RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 NUP133Q8WUM0 1156 aa14.06□□□□□ -0.16
SHANK2-201ENST00000338508 NINLQ9Y2I6 1382 aa14.06□□□□□ -0.16
SHANK2-201ENST00000338508 PIP4K2BP78356 416 aa14.06□□□□□ -0.16
SHANK2-201ENST00000338508 DDX54Q8TDD1 881 aaKnown RBP14.05□□□□□ -0.16
SHANK2-201ENST00000338508 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
SHANK2-201ENST00000338508 HSP90AB4PQ58FF6 505 aa14.05□□□□□ -0.16
SHANK2-201ENST00000338508 CCDC144AA2RUR9 1427 aa14.05□□□□□ -0.16
SHANK2-201ENST00000338508 PHLDB1Q86UU1 1377 aa14.05□□□□□ -0.16
SHANK2-201ENST00000338508 PANK1Q8TE04 598 aa14.05□□□□□ -0.16
SHANK2-201ENST00000338508 CHMP5Q9NZZ3 219 aa14.05□□□□□ -0.16
SHANK2-201ENST00000338508 KINO60870 393 aaKnown RBP14.05□□□□□ -0.16
SHANK2-201ENST00000338508 PAXIP1Q6ZW49 1069 aaPredicted RBP14.05□□□□□ -0.16
SHANK2-201ENST00000338508 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.05□□□□□ -0.16
SHANK2-201ENST00000338508 C1orf115Q9H7X2 142 aa14.04□□□□□ -0.16
SHANK2-201ENST00000338508 ERLIN2O94905 339 aa14.04□□□□□ -0.16
SHANK2-201ENST00000338508 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.04□□□□□ -0.16
SHANK2-201ENST00000338508 PSMD1Q99460 953 aa14.04□□□□□ -0.16
SHANK2-201ENST00000338508 PSMA5P28066 241 aa14.04□□□□□ -0.16
SHANK2-201ENST00000338508 SURF6O75683 361 aaKnown RBP14.04□□□□□ -0.16
SHANK2-201ENST00000338508 CAVIN1Q6NZI2 390 aaKnown RBP14.04□□□□□ -0.16
SHANK2-201ENST00000338508 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
SHANK2-201ENST00000338508 C22orf23Q9BZE7 217 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 CCDC181Q5TID7 509 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 SERPINC1P01008 464 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 NUCB2P80303 420 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 ERCC4Q92889 916 aaPredicted RBP14.03□□□□□ -0.16
SHANK2-201ENST00000338508 ABTB2Q8N961 1025 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 GGNBP2Q9H3C7 697 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 MYL6BP14649 208 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 ESCO1Q5FWF5 840 aa14.03□□□□□ -0.16
SHANK2-201ENST00000338508 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.16
SHANK2-201ENST00000338508 GOLGA6L10A6NI86 522 aa14.02□□□□□ -0.16
SHANK2-201ENST00000338508 NASPP49321 788 aaPredicted RBP14.02□□□□□ -0.16
SHANK2-201ENST00000338508 BICDL1Q6ZP65 573 aa14.02□□□□□ -0.16
SHANK2-201ENST00000338508 CABP2Q9NPB3 220 aa14.02□□□□□ -0.16
SHANK2-201ENST00000338508 USP5P45974 858 aa14.02□□□□□ -0.17
SHANK2-201ENST00000338508 NLRP6P59044 892 aa14.02□□□□□ -0.17
SHANK2-201ENST00000338508 FIBPO43427 364 aa14.02□□□□□ -0.17
SHANK2-201ENST00000338508 TTC16Q8NEE8 873 aa14.02□□□□□ -0.17
SHANK2-201ENST00000338508 TAF3Q5VWG9 929 aa14.02□□□□□ -0.17
SHANK2-201ENST00000338508 ZNHIT6Q9NWK9 470 aaKnown RBP14.02□□□□□ -0.17
SHANK2-201ENST00000338508 ANKRD18AQ8IVF6 992 aa14.01□□□□□ -0.17
SHANK2-201ENST00000338508 ZNF76P36508 570 aa14.01□□□□□ -0.17
SHANK2-201ENST00000338508 RBM10P98175 930 aaKnown RBP14.01□□□□□ -0.17
SHANK2-201ENST00000338508 STK38Q15208 465 aa14□□□□□ -0.17
SHANK2-201ENST00000338508 CWC15Q9P013 229 aaKnown RBP14□□□□□ -0.17
SHANK2-201ENST00000338508 WASHC2AQ641Q2 1341 aa14□□□□□ -0.17
SHANK2-201ENST00000338508 FMN1Q68DA7 1419 aa14□□□□□ -0.17
SHANK2-201ENST00000338508 CLASRPQ8N2M8 674 aaKnown RBP14□□□□□ -0.17
SHANK2-201ENST00000338508 CCDC69A6NI79 296 aa14□□□□□ -0.17
SHANK2-201ENST00000338508 GBP2P32456 591 aaPredicted RBP14□□□□□ -0.17
SHANK2-201ENST00000338508 LEKR1Q6ZMV7 388 aa13.99□□□□□ -0.17
SHANK2-201ENST00000338508 FKBP4Q02790 459 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHANK2-201ENST00000338508 LRRFIP2Q9Y608 721 aaKnown RBP13.99□□□□□ -0.17
SHANK2-201ENST00000338508 CCDC158Q5M9N0 1113 aa13.99□□□□□ -0.17
SHANK2-201ENST00000338508 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
SHANK2-201ENST00000338508 HMGN5P82970 282 aaKnown RBP13.99□□□□□ -0.17
SHANK2-201ENST00000338508 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
SHANK2-201ENST00000338508 CCDC85AQ96PX6 553 aaPredicted RBP13.99□□□□□ -0.17
SHANK2-201ENST00000338508 CCDC39Q9UFE4 941 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 GNL3LQ9NVN8 582 aaKnown RBP13.98□□□□□ -0.17
SHANK2-201ENST00000338508 NEK4P51957 841 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 SCLT1Q96NL6 688 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 SOGA3Q5TF21 947 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 GNAI1P63096 354 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 PPFIBP1Q86W92 1011 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 TMEM87AQ8NBN3 555 aa13.98□□□□□ -0.17
SHANK2-201ENST00000338508 UACAQ9BZF9 1416 aa13.97□□□□□ -0.17
SHANK2-201ENST00000338508 NFKBIBQ15653 356 aa13.97□□□□□ -0.17
SHANK2-201ENST00000338508 MAPK8IP2Q13387 824 aaPredicted RBP13.97□□□□□ -0.17
SHANK2-201ENST00000338508 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
SHANK2-201ENST00000338508 EZRP15311 586 aaKnown RBP13.96□□□□□ -0.17
SHANK2-201ENST00000338508 ME1P48163 572 aa13.96□□□□□ -0.17
SHANK2-201ENST00000338508 WDR78Q5VTH9 848 aa13.96□□□□□ -0.17
SHANK2-201ENST00000338508 TMEM132EQ6IEE7 984 aa13.96□□□□□ -0.17
SHANK2-201ENST00000338508 ERC1Q8IUD2 1116 aa13.96□□□□□ -0.17
SHANK2-201ENST00000338508 CDC45O75419 566 aa13.96□□□□□ -0.18
SHANK2-201ENST00000338508 MPHOSPH8Q99549 860 aa13.96□□□□□ -0.18
SHANK2-201ENST00000338508 STIM1Q13586 685 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 CCDC112Q8NEF3 446 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 TSPY26PQ9H489 355 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 CABP4P57796 275 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 ZNF396Q96N95 335 aaPredicted RBP13.95□□□□□ -0.18
SHANK2-201ENST00000338508 KIAA0754O94854 1291 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 TRMT1LQ7Z2T5 733 aaKnown RBP13.95□□□□□ -0.18
SHANK2-201ENST00000338508 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 CCDC30Q5VVM6 783 aa13.95□□□□□ -0.18
SHANK2-201ENST00000338508 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
SHANK2-201ENST00000338508 ANAPC15P60006 121 aa13.94□□□□□ -0.18
SHANK2-201ENST00000338508 TTLL12Q14166 644 aaPredicted RBP13.94□□□□□ -0.18
SHANK2-201ENST00000338508 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.94□□□□□ -0.18
SHANK2-201ENST00000338508 GOLGA6L10A0A0M3HER8 536 aa13.94□□□□□ -0.18
SHANK2-201ENST00000338508 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
SHANK2-201ENST00000338508 CCDC113Q9H0I3 377 aa13.93□□□□□ -0.18
SHANK2-201ENST00000338508 USP47Q96K76 1375 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms