RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 PHF8Q9UPP1 1060 aa29.09■■■□□ 2.25
SOX18-201ENST00000340356 SSH2Q76I76 1423 aa29.09■■■□□ 2.25
SOX18-201ENST00000340356 LRRC7Q96NW7 1537 aa29.09■■■□□ 2.25
SOX18-201ENST00000340356 NCOA3Q9Y6Q9 1424 aa29.08■■■□□ 2.25
SOX18-201ENST00000340356 ORAI2Q96SN7 254 aa29.07■■■□□ 2.24
SOX18-201ENST00000340356 DMRT2Q9Y5R5 561 aa29.07■■■□□ 2.24
SOX18-201ENST00000340356 HNRNPUQ00839 825 aaKnown RBP eCLIP29.06■■■□□ 2.24
SOX18-201ENST00000340356 FBLN1P23142 703 aa29.04■■■□□ 2.24
SOX18-201ENST00000340356 MTHFSP49914 203 aa29.04■■■□□ 2.24
SOX18-201ENST00000340356 C1orf167Q5SNV9 1468 aa29.04■■■□□ 2.24
SOX18-201ENST00000340356 ATF3P18847 181 aa29.04■■■□□ 2.24
SOX18-201ENST00000340356 DCCP43146 1447 aa29.02■■■□□ 2.24
SOX18-201ENST00000340356 MST1RQ04912 1400 aa29.02■■■□□ 2.24
SOX18-201ENST00000340356 MSH6P52701 1360 aa29.01■■■□□ 2.23
SOX18-201ENST00000340356 COG3Q96JB2 828 aa29■■■□□ 2.23
SOX18-201ENST00000340356 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
SOX18-201ENST00000340356 SENP3-EIF4A1A0A087X0R7 540 aa28.99■■■□□ 2.23
SOX18-201ENST00000340356 TTC21AQ8NDW8 1320 aa28.98■■■□□ 2.23
SOX18-201ENST00000340356 PIK3C2AO00443 1686 aa28.97■■■□□ 2.23
SOX18-201ENST00000340356 OVOS2A0A0J9YW53 1432 aa28.97■■■□□ 2.23
SOX18-201ENST00000340356 OVOS2Q6IE36 1432 aa28.97■■■□□ 2.23
SOX18-201ENST00000340356 CADPS2Q86UW7 1296 aa28.96■■■□□ 2.23
SOX18-201ENST00000340356 FOXO3O43524 673 aa28.95■■■□□ 2.23
SOX18-201ENST00000340356 ADAMTS8Q9UP79 889 aa28.95■■■□□ 2.23
SOX18-201ENST00000340356 SHPRHQ149N8 1683 aa28.93■■■□□ 2.22
SOX18-201ENST00000340356 PAK3O75914 559 aaPredicted RBP28.93■■■□□ 2.22
SOX18-201ENST00000340356 XPCQ01831 940 aaPredicted RBP28.93■■■□□ 2.22
SOX18-201ENST00000340356 PSME1Q06323 249 aa28.93■■■□□ 2.22
SOX18-201ENST00000340356 WDR43Q15061 677 aaKnown RBP eCLIP28.93■■■□□ 2.22
SOX18-201ENST00000340356 POLKQ9UBT6 870 aa28.92■■■□□ 2.22
SOX18-201ENST00000340356 GTF3C3Q9Y5Q9 886 aa28.92■■■□□ 2.22
SOX18-201ENST00000340356 KIF1AQ12756 1690 aa28.91■■■□□ 2.22
SOX18-201ENST00000340356 MAP2P11137 1827 aaKnown RBP28.91■■■□□ 2.22
SOX18-201ENST00000340356 NUTM2GQ5VZR2 741 aa28.91■■■□□ 2.22
SOX18-201ENST00000340356 CFAP53Q96M91 514 aa28.9■■■□□ 2.22
SOX18-201ENST00000340356 EMILIN1Q9Y6C2 1016 aa28.9■■■□□ 2.22
SOX18-201ENST00000340356 BLMP54132 1417 aaPredicted RBP28.89■■■□□ 2.22
SOX18-201ENST00000340356 RRS1Q15050 365 aaKnown RBP28.89■■■□□ 2.21
SOX18-201ENST00000340356 AATKQ6ZMQ8 1374 aa28.89■■■□□ 2.21
SOX18-201ENST00000340356 PPM1GO15355 546 aaPredicted RBP28.88■■■□□ 2.21
SOX18-201ENST00000340356 USP31Q70CQ4 1352 aa28.88■■■□□ 2.21
SOX18-201ENST00000340356 COL3A1P02461 1466 aaPredicted RBP28.88■■■□□ 2.21
SOX18-201ENST00000340356 MARF1Q9Y4F3 1742 aaKnown RBP28.87■■■□□ 2.21
SOX18-201ENST00000340356 ABTB2Q8N961 1025 aa28.87■■■□□ 2.21
SOX18-201ENST00000340356 DDX17Q92841 729 aaKnown RBP28.87■■■□□ 2.21
SOX18-201ENST00000340356 SOX12O15370 315 aa28.87■■■□□ 2.21
SOX18-201ENST00000340356 NLRP6P59044 892 aa28.87■■■□□ 2.21
SOX18-201ENST00000340356 PNPLA6Q8IY17 1366 aa28.84■■■□□ 2.21
SOX18-201ENST00000340356 SMG6Q86US8 1419 aaKnown RBP28.84■■■□□ 2.21
SOX18-201ENST00000340356 KRT28Q7Z3Y7 464 aa28.83■■■□□ 2.21
SOX18-201ENST00000340356 ZBED9Q6R2W3 1325 aa28.83■■■□□ 2.21
SOX18-201ENST00000340356 TRPM3Q9HCF6 1732 aaPredicted RBP28.83■■■□□ 2.21
SOX18-201ENST00000340356 INSRP06213 1382 aa28.83■■■□□ 2.21
SOX18-201ENST00000340356 LTBP4Q8N2S1 1624 aa28.82■■■□□ 2.2
SOX18-201ENST00000340356 USP54Q70EL1 1684 aa28.82■■■□□ 2.2
SOX18-201ENST00000340356 CCDC146Q8IYE0 955 aa28.81■■■□□ 2.2
SOX18-201ENST00000340356 SLAIN2Q9P270 581 aa28.8■■■□□ 2.2
SOX18-201ENST00000340356 BRINP3Q76B58 766 aa28.8■■■□□ 2.2
SOX18-201ENST00000340356 CDK12Q9NYV4 1490 aaPredicted RBP28.78■■■□□ 2.2
SOX18-201ENST00000340356 SALL2Q9Y467 1007 aaPredicted RBP28.78■■■□□ 2.2
SOX18-201ENST00000340356 PEAK1Q9H792 1746 aa28.77■■■□□ 2.2
SOX18-201ENST00000340356 DIAPH1O60610 1272 aaKnown RBP28.76■■■□□ 2.2
SOX18-201ENST00000340356 U2SURPO15042 1029 aaKnown RBP28.75■■■□□ 2.19
SOX18-201ENST00000340356 LMOD2Q6P5Q4 547 aa28.75■■■□□ 2.19
SOX18-201ENST00000340356 U2AF1L5P0DN76 240 aaPredicted RBP28.74■■■□□ 2.19
SOX18-201ENST00000340356 U2AF1Q01081 240 aaKnown RBP eCLIP28.74■■■□□ 2.19
SOX18-201ENST00000340356 AEBP2Q6ZN18 517 aaPredicted RBP28.74■■■□□ 2.19
SOX18-201ENST00000340356 MAP3K19Q56UN5 1328 aa28.74■■■□□ 2.19
SOX18-201ENST00000340356 NPHP3Q7Z494 1330 aa28.74■■■□□ 2.19
SOX18-201ENST00000340356 PLEKHG5O94827 1062 aa28.73■■■□□ 2.19
SOX18-201ENST00000340356 PXDNQ92626 1479 aa28.72■■■□□ 2.19
SOX18-201ENST00000340356 ALS2Q96Q42 1657 aa28.72■■■□□ 2.19
SOX18-201ENST00000340356 NUDCQ9Y266 331 aa28.72■■■□□ 2.19
SOX18-201ENST00000340356 IL13P35225 146 aa28.69■■■□□ 2.18
SOX18-201ENST00000340356 HSP90AB2PQ58FF8 381 aa28.68■■■□□ 2.18
SOX18-201ENST00000340356 NFAT5O94916 1531 aa28.68■■■□□ 2.18
SOX18-201ENST00000340356 APAF1O14727 1248 aa28.68■■■□□ 2.18
SOX18-201ENST00000340356 SBNO1A3KN83 1393 aa28.67■■■□□ 2.18
SOX18-201ENST00000340356 SLIT3O75094 1523 aa28.64■■■□□ 2.18
SOX18-201ENST00000340356 AMPHP49418 695 aa28.64■■■□□ 2.18
SOX18-201ENST00000340356 EIF4A2Q14240 407 aaKnown RBP28.64■■■□□ 2.18
SOX18-201ENST00000340356 RUNDC1Q96C34 613 aa28.64■■■□□ 2.18
SOX18-201ENST00000340356 TNS3Q68CZ2 1445 aa28.64■■■□□ 2.18
SOX18-201ENST00000340356 USP19O94966 1318 aa28.63■■■□□ 2.17
SOX18-201ENST00000340356 FLT4P35916 1363 aa28.63■■■□□ 2.17
SOX18-201ENST00000340356 LTN1O94822 1766 aa28.63■■■□□ 2.17
SOX18-201ENST00000340356 MED1Q15648 1581 aaPredicted RBP28.62■■■□□ 2.17
SOX18-201ENST00000340356 GCP02774 474 aa28.62■■■□□ 2.17
SOX18-201ENST00000340356 SPATA31A3Q5VYP0 1347 aa28.61■■■□□ 2.17
SOX18-201ENST00000340356 KCNH5Q8NCM2 988 aa28.61■■■□□ 2.17
SOX18-201ENST00000340356 PLEKHF1Q96S99 279 aa28.61■■■□□ 2.17
SOX18-201ENST00000340356 IQSEC2Q5JU85 1478 aa28.6■■■□□ 2.17
SOX18-201ENST00000340356 HMOX1P09601 288 aa28.6■■■□□ 2.17
SOX18-201ENST00000340356 SOS2Q07890 1332 aaPredicted RBP28.59■■■□□ 2.17
SOX18-201ENST00000340356 HOXC9P31274 260 aa28.59■■■□□ 2.17
SOX18-201ENST00000340356 TCP11L2Q8N4U5 519 aa28.59■■■□□ 2.17
SOX18-201ENST00000340356 RRP7AQ9Y3A4 280 aaKnown RBP28.59■■■□□ 2.17
SOX18-201ENST00000340356 NHSL1Q5SYE7 1610 aa28.58■■■□□ 2.17
SOX18-201ENST00000340356 ZBTB7CA1YPR0 619 aa28.58■■■□□ 2.17
SOX18-201ENST00000340356 RSPH6AQ9H0K4 717 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms