RNA–Protein interactions for RNA: ENST00000338502.8

SPRED3-201, Transcript of sprouty related EVH1 domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED3, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-201ENST00000338502 SAFBQ15424 915 aaKnown RBP eCLIP21.61■■□□□ 1.05
SPRED3-201ENST00000338502 ATF3P18847 181 aa21.61■■□□□ 1.05
SPRED3-201ENST00000338502 PLEKHO1Q53GL0 409 aaPredicted RBP21.61■■□□□ 1.05
SPRED3-201ENST00000338502 MAP3K1Q13233 1512 aa21.61■■□□□ 1.05
SPRED3-201ENST00000338502 GPRASP1Q5JY77 1395 aa21.61■■□□□ 1.05
SPRED3-201ENST00000338502 CCDC47Q96A33 483 aaKnown RBP21.61■■□□□ 1.05
SPRED3-201ENST00000338502 A0A0U1RQG5 324 aaPredicted RBP21.61■■□□□ 1.05
SPRED3-201ENST00000338502 CCT4P50991 539 aaKnown RBP21.61■■□□□ 1.05
SPRED3-201ENST00000338502 ERICH2A1L162 156 aa21.6■■□□□ 1.05
SPRED3-201ENST00000338502 VPS53Q5VIR6 699 aa21.6■■□□□ 1.05
SPRED3-201ENST00000338502 VPS37DQ86XT2 251 aa21.6■■□□□ 1.05
SPRED3-201ENST00000338502 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
SPRED3-201ENST00000338502 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
SPRED3-201ENST00000338502 SYTL4Q96C24 671 aaPredicted RBP21.6■■□□□ 1.05
SPRED3-201ENST00000338502 HIP1O00291 1037 aa21.59■■□□□ 1.05
SPRED3-201ENST00000338502 WASHC4Q2M389 1173 aa21.59■■□□□ 1.05
SPRED3-201ENST00000338502 HDGFL1Q5TGJ6 251 aa21.59■■□□□ 1.05
SPRED3-201ENST00000338502 FCHSD2O94868 740 aa21.59■■□□□ 1.05
SPRED3-201ENST00000338502 WWC1Q8IX03 1113 aa21.59■■□□□ 1.05
SPRED3-201ENST00000338502 GPS2Q13227 327 aa21.59■■□□□ 1.05
SPRED3-201ENST00000338502 CAVIN1Q6NZI2 390 aaKnown RBP21.59■■□□□ 1.05
SPRED3-201ENST00000338502 HOMER1Q86YM7 354 aa21.59■■□□□ 1.05
SPRED3-201ENST00000338502 FAM13BQ9NYF5 915 aa21.58■■□□□ 1.05
SPRED3-201ENST00000338502 ERC1Q8IUD2 1116 aa21.58■■□□□ 1.05
SPRED3-201ENST00000338502 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.04
SPRED3-201ENST00000338502 AMER1Q5JTC6 1135 aaPredicted RBP21.57■■□□□ 1.04
SPRED3-201ENST00000338502 C11orf95C9JLR9 678 aaPredicted RBP21.57■■□□□ 1.04
SPRED3-201ENST00000338502 RNF214Q8ND24 703 aa21.57■■□□□ 1.04
SPRED3-201ENST00000338502 CWC22Q9HCG8 908 aaKnown RBP21.57■■□□□ 1.04
SPRED3-201ENST00000338502 CCDC39Q9UFE4 941 aa21.56■■□□□ 1.04
SPRED3-201ENST00000338502 CHD1LQ86WJ1 897 aa21.56■■□□□ 1.04
SPRED3-201ENST00000338502 SDF4Q9BRK5 362 aa21.56■■□□□ 1.04
SPRED3-201ENST00000338502 CCDC70Q6NSX1 233 aa21.56■■□□□ 1.04
SPRED3-201ENST00000338502 LETM1O95202 739 aaPredicted RBP21.55■■□□□ 1.04
SPRED3-201ENST00000338502 PRPF40AO75400 957 aaKnown RBP21.54■■□□□ 1.04
SPRED3-201ENST00000338502 RTEL1-TNFRSF6BF6WH68 1400 aa21.54■■□□□ 1.04
SPRED3-201ENST00000338502 IFT57Q9NWB7 429 aa21.54■■□□□ 1.04
SPRED3-201ENST00000338502 LRRCC1Q9C099 1032 aa21.53■■□□□ 1.04
SPRED3-201ENST00000338502 NAT10Q9H0A0 1025 aaKnown RBP21.53■■□□□ 1.04
SPRED3-201ENST00000338502 CCDC141Q6ZP82 1450 aa21.53■■□□□ 1.04
SPRED3-201ENST00000338502 K7ELQ4 463 aaPredicted RBP21.53■■□□□ 1.04
SPRED3-201ENST00000338502 TMPOP42166 694 aaKnown RBP21.53■■□□□ 1.04
SPRED3-201ENST00000338502 SRCIN1Q9C0H9 1055 aa21.53■■□□□ 1.04
SPRED3-201ENST00000338502 PCF11O94913 1555 aaKnown RBP21.52■■□□□ 1.04
SPRED3-201ENST00000338502 CIZ1Q9ULV3 898 aaPredicted RBP21.52■■□□□ 1.04
SPRED3-201ENST00000338502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.52■■□□□ 1.03
SPRED3-201ENST00000338502 ABCC5O15440 1437 aa21.52■■□□□ 1.03
SPRED3-201ENST00000338502 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.03
SPRED3-201ENST00000338502 FOSBP53539 338 aa21.51■■□□□ 1.03
SPRED3-201ENST00000338502 RPAP2Q8IXW5 612 aaPredicted RBP21.51■■□□□ 1.03
SPRED3-201ENST00000338502 NSD3Q9BZ95 1437 aa21.51■■□□□ 1.03
SPRED3-201ENST00000338502 NFE2L2Q16236 605 aa21.5■■□□□ 1.03
SPRED3-201ENST00000338502 THEMISQ8N1K5 641 aaPredicted RBP21.5■■□□□ 1.03
SPRED3-201ENST00000338502 PCMTD1Q96MG8 357 aaPredicted RBP21.5■■□□□ 1.03
SPRED3-201ENST00000338502 ESCO1Q5FWF5 840 aa21.5■■□□□ 1.03
SPRED3-201ENST00000338502 DHX16O60231 1041 aaKnown RBP21.49■■□□□ 1.03
SPRED3-201ENST00000338502 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
SPRED3-201ENST00000338502 CCDC27Q2M243 656 aa21.49■■□□□ 1.03
SPRED3-201ENST00000338502 BRPF3Q9ULD4 1205 aa21.49■■□□□ 1.03
SPRED3-201ENST00000338502 CCDC61Q9Y6R9 512 aa21.48■■□□□ 1.03
SPRED3-201ENST00000338502 IQGAP2Q13576 1575 aa21.48■■□□□ 1.03
SPRED3-201ENST00000338502 MAGI1Q96QZ7 1491 aaPredicted RBP21.48■■□□□ 1.03
SPRED3-201ENST00000338502 KINO60870 393 aaKnown RBP21.48■■□□□ 1.03
SPRED3-201ENST00000338502 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
SPRED3-201ENST00000338502 TSPY26PQ9H489 355 aa21.48■■□□□ 1.03
SPRED3-201ENST00000338502 FIBPO43427 364 aa21.47■■□□□ 1.03
SPRED3-201ENST00000338502 TBC1D2BQ9UPU7 963 aa21.47■■□□□ 1.03
SPRED3-201ENST00000338502 CCDC173Q0VFZ6 552 aa21.47■■□□□ 1.03
SPRED3-201ENST00000338502 NCOA1Q15788 1441 aa21.47■■□□□ 1.03
SPRED3-201ENST00000338502 FBXW7Q969H0 707 aa21.47■■□□□ 1.03
SPRED3-201ENST00000338502 XBP1P17861 261 aa21.47■■□□□ 1.03
SPRED3-201ENST00000338502 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
SPRED3-201ENST00000338502 NCBP3Q53F19 620 aaKnown RBP21.46■■□□□ 1.03
SPRED3-201ENST00000338502 ZNF530Q6P9A1 599 aaPredicted RBP21.46■■□□□ 1.03
SPRED3-201ENST00000338502 DNAJC2Q99543 621 aaKnown RBP21.46■■□□□ 1.03
SPRED3-201ENST00000338502 WDR33Q9C0J8 1336 aaKnown RBP21.46■■□□□ 1.03
SPRED3-201ENST00000338502 MCM4P33991 863 aa21.46■■□□□ 1.03
SPRED3-201ENST00000338502 TRIM5Q9C035 493 aa21.46■■□□□ 1.03
SPRED3-201ENST00000338502 R3HCC1Q9Y3T6 440 aaKnown RBP21.46■■□□□ 1.03
SPRED3-201ENST00000338502 SART3Q15020 963 aaKnown RBP21.45■■□□□ 1.03
SPRED3-201ENST00000338502 TMEM57Q8N5G2 664 aa21.45■■□□□ 1.03
SPRED3-201ENST00000338502 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
SPRED3-201ENST00000338502 TATP17735 454 aaPredicted RBP21.45■■□□□ 1.02
SPRED3-201ENST00000338502 OLFM4Q6UX06 510 aa21.45■■□□□ 1.02
SPRED3-201ENST00000338502 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.02
SPRED3-201ENST00000338502 PTPN23Q9H3S7 1636 aa21.45■■□□□ 1.02
SPRED3-201ENST00000338502 PDE4CQ08493 712 aa21.45■■□□□ 1.02
SPRED3-201ENST00000338502 TRIM34Q9BYJ4 488 aa21.44■■□□□ 1.02
SPRED3-201ENST00000338502 RARSP54136 660 aaKnown RBP21.44■■□□□ 1.02
SPRED3-201ENST00000338502 ANKRD1Q15327 319 aa21.44■■□□□ 1.02
SPRED3-201ENST00000338502 MNS1Q8NEH6 495 aa21.44■■□□□ 1.02
SPRED3-201ENST00000338502 BRMS1Q9HCU9 246 aa21.44■■□□□ 1.02
SPRED3-201ENST00000338502 MTERF4Q7Z6M4 381 aaKnown RBP21.44■■□□□ 1.02
SPRED3-201ENST00000338502 ABCC11Q96J66 1382 aa21.43■■□□□ 1.02
SPRED3-201ENST00000338502 MAP7D2Q96T17 732 aa21.43■■□□□ 1.02
SPRED3-201ENST00000338502 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
SPRED3-201ENST00000338502 AEBP1Q8IUX7 1158 aa21.43■■□□□ 1.02
SPRED3-201ENST00000338502 ARGLU1Q9NWB6 273 aaPredicted RBP21.43■■□□□ 1.02
SPRED3-201ENST00000338502 RPRD2Q5VT52 1461 aaKnown RBP21.43■■□□□ 1.02
SPRED3-201ENST00000338502 RAD21O60216 631 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms