□□ -0.41
ATP6V0A1-202ENST00000343619 TCP11L2Q8N4U5 519 aa12.46□□□□□ -0.41
ATP6V0A1-202ENST00000343619 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
ATP6V0A1-202ENST00000343619 LTV1Q96GA3 475 aaPredicted RBP12.45□□□□□ -0.42
ATP6V0A1-202ENST00000343619 USP32Q8NFA0 1604 aa12.45□□□□□ -0.42
ATP6V0A1-202ENST00000343619 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
ATP6V0A1-202ENST00000343619 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
ATP6V0A1-202ENST00000343619 MSH6P52701 1360 aa12.45□□□□□ -0.42
ATP6V0A1-202ENST00000343619 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
ATP6V0A1-202ENST00000343619 ITSN1Q15811 1721 aa12.44□□□□□ -0.42
ATP6V0A1-202ENST00000343619 A0A0G2JS52 829 aa12.44□□□□□ -0.42
ATP6V0A1-202ENST00000343619 BCL11AQ9H165 835 aa12.44□□□□□ -0.42
ATP6V0A1-202ENST00000343619 BLMP54132 1417 aaPredicted RBP12.44□□□□□ -0.42
ATP6V0A1-202ENST00000343619 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
ATP6V0A1-202ENST00000343619 KRT28Q7Z3Y7 464 aa12.43□□□□□ -0.42
ATP6V0A1-202ENST00000343619 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
ATP6V0A1-202ENST00000343619 HSP90AB2PQ58FF8 381 aa12.43□□□□□ -0.42
ATP6V0A1-202ENST00000343619 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
ATP6V0A1-202ENST00000343619 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
ATP6V0A1-202ENST00000343619 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
ATP6V0A1-202ENST00000343619 NALCNQ8IZF0 1738 aa12.42□□□□□ -0.42
ATP6V0A1-202ENST00000343619 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
ATP6V0A1-202ENST00000343619 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
ATP6V0A1-202ENST00000343619 PNNQ9H307 717 aaKnown RBP12.41□□□□□ -0.42
ATP6V0A1-202ENST00000343619 FMN2Q9NZ56 1722 aa12.39□□□□□ -0.43
ATP6V0A1-202ENST00000343619 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
ATP6V0A1-202ENST00000343619 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
ATP6V0A1-202ENST00000343619 MON2Q7Z3U7 1717 aa12.39□□□□□ -0.43
ATP6V0A1-202ENST00000343619 RIPK4P57078 832 aa12.39□□□□□ -0.43
ATP6V0A1-202ENST00000343619 RCAN3Q9UKA8 241 aa12.39□□□□□ -0.43
ATP6V0A1-202ENST00000343619 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 EIF4A2Q14240 407 aaKnown RBP12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 IL13P35225 146 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 AKAP12Q02952 1782 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 FCHSD2O94868 740 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 LAS1LQ9Y4W2 734 aaKnown RBP12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 INSRP06213 1382 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 OVOS2A0A0J9YW53 1432 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 OVOS2Q6IE36 1432 aa12.38□□□□□ -0.43
ATP6V0A1-202ENST00000343619 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
ATP6V0A1-202ENST00000343619 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
ATP6V0A1-202ENST00000343619 TOPAZ1Q8N9V7 1692 aa12.37□□□□□ -0.43
ATP6V0A1-202ENST00000343619 ZC3H6P61129 1189 aaKnown RBP12.37□□□□□ -0.43
ATP6V0A1-202ENST00000343619 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
ATP6V0A1-202ENST00000343619 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
ATP6V0A1-202ENST00000343619 NWD1Q149M9 1564 aa12.36□□□□□ -0.43
ATP6V0A1-202ENST00000343619 NPHP3Q7Z494 1330 aa12.36□□□□□ -0.43
ATP6V0A1-202ENST00000343619 SLAIN2Q9P270 581 aa12.36□□□□□ -0.43
ATP6V0A1-202ENST00000343619 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
ATP6V0A1-202ENST00000343619 ANKRD26Q9UPS8 1709 aa12.36□□□□□ -0.43
ATP6V0A1-202ENST00000343619 PNPLA6Q8IY17 1366 aa12.36□□□□□ -0.43
ATP6V0A1-202ENST00000343619 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
ATP6V0A1-202ENST00000343619 NGEFQ8N5V2 710 aa12.35□□□□□ -0.43
ATP6V0A1-202ENST00000343619 PHACTR3Q96KR7 559 aa12.35□□□□□ -0.43
ATP6V0A1-202ENST00000343619 E9PSI1 815 aa12.35□□□□□ -0.43
ATP6V0A1-202ENST00000343619 KCNH5Q8NCM2 988 aa12.35□□□□□ -0.43
ATP6V0A1-202ENST00000343619 GCP02774 474 aa12.35□□□□□ -0.43
ATP6V0A1-202ENST00000343619 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
ATP6V0A1-202ENST00000343619 FLT4P35916 1363 aa12.34□□□□□ -0.43
ATP6V0A1-202ENST00000343619 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms